RNA–Protein interactions for RNA: ENST00000446046.5

FN1-212, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-212ENST00000446046 ITGAVP06756 1048 aa11.82□□□□□ -0.52
FN1-212ENST00000446046 HNRNPH1P31943 449 aaKnown RBP11.82□□□□□ -0.52
FN1-212ENST00000446046 SMAD3P84022 425 aaKnown RBP11.82□□□□□ -0.52
FN1-212ENST00000446046 FPGSQ05932 587 aa11.82□□□□□ -0.52
FN1-212ENST00000446046 LRRC36Q1X8D7 754 aa11.82□□□□□ -0.52
FN1-212ENST00000446046 TRIM40Q6P9F5 258 aa11.82□□□□□ -0.52
FN1-212ENST00000446046 LRRC74BQ6ZQY2 392 aa11.82□□□□□ -0.52
FN1-212ENST00000446046 C1orf186Q6ZWK4 172 aa11.82□□□□□ -0.52
FN1-212ENST00000446046 GPR141Q7Z602 305 aa11.82□□□□□ -0.52
FN1-212ENST00000446046 FAM228AQ86W67 206 aa11.82□□□□□ -0.52
FN1-212ENST00000446046 GJD3Q8N144 294 aa11.82□□□□□ -0.52
FN1-212ENST00000446046 TRPM4Q8TD43 1214 aa11.82□□□□□ -0.52
FN1-212ENST00000446046 COL26A1Q96A83 441 aa11.82□□□□□ -0.52
FN1-212ENST00000446046 VPS4AQ9UN37 437 aa11.82□□□□□ -0.52
FN1-212ENST00000446046 SLC45A1Q9Y2W3 748 aa11.82□□□□□ -0.52
FN1-212ENST00000446046 PER2O15055 1255 aa11.82□□□□□ -0.52
FN1-212ENST00000446046 NT5DC1Q5TFE4 455 aa11.82□□□□□ -0.52
FN1-212ENST00000446046 TYW3Q6IPR3 259 aaKnown RBP11.82□□□□□ -0.52
FN1-212ENST00000446046 ASZ1Q8WWH4 475 aa11.82□□□□□ -0.52
FN1-212ENST00000446046 CDC42EP4Q9H3Q1 356 aaKnown RBP11.82□□□□□ -0.52
FN1-212ENST00000446046 DDX4Q9NQI0 724 aaKnown RBP11.82□□□□□ -0.52
FN1-212ENST00000446046 VAV3Q9UKW4 847 aa11.82□□□□□ -0.52
FN1-212ENST00000446046 PNMA8CA0A1B0GUJ8 204 aa11.82□□□□□ -0.52
FN1-212ENST00000446046 WDR27A2RRH5 827 aa11.82□□□□□ -0.52
FN1-212ENST00000446046 RFC2P35250 354 aa11.82□□□□□ -0.52
FN1-212ENST00000446046 ITGADQ13349 1161 aa11.82□□□□□ -0.52
FN1-212ENST00000446046 LRRC38Q5VT99 294 aa11.82□□□□□ -0.52
FN1-212ENST00000446046 FAAH2Q6GMR7 532 aa11.82□□□□□ -0.52
FN1-212ENST00000446046 C12orf50Q8NA57 414 aaPredicted RBP11.82□□□□□ -0.52
FN1-212ENST00000446046 ATG4AQ8WYN0 398 aa11.82□□□□□ -0.52
FN1-212ENST00000446046 PPP3R2Q96LZ3 170 aa11.82□□□□□ -0.52
FN1-212ENST00000446046 ZIM3Q96PE6 472 aa11.82□□□□□ -0.52
FN1-212ENST00000446046 PCBD2Q9H0N5 130 aa11.82□□□□□ -0.52
FN1-212ENST00000446046 FANCFQ9NPI8 374 aa11.82□□□□□ -0.52
FN1-212ENST00000446046 ANGPT4Q9Y264 503 aa11.82□□□□□ -0.52
FN1-212ENST00000446046 PSMC6P62333 389 aa11.81□□□□□ -0.52
FN1-212ENST00000446046 E2F4Q16254 413 aa11.81□□□□□ -0.52
FN1-212ENST00000446046 INAQ16352 499 aa11.81□□□□□ -0.52
FN1-212ENST00000446046 TMEM164Q5U3C3 297 aa11.81□□□□□ -0.52
FN1-212ENST00000446046 RAP1GAP2Q684P5 730 aa11.81□□□□□ -0.52
FN1-212ENST00000446046 NEPROQ6NW34 567 aa11.81□□□□□ -0.52
FN1-212ENST00000446046 MAB21L3Q8N8X9 362 aa11.81□□□□□ -0.52
FN1-212ENST00000446046 ACMSDQ8TDX5 336 aa11.81□□□□□ -0.52
FN1-212ENST00000446046 UPF1Q92900 1129 aaKnown RBP eCLIP11.81□□□□□ -0.524e-14■□□□□ 8.6
FN1-212ENST00000446046 PCM1Q15154 2024 aa11.81□□□□□ -0.52
FN1-212ENST00000446046 A0A096LPK6 155 aa11.81□□□□□ -0.52
FN1-212ENST00000446046 KDELR1P24390 212 aa11.81□□□□□ -0.52
FN1-212ENST00000446046 CCZ1BP86790 482 aa11.81□□□□□ -0.52
FN1-212ENST00000446046 CCZ1P86791 482 aaPredicted RBP11.81□□□□□ -0.52
FN1-212ENST00000446046 IRF8Q02556 426 aa11.81□□□□□ -0.52
FN1-212ENST00000446046 DUSP4Q13115 394 aa11.81□□□□□ -0.52
FN1-212ENST00000446046 WDR93Q6P2C0 686 aa11.81□□□□□ -0.52
FN1-212ENST00000446046 FAM43BQ6ZT52 329 aaPredicted RBP11.81□□□□□ -0.52
FN1-212ENST00000446046 CACUL1Q86Y37 369 aa11.81□□□□□ -0.52
FN1-212ENST00000446046 KLRG1Q96E93 195 aa11.81□□□□□ -0.52
FN1-212ENST00000446046 KCNMB3Q9NPA1 279 aa11.81□□□□□ -0.52
FN1-212ENST00000446046 EXD2Q9NVH0 621 aa11.81□□□□□ -0.52
FN1-212ENST00000446046 PPIBP23284 216 aaKnown RBP11.81□□□□□ -0.52
FN1-212ENST00000446046 HSPA14Q0VDF9 509 aa11.81□□□□□ -0.52
FN1-212ENST00000446046 SLC25A52Q3SY17 297 aa11.81□□□□□ -0.52
FN1-212ENST00000446046 TIMM50Q3ZCQ8 353 aa11.81□□□□□ -0.52
FN1-212ENST00000446046 ZNF571Q7Z3V5 609 aaPredicted RBP11.81□□□□□ -0.52
FN1-212ENST00000446046 NPAS4Q8IUM7 802 aa11.81□□□□□ -0.52
FN1-212ENST00000446046 NRDE2Q9H7Z3 1164 aa11.81□□□□□ -0.52
FN1-212ENST00000446046 REEP1Q9H902 201 aa11.81□□□□□ -0.52
FN1-212ENST00000446046 CYLDQ9NQC7 956 aa11.81□□□□□ -0.52
FN1-212ENST00000446046 DUS2Q9NX74 493 aaKnown RBP11.81□□□□□ -0.52
FN1-212ENST00000446046 COPS7AQ9UBW8 275 aa11.81□□□□□ -0.52
FN1-212ENST00000446046 TAGLN3Q9UI15 199 aa11.81□□□□□ -0.52
FN1-212ENST00000446046 TPRKBQ9Y3C4 175 aa11.81□□□□□ -0.52
FN1-212ENST00000446046 PDX1P52945 283 aa11.81□□□□□ -0.52
FN1-212ENST00000446046 MTM1Q13496 603 aa11.81□□□□□ -0.52
FN1-212ENST00000446046 FGD3Q5JSP0 725 aa11.81□□□□□ -0.52
FN1-212ENST00000446046 MRPL57Q9BQC6 102 aaKnown RBP11.81□□□□□ -0.52
FN1-212ENST00000446046 KLHL4Q9C0H6 718 aa11.81□□□□□ -0.52
FN1-212ENST00000446046 FAM198AQ9UFP1 575 aa11.81□□□□□ -0.52
FN1-212ENST00000446046 PCDHB1Q9Y5F3 818 aa11.81□□□□□ -0.52
FN1-212ENST00000446046 UBIAD1Q9Y5Z9 338 aa11.81□□□□□ -0.52
FN1-212ENST00000446046 STON1Q9Y6Q2 735 aa11.81□□□□□ -0.52
FN1-212ENST00000446046 TRIM24O15164 1050 aa11.81□□□□□ -0.52
FN1-212ENST00000446046 ATG7O95352 703 aa11.81□□□□□ -0.52
FN1-212ENST00000446046 KCNA3P22001 575 aa11.81□□□□□ -0.52
FN1-212ENST00000446046 GLRA2P23416 452 aa11.81□□□□□ -0.52
FN1-212ENST00000446046 PLIN5Q00G26 463 aa11.81□□□□□ -0.52
FN1-212ENST00000446046 PLD4Q96BZ4 506 aa11.81□□□□□ -0.52
FN1-212ENST00000446046 SLC9A8Q9Y2E8 581 aa11.81□□□□□ -0.52
FN1-212ENST00000446046 GSTK1Q9Y2Q3 226 aa11.81□□□□□ -0.52
FN1-212ENST00000446046 BCL9LQ86UU0 1499 aa11.81□□□□□ -0.52
FN1-212ENST00000446046 PTPRJQ12913 1337 aa11.81□□□□□ -0.52
FN1-212ENST00000446046 LOC100653049A0A140TA62 436 aa11.81□□□□□ -0.52
FN1-212ENST00000446046 SERPINB7O75635 380 aa11.81□□□□□ -0.52
FN1-212ENST00000446046 NTRK3Q16288 839 aa11.81□□□□□ -0.52
FN1-212ENST00000446046 CYP2W1Q8TAV3 490 aa11.81□□□□□ -0.52
FN1-212ENST00000446046 PTCD2Q8WV60 388 aaKnown RBP11.81□□□□□ -0.52
FN1-212ENST00000446046 CLP1Q92989 425 aaKnown RBP11.81□□□□□ -0.52
FN1-212ENST00000446046 APOPT1Q96IL0 206 aa11.81□□□□□ -0.52
FN1-212ENST00000446046 FAXDC2Q96IV6 333 aa11.81□□□□□ -0.52
FN1-212ENST00000446046 HCN3Q9P1Z3 774 aa11.81□□□□□ -0.52
FN1-212ENST00000446046 CLDN4O14493 209 aa11.81□□□□□ -0.52
FN1-212ENST00000446046 DNALI1O14645 258 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms