RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 CLNKQ7Z7G1 428 aa17.64■□□□□ 0.41
SMC6-206ENST00000446852 DDX53Q86TM3 631 aaKnown RBP17.64■□□□□ 0.41
SMC6-206ENST00000446852 KIF2BQ8N4N8 673 aa17.64■□□□□ 0.41
SMC6-206ENST00000446852 RANBP9Q96S59 729 aa17.64■□□□□ 0.41
SMC6-206ENST00000446852 KLF16Q9BXK1 252 aaPredicted RBP17.64■□□□□ 0.41
SMC6-206ENST00000446852 MAGEH1Q9H213 219 aa17.64■□□□□ 0.41
SMC6-206ENST00000446852 FBXO6Q9NRD1 293 aaPredicted RBP17.64■□□□□ 0.41
SMC6-206ENST00000446852 MARCOQ9UEW3 520 aaPredicted RBP17.64■□□□□ 0.41
SMC6-206ENST00000446852 ZFP69BQ9UJL9 534 aa17.64■□□□□ 0.41
SMC6-206ENST00000446852 AGO1Q9UL18 857 aaKnown RBP17.64■□□□□ 0.41
SMC6-206ENST00000446852 LOC285095A0A1B0GVY8 99 aa17.63■□□□□ 0.41
SMC6-206ENST00000446852 ITM2AO43736 263 aa17.63■□□□□ 0.41
SMC6-206ENST00000446852 LYPLA1O75608 230 aaPredicted RBP17.63■□□□□ 0.41
SMC6-206ENST00000446852 TIMP1P01033 207 aa17.63■□□□□ 0.41
SMC6-206ENST00000446852 T-ENOLP0DO92 83 aa17.63■□□□□ 0.41
SMC6-206ENST00000446852 ACRP10323 421 aa17.63■□□□□ 0.41
SMC6-206ENST00000446852 SAT1P21673 171 aa17.63■□□□□ 0.41
SMC6-206ENST00000446852 GLDCP23378 1020 aa17.63■□□□□ 0.41
SMC6-206ENST00000446852 TARSP26639 723 aaKnown RBP17.63■□□□□ 0.41
SMC6-206ENST00000446852 SERPINB3P29508 390 aa17.63■□□□□ 0.41
SMC6-206ENST00000446852 CCDC153Q494R4 210 aa17.63■□□□□ 0.41
SMC6-206ENST00000446852 ZNF470Q6ECI4 717 aa17.63■□□□□ 0.41
SMC6-206ENST00000446852 ATG14Q6ZNE5 492 aa17.63■□□□□ 0.41
SMC6-206ENST00000446852 DNAJB7Q7Z6W7 309 aaPredicted RBP17.63■□□□□ 0.41
SMC6-206ENST00000446852 CMTR2Q8IYT2 770 aaKnown RBP17.63■□□□□ 0.41
SMC6-206ENST00000446852 OR13J1Q8NGT2 312 aa17.63■□□□□ 0.41
SMC6-206ENST00000446852 PPP1R14CQ8TAE6 165 aa17.63■□□□□ 0.41
SMC6-206ENST00000446852 SKA1Q96BD8 255 aa17.63■□□□□ 0.41
SMC6-206ENST00000446852 KLHL29Q96CT2 875 aa17.63■□□□□ 0.41
SMC6-206ENST00000446852 PHGDHO43175 533 aaKnown RBP17.63■□□□□ 0.41
SMC6-206ENST00000446852 PAMP19021 973 aa17.63■□□□□ 0.41
SMC6-206ENST00000446852 VEPH1Q14D04 833 aa17.63■□□□□ 0.41
SMC6-206ENST00000446852 UGP2Q16851 508 aa17.63■□□□□ 0.41
SMC6-206ENST00000446852 CTC1Q2NKJ3 1217 aa17.63■□□□□ 0.41
SMC6-206ENST00000446852 TSTD2Q5T7W7 516 aa17.63■□□□□ 0.41
SMC6-206ENST00000446852 PRR11Q96HE9 360 aaPredicted RBP17.63■□□□□ 0.41
SMC6-206ENST00000446852 THAP1Q9NVV9 213 aa17.63■□□□□ 0.41
SMC6-206ENST00000446852 INSL5Q9Y5Q6 135 aa17.63■□□□□ 0.41
SMC6-206ENST00000446852 CFAP73A6NFT4 308 aa17.62■□□□□ 0.41
SMC6-206ENST00000446852 AURKAO14965 403 aa17.62■□□□□ 0.41
SMC6-206ENST00000446852 TSPAN3O60637 253 aa17.62■□□□□ 0.41
SMC6-206ENST00000446852 KITP10721 976 aa17.62■□□□□ 0.41
SMC6-206ENST00000446852 ARRB2P32121 409 aa17.62■□□□□ 0.41
SMC6-206ENST00000446852 HADHAP40939 763 aa17.62■□□□□ 0.41
SMC6-206ENST00000446852 THOC5Q13769 683 aaKnown RBP17.62■□□□□ 0.41
SMC6-206ENST00000446852 USP10Q14694 798 aaKnown RBP17.62■□□□□ 0.41
SMC6-206ENST00000446852 IL31Q6EBC2 164 aa17.62■□□□□ 0.41
SMC6-206ENST00000446852 CYB5D1Q6P9G0 228 aa17.62■□□□□ 0.41
SMC6-206ENST00000446852 CRLF3Q8IUI8 442 aa17.62■□□□□ 0.41
SMC6-206ENST00000446852 SLC41A1Q8IVJ1 513 aa17.62■□□□□ 0.41
SMC6-206ENST00000446852 TCEAL8Q8IYN2 117 aa17.62■□□□□ 0.41
SMC6-206ENST00000446852 C2CD4AQ8NCU7 369 aaPredicted RBP17.62■□□□□ 0.41
SMC6-206ENST00000446852 ZFRQ96KR1 1074 aaKnown RBP17.62■□□□□ 0.41
SMC6-206ENST00000446852 ZNF599Q96NL3 588 aa17.62■□□□□ 0.41
SMC6-206ENST00000446852 SLC22A12Q96S37 553 aa17.62■□□□□ 0.41
SMC6-206ENST00000446852 C1QTNF1Q9BXJ1 281 aa17.62■□□□□ 0.41
SMC6-206ENST00000446852 ZNF334Q9HCZ1 680 aaPredicted RBP17.62■□□□□ 0.41
SMC6-206ENST00000446852 TXLNGQ9NUQ3 528 aa17.62■□□□□ 0.41
SMC6-206ENST00000446852 SMPD4Q9NXE4 827 aa17.62■□□□□ 0.41
SMC6-206ENST00000446852 CLDN11O75508 207 aa17.62■□□□□ 0.41
SMC6-206ENST00000446852 SLC35E2BP0CK96 405 aa17.62■□□□□ 0.41
SMC6-206ENST00000446852 CPA3P15088 417 aa17.62■□□□□ 0.41
SMC6-206ENST00000446852 AVPR1AP37288 418 aa17.62■□□□□ 0.41
SMC6-206ENST00000446852 ADGRF1Q5T601 910 aa17.62■□□□□ 0.41
SMC6-206ENST00000446852 ALG1LQ6GMV1 187 aa17.62■□□□□ 0.41
SMC6-206ENST00000446852 NEPROQ6NW34 567 aa17.62■□□□□ 0.41
SMC6-206ENST00000446852 RAPH1Q70E73 1250 aa17.62■□□□□ 0.41
SMC6-206ENST00000446852 TMEM237Q96Q45 408 aa17.62■□□□□ 0.41
SMC6-206ENST00000446852 CYP2S1Q96SQ9 504 aa17.62■□□□□ 0.41
SMC6-206ENST00000446852 SPON2Q9BUD6 331 aa17.62■□□□□ 0.41
SMC6-206ENST00000446852 C11orf49Q9H6J7 331 aa17.62■□□□□ 0.41
SMC6-206ENST00000446852 ARHGEF3Q9NR81 526 aa17.62■□□□□ 0.41
SMC6-206ENST00000446852 WBP1LQ9NX94 342 aa17.62■□□□□ 0.41
SMC6-206ENST00000446852 KCNK4Q9NYG8 393 aa17.62■□□□□ 0.41
SMC6-206ENST00000446852 HAO1Q9UJM8 370 aa17.62■□□□□ 0.41
SMC6-206ENST00000446852 LAMA3Q16787 3333 aa17.61■□□□□ 0.41
SMC6-206ENST00000446852 MROH6A6NGR9 719 aa17.61■□□□□ 0.41
SMC6-206ENST00000446852 G3V2L1 256 aa17.61■□□□□ 0.41
SMC6-206ENST00000446852 SCAMP3O14828 347 aaKnown RBP17.61■□□□□ 0.41
SMC6-206ENST00000446852 TEX28O15482 410 aa17.61■□□□□ 0.41
SMC6-206ENST00000446852 CBX6O95503 412 aa17.61■□□□□ 0.41
SMC6-206ENST00000446852 SERPINE1P05121 402 aa17.61■□□□□ 0.41
SMC6-206ENST00000446852 SPATA31D3P0C874 917 aa17.61■□□□□ 0.41
SMC6-206ENST00000446852 NQO1P15559 274 aaKnown RBP17.61■□□□□ 0.41
SMC6-206ENST00000446852 GJA8P48165 433 aa17.61■□□□□ 0.41
SMC6-206ENST00000446852 SLC1A6P48664 564 aa17.61■□□□□ 0.41
SMC6-206ENST00000446852 ELF3P78545 371 aaPredicted RBP17.61■□□□□ 0.41
SMC6-206ENST00000446852 ZNF460Q14592 562 aa17.61■□□□□ 0.41
SMC6-206ENST00000446852 SPDYAQ5MJ70 313 aa17.61■□□□□ 0.41
SMC6-206ENST00000446852 SPATA31D4Q6ZUB0 917 aa17.61■□□□□ 0.41
SMC6-206ENST00000446852 CEP97Q8IW35 865 aa17.61■□□□□ 0.41
SMC6-206ENST00000446852 PNPLA1Q8N8W4 532 aa17.61■□□□□ 0.41
SMC6-206ENST00000446852 NSMCE3Q96MG7 304 aa17.61■□□□□ 0.41
SMC6-206ENST00000446852 FAM167BQ9BTA0 163 aa17.61■□□□□ 0.41
SMC6-206ENST00000446852 RETREG1Q9H6L5 497 aa17.61■□□□□ 0.41
SMC6-206ENST00000446852 FBXO5Q9UKT4 447 aa17.61■□□□□ 0.41
SMC6-206ENST00000446852 FAM95CA0A1B0GW59 222 aa17.61■□□□□ 0.41
SMC6-206ENST00000446852 CCL22O00626 93 aa17.61■□□□□ 0.41
SMC6-206ENST00000446852 HAUS5O94927 633 aa17.61■□□□□ 0.41
SMC6-206ENST00000446852 ELF1P32519 619 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms