RNA–Protein interactions for RNA: ENST00000447024.5

SMARCE1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-206ENST00000447024 MFAP3P55082 362 aa8.11□□□□□ -1.11
SMARCE1-206ENST00000447024 STX17P56962 302 aa8.11□□□□□ -1.11
SMARCE1-206ENST00000447024 COG7P83436 770 aa8.11□□□□□ -1.11
SMARCE1-206ENST00000447024 PM20D1Q6GTS8 502 aa8.11□□□□□ -1.11
SMARCE1-206ENST00000447024 GBP6Q6ZN66 633 aa8.11□□□□□ -1.11
SMARCE1-206ENST00000447024 RBM43Q6ZSC3 357 aaKnown RBP8.11□□□□□ -1.11
SMARCE1-206ENST00000447024 HTR3DQ70Z44 454 aa8.11□□□□□ -1.11
SMARCE1-206ENST00000447024 PPM1KQ8N3J5 372 aa8.11□□□□□ -1.11
SMARCE1-206ENST00000447024 NELL1Q92832 810 aa8.11□□□□□ -1.11
SMARCE1-206ENST00000447024 EXTL1Q92935 676 aa8.11□□□□□ -1.11
SMARCE1-206ENST00000447024 MRRFQ96E11 262 aaKnown RBP8.11□□□□□ -1.11
SMARCE1-206ENST00000447024 CNOT6LQ96LI5 555 aaKnown RBP8.11□□□□□ -1.11
SMARCE1-206ENST00000447024 SLC22A12Q96S37 553 aa8.11□□□□□ -1.11
SMARCE1-206ENST00000447024 DCLK3Q9C098 648 aa8.11□□□□□ -1.11
SMARCE1-206ENST00000447024 EPN3Q9H201 632 aa8.11□□□□□ -1.11
SMARCE1-206ENST00000447024 LMAN1LQ9HAT1 526 aa8.11□□□□□ -1.11
SMARCE1-206ENST00000447024 HPS4Q9NQG7 708 aa8.11□□□□□ -1.11
SMARCE1-206ENST00000447024 PRMT8Q9NR22 394 aaPredicted RBP8.11□□□□□ -1.11
SMARCE1-206ENST00000447024 OLA1Q9NTK5 396 aaKnown RBP8.11□□□□□ -1.11
SMARCE1-206ENST00000447024 GTSE1Q9NYZ3 720 aa8.11□□□□□ -1.11
SMARCE1-206ENST00000447024 CHORDC1Q9UHD1 332 aaPredicted RBP8.11□□□□□ -1.11
SMARCE1-206ENST00000447024 ZNF510Q9Y2H8 683 aa8.11□□□□□ -1.11
SMARCE1-206ENST00000447024 DAAM1Q9Y4D1 1078 aa8.11□□□□□ -1.11
SMARCE1-206ENST00000447024 CPQQ9Y646 472 aa8.11□□□□□ -1.11
SMARCE1-206ENST00000447024 OTOGLQ3ZCN5 2332 aa8.11□□□□□ -1.11
SMARCE1-206ENST00000447024 A0A1W2PQU0 124 aa8.1□□□□□ -1.11
SMARCE1-206ENST00000447024 AGRPO00253 132 aa8.1□□□□□ -1.11
SMARCE1-206ENST00000447024 O00370 1275 aa8.1□□□□□ -1.11
SMARCE1-206ENST00000447024 DLX3O60479 287 aa8.1□□□□□ -1.11
SMARCE1-206ENST00000447024 BEST1O76090 585 aa8.1□□□□□ -1.11
SMARCE1-206ENST00000447024 SP9P0CG40 484 aa8.1□□□□□ -1.11
SMARCE1-206ENST00000447024 MBL2P11226 248 aaPredicted RBP8.1□□□□□ -1.11
SMARCE1-206ENST00000447024 CD72P21854 359 aa8.1□□□□□ -1.11
SMARCE1-206ENST00000447024 EEF1GP26641 437 aaKnown RBP8.1□□□□□ -1.11
SMARCE1-206ENST00000447024 GJA4P35212 333 aa8.1□□□□□ -1.11
SMARCE1-206ENST00000447024 CXCL12P48061 93 aa8.1□□□□□ -1.11
SMARCE1-206ENST00000447024 ZNF132P52740 706 aa8.1□□□□□ -1.11
SMARCE1-206ENST00000447024 E2F5Q15329 346 aa8.1□□□□□ -1.11
SMARCE1-206ENST00000447024 MAN2A1Q16706 1144 aa8.1□□□□□ -1.11
SMARCE1-206ENST00000447024 EXOC3L4Q17RC7 722 aa8.1□□□□□ -1.11
SMARCE1-206ENST00000447024 TMEM270Q6UE05 265 aa8.1□□□□□ -1.11
SMARCE1-206ENST00000447024 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.1□□□□□ -1.11
SMARCE1-206ENST00000447024 IRGQQ8WZA9 623 aa8.1□□□□□ -1.11
SMARCE1-206ENST00000447024 ZFYVE19Q96K21 471 aa8.1□□□□□ -1.11
SMARCE1-206ENST00000447024 HSFY1Q96LI6 401 aa8.1□□□□□ -1.11
SMARCE1-206ENST00000447024 P2RY13Q9BPV8 354 aa8.1□□□□□ -1.11
SMARCE1-206ENST00000447024 TRIM62Q9BVG3 475 aa8.1□□□□□ -1.11
SMARCE1-206ENST00000447024 NACA2Q9H009 215 aa8.1□□□□□ -1.11
SMARCE1-206ENST00000447024 INTS2Q9H0H0 1204 aaKnown RBP8.1□□□□□ -1.11
SMARCE1-206ENST00000447024 EBF3Q9H4W6 596 aa8.1□□□□□ -1.11
SMARCE1-206ENST00000447024 LRRC4Q9HBW1 653 aa8.1□□□□□ -1.11
SMARCE1-206ENST00000447024 CNGB3Q9NQW8 809 aa8.1□□□□□ -1.11
SMARCE1-206ENST00000447024 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.1□□□□□ -1.11
SMARCE1-206ENST00000447024 TMEM51Q9NW97 253 aa8.1□□□□□ -1.11
SMARCE1-206ENST00000447024 ZSCAN32Q9NX65 697 aa8.1□□□□□ -1.11
SMARCE1-206ENST00000447024 C11orf21Q9P2W6 132 aa8.1□□□□□ -1.11
SMARCE1-206ENST00000447024 LSM7Q9UK45 103 aaKnown RBP8.1□□□□□ -1.11
SMARCE1-206ENST00000447024 NDRG2Q9UN36 371 aaKnown RBP8.1□□□□□ -1.11
SMARCE1-206ENST00000447024 SH3BP1Q9Y3L3 701 aa8.1□□□□□ -1.11
SMARCE1-206ENST00000447024 MTF2Q9Y483 593 aaPredicted RBP8.1□□□□□ -1.11
SMARCE1-206ENST00000447024 HOXC11O43248 304 aaPredicted RBP8.09□□□□□ -1.11
SMARCE1-206ENST00000447024 MED7O43513 233 aa8.09□□□□□ -1.11
SMARCE1-206ENST00000447024 GJB6O95452 261 aa8.09□□□□□ -1.11
SMARCE1-206ENST00000447024 ZBED1O96006 694 aa8.09□□□□□ -1.11
SMARCE1-206ENST00000447024 TPM2P07951 284 aa8.09□□□□□ -1.11
SMARCE1-206ENST00000447024 CD19P15391 556 aa8.09□□□□□ -1.11
SMARCE1-206ENST00000447024 ACADSBP45954 432 aa8.09□□□□□ -1.11
SMARCE1-206ENST00000447024 MTIF2P46199 727 aaKnown RBP8.09□□□□□ -1.11
SMARCE1-206ENST00000447024 MRE11P49959 708 aa8.09□□□□□ -1.11
SMARCE1-206ENST00000447024 SNX16P57768 344 aa8.09□□□□□ -1.11
SMARCE1-206ENST00000447024 BPIFB4P59827 614 aa8.09□□□□□ -1.11
SMARCE1-206ENST00000447024 RAC3P60763 192 aa8.09□□□□□ -1.11
SMARCE1-206ENST00000447024 GAD2Q05329 585 aa8.09□□□□□ -1.11
SMARCE1-206ENST00000447024 IFRD2Q12894 506 aaPredicted RBP8.09□□□□□ -1.11
SMARCE1-206ENST00000447024 MTAPQ13126 283 aa8.09□□□□□ -1.11
SMARCE1-206ENST00000447024 DPCR1Q3MIW9 517 aa8.09□□□□□ -1.11
SMARCE1-206ENST00000447024 TRIM65Q6PJ69 517 aa8.09□□□□□ -1.11
SMARCE1-206ENST00000447024 BEND5Q7L4P6 421 aa8.09□□□□□ -1.11
SMARCE1-206ENST00000447024 PIGZQ86VD9 579 aa8.09□□□□□ -1.11
SMARCE1-206ENST00000447024 TTC30AQ86WT1 665 aa8.09□□□□□ -1.11
SMARCE1-206ENST00000447024 MAML2Q8IZL2 1156 aaPredicted RBP8.09□□□□□ -1.11
SMARCE1-206ENST00000447024 ZBTB44Q8NCP5 570 aa8.09□□□□□ -1.11
SMARCE1-206ENST00000447024 SLC35F5Q8WV83 523 aa8.09□□□□□ -1.11
SMARCE1-206ENST00000447024 ATRIPQ8WXE1 791 aa8.09□□□□□ -1.11
SMARCE1-206ENST00000447024 CD101Q93033 1021 aa8.09□□□□□ -1.11
SMARCE1-206ENST00000447024 NKD2Q969F2 451 aaPredicted RBP8.09□□□□□ -1.11
SMARCE1-206ENST00000447024 CHFRQ96EP1 664 aa8.09□□□□□ -1.11
SMARCE1-206ENST00000447024 MED15Q96RN5 788 aa8.09□□□□□ -1.11
SMARCE1-206ENST00000447024 ANO10Q9NW15 660 aa8.09□□□□□ -1.11
SMARCE1-206ENST00000447024 CFAP97Q9P2B7 532 aa8.09□□□□□ -1.11
SMARCE1-206ENST00000447024 WDR35Q9P2L0 1181 aa8.09□□□□□ -1.11
SMARCE1-206ENST00000447024 TSPAN16Q9UKR8 245 aa8.09□□□□□ -1.11
SMARCE1-206ENST00000447024 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.09□□□□□ -1.11
SMARCE1-206ENST00000447024 WNT6Q9Y6F9 365 aa8.09□□□□□ -1.11
SMARCE1-206ENST00000447024 GPR179Q6PRD1 2367 aa8.08□□□□□ -1.12
SMARCE1-206ENST00000447024 MYO18AQ92614 2054 aaKnown RBP8.08□□□□□ -1.12
SMARCE1-206ENST00000447024 LATS1O95835 1130 aa8.08□□□□□ -1.12
SMARCE1-206ENST00000447024 RARGP13631 454 aa8.08□□□□□ -1.12
SMARCE1-206ENST00000447024 ARSAP15289 507 aa8.08□□□□□ -1.12
SMARCE1-206ENST00000447024 PTMSP20962 102 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms