RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 SLC1A2P43004 574 aa9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 OXCT1P55809 520 aa9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 NCALDP61601 193 aa9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 GALNT3Q14435 633 aa9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 STXBP5Q5T5C0 1151 aa9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 ADGRF1Q5T601 910 aa9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 TXNDC8Q6A555 127 aa9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 KLHDC10Q6PID8 442 aa9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 PTAR1Q7Z6K3 402 aaPredicted RBP9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 CRLF3Q8IUI8 442 aa9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 TMEM199Q8N511 208 aa9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 ARL14EPQ8N8R7 260 aaPredicted RBP9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 PNPLA1Q8N8W4 532 aa9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 OR6P1Q8NGX9 317 aa9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 PTCD2Q8WV60 388 aaKnown RBP9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 FATE1Q969F0 183 aa9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 KLHL29Q96CT2 875 aa9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 EXOC2Q96KP1 924 aa9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 SLC22A12Q96S37 553 aa9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 KLF16Q9BXK1 252 aaPredicted RBP9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 MUC3BQ9H195 1237 aa9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 MAGEH1Q9H213 219 aa9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 KCNK13Q9HB14 408 aa9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 ATP13A1Q9HD20 1204 aa9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 CPSF2Q9P2I0 782 aaKnown RBP9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 HSFX1Q9UBD0 423 aa9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 INSL5Q9Y5Q6 135 aa9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 BUD23O43709 281 aaKnown RBP9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 ITM2AO43736 263 aa9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 DNAJC6O75061 913 aa9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 CLDN11O75508 207 aa9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 HAUS5O94927 633 aa9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 TGDSO95455 350 aa9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 GSRP00390 522 aa9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 PRKCGP05129 697 aa9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 PIRTP0C851 137 aa9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 CPA3P15088 417 aa9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 GLRBP48167 497 aa9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 SCNN1BP51168 640 aa9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 SMAD3P84022 425 aaKnown RBP9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 CCDC15Q0P6D6 951 aa9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 ZNF460Q14592 562 aa9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 PCLAFQ15004 111 aa9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 UGP2Q16851 508 aa9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 INSCQ1MX18 579 aa9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 RNF219Q5W0B1 726 aaPredicted RBP9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 NEPROQ6NW34 567 aa9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 EP400NLQ6ZTU2 488 aa9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 CCDC117Q8IWD4 279 aaPredicted RBP9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 CMTR2Q8IYT2 770 aaKnown RBP9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 BBS5Q8N3I7 341 aa9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 SPATA6LQ8N4H0 392 aa9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 BLOC1S5Q8TDH9 187 aa9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 ELMO2Q96JJ3 720 aa9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 TSNARE1Q96NA8 513 aa9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 ZBED2Q9BTP6 218 aa9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 CINPQ9BW66 212 aaPredicted RBP9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 PRKD2Q9BZL6 878 aa9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 RHOJQ9H4E5 214 aa9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 TASP1Q9H6P5 420 aa9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 ARNT2Q9HBZ2 717 aa9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 ZNF334Q9HCZ1 680 aaPredicted RBP9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 FBXO6Q9NRD1 293 aaPredicted RBP9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 TREX1Q9NSU2 369 aa9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 COPG2Q9UBF2 871 aa9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 UBA2Q9UBT2 640 aaPredicted RBP9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 HAO1Q9UJM8 370 aa9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 KCTD3Q9Y597 815 aa9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 PCDHB12Q9Y5F1 795 aa9.62□□□□□ -0.87
COL6A4P1-201ENST00000446690 LAMA2P24043 3122 aaKnown RBP9.61□□□□□ -0.87
COL6A4P1-201ENST00000446690 H0Y626 953 aa9.61□□□□□ -0.87
COL6A4P1-201ENST00000446690 H3BNC9 293 aa9.61□□□□□ -0.87
COL6A4P1-201ENST00000446690 FGF18O76093 207 aa9.61□□□□□ -0.87
COL6A4P1-201ENST00000446690 FGF3P11487 239 aaPredicted RBP9.61□□□□□ -0.87
COL6A4P1-201ENST00000446690 HDCP19113 662 aa9.61□□□□□ -0.87
COL6A4P1-201ENST00000446690 SERPINB3P29508 390 aa9.61□□□□□ -0.87
COL6A4P1-201ENST00000446690 SLC1A6P48664 564 aa9.61□□□□□ -0.87
COL6A4P1-201ENST00000446690 KCNJ2P63252 427 aa9.61□□□□□ -0.87
COL6A4P1-201ENST00000446690 CDK18Q07002 472 aa9.61□□□□□ -0.87
COL6A4P1-201ENST00000446690 ITGA9Q13797 1035 aa9.61□□□□□ -0.87
COL6A4P1-201ENST00000446690 PTPRCAPQ14761 206 aa9.61□□□□□ -0.87
COL6A4P1-201ENST00000446690 CCDC153Q494R4 210 aa9.61□□□□□ -0.87
COL6A4P1-201ENST00000446690 C5orf22Q49AR2 442 aa9.61□□□□□ -0.87
COL6A4P1-201ENST00000446690 TSTD2Q5T7W7 516 aa9.61□□□□□ -0.87
COL6A4P1-201ENST00000446690 MBLAC2Q68D91 279 aa9.61□□□□□ -0.87
COL6A4P1-201ENST00000446690 TMEM150AQ86TG1 271 aa9.61□□□□□ -0.87
COL6A4P1-201ENST00000446690 LDB1Q86U70 411 aaPredicted RBP9.61□□□□□ -0.87
COL6A4P1-201ENST00000446690 CARNMT1Q8N4J0 409 aa9.61□□□□□ -0.87
COL6A4P1-201ENST00000446690 ZNF398Q8TD17 642 aa9.61□□□□□ -0.87
COL6A4P1-201ENST00000446690 TRMT2BQ96GJ1 504 aaKnown RBP9.61□□□□□ -0.87
COL6A4P1-201ENST00000446690 SCYL1Q96KG9 808 aa9.61□□□□□ -0.87
COL6A4P1-201ENST00000446690 C7orf26Q96N11 449 aa9.61□□□□□ -0.87
COL6A4P1-201ENST00000446690 GPR22Q99680 433 aa9.61□□□□□ -0.87
COL6A4P1-201ENST00000446690 UNKQ9C0B0 810 aaKnown RBP9.61□□□□□ -0.87
COL6A4P1-201ENST00000446690 RC3H2Q9HBD1 1191 aaKnown RBP9.61□□□□□ -0.87
COL6A4P1-201ENST00000446690 PDFQ9HBH1 243 aa9.61□□□□□ -0.87
COL6A4P1-201ENST00000446690 NMRAL1Q9HBL8 299 aa9.61□□□□□ -0.87
COL6A4P1-201ENST00000446690 MRM3Q9HC36 420 aaKnown RBP9.61□□□□□ -0.87
COL6A4P1-201ENST00000446690 THAP1Q9NVV9 213 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms