RNA–Protein interactions for RNA: ENST00000445503.5

MSH6-204, Transcript of mutS homolog 6, humanhuman

TSL 1 (best)

Gene MSH6, Length 4,158 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-204ENST00000445503 CXCR3P49682 368 aa11.99□□□□□ -0.49
MSH6-204ENST00000445503 OTUD3Q5T2D3 398 aaPredicted RBP11.99□□□□□ -0.49
MSH6-204ENST00000445503 PKN3Q6P5Z2 889 aa11.99□□□□□ -0.49
MSH6-204ENST00000445503 FAM35AQ86V20 835 aa11.99□□□□□ -0.49
MSH6-204ENST00000445503 FAM47BQ8NA70 645 aa11.99□□□□□ -0.49
MSH6-204ENST00000445503 ADCY4Q8NFM4 1077 aa11.99□□□□□ -0.49
MSH6-204ENST00000445503 FAM81AQ8TBF8 368 aa11.99□□□□□ -0.49
MSH6-204ENST00000445503 ZFAND2BQ8WV99 257 aa11.99□□□□□ -0.49
MSH6-204ENST00000445503 TSPAN17Q96FV3 270 aa11.99□□□□□ -0.49
MSH6-204ENST00000445503 CCDC138Q96M89 665 aa11.99□□□□□ -0.49
MSH6-204ENST00000445503 GREB1LQ9C091 1923 aaPredicted RBP11.99□□□□□ -0.49
MSH6-204ENST00000445503 CATSPERBQ9H7T0 1116 aa11.99□□□□□ -0.49
MSH6-204ENST00000445503 ABI2Q9NYB9 513 aaPredicted RBP11.99□□□□□ -0.49
MSH6-204ENST00000445503 BTRCQ9Y297 605 aa11.99□□□□□ -0.49
MSH6-204ENST00000445503 E7ENX8 843 aa11.99□□□□□ -0.49
MSH6-204ENST00000445503 ARSAP15289 507 aa11.99□□□□□ -0.49
MSH6-204ENST00000445503 CD1EP15812 388 aa11.99□□□□□ -0.49
MSH6-204ENST00000445503 CYP2B6P20813 491 aa11.99□□□□□ -0.49
MSH6-204ENST00000445503 PHEXP78562 749 aa11.99□□□□□ -0.49
MSH6-204ENST00000445503 TSPY1Q01534 308 aa11.99□□□□□ -0.49
MSH6-204ENST00000445503 C16orf72Q14CZ0 275 aa11.99□□□□□ -0.49
MSH6-204ENST00000445503 STEAP4Q687X5 459 aa11.99□□□□□ -0.49
MSH6-204ENST00000445503 CNSTQ6PJW8 725 aa11.99□□□□□ -0.49
MSH6-204ENST00000445503 ARHGAP36Q6ZRI8 547 aa11.99□□□□□ -0.49
MSH6-204ENST00000445503 ZC3HC1Q86WB0 502 aaKnown RBP11.99□□□□□ -0.49
MSH6-204ENST00000445503 PPTC7Q8NI37 304 aa11.99□□□□□ -0.49
MSH6-204ENST00000445503 SLC16A10Q8TF71 515 aa11.99□□□□□ -0.49
MSH6-204ENST00000445503 DLG3Q92796 817 aa11.99□□□□□ -0.49
MSH6-204ENST00000445503 RMDN1Q96DB5 314 aa11.99□□□□□ -0.49
MSH6-204ENST00000445503 UTP6Q9NYH9 597 aaKnown RBP11.99□□□□□ -0.49
MSH6-204ENST00000445503 CCL15-CCL14A0A0B4J2E2 113 aa11.99□□□□□ -0.49
MSH6-204ENST00000445503 TADA2AO75478 443 aa11.99□□□□□ -0.49
MSH6-204ENST00000445503 JUNP05412 331 aaKnown RBP11.99□□□□□ -0.49
MSH6-204ENST00000445503 THP07101 528 aa11.99□□□□□ -0.49
MSH6-204ENST00000445503 CDK18Q07002 472 aa11.99□□□□□ -0.49
MSH6-204ENST00000445503 CAPRIN1Q14444 709 aaKnown RBP11.99□□□□□ -0.49
MSH6-204ENST00000445503 CCL15Q16663 113 aa11.99□□□□□ -0.49
MSH6-204ENST00000445503 STXBP5Q5T5C0 1151 aa11.99□□□□□ -0.49
MSH6-204ENST00000445503 FBXL19Q6PCT2 694 aa11.99□□□□□ -0.49
MSH6-204ENST00000445503 KLHDC10Q6PID8 442 aa11.99□□□□□ -0.49
MSH6-204ENST00000445503 CLEC20AQ6ZU45 233 aa11.99□□□□□ -0.49
MSH6-204ENST00000445503 PIWIL4Q7Z3Z4 852 aaKnown RBP11.99□□□□□ -0.49
MSH6-204ENST00000445503 GPR141Q7Z602 305 aa11.99□□□□□ -0.49
MSH6-204ENST00000445503 CUZD1Q86UP6 607 aa11.99□□□□□ -0.49
MSH6-204ENST00000445503 SPATA2LQ8IUW3 424 aaPredicted RBP11.99□□□□□ -0.49
MSH6-204ENST00000445503 MRPS26Q9BYN8 205 aaKnown RBP11.99□□□□□ -0.49
MSH6-204ENST00000445503 ADNPQ9H2P0 1102 aa11.99□□□□□ -0.49
MSH6-204ENST00000445503 PPP2R3BQ9Y5P8 575 aa11.99□□□□□ -0.49
MSH6-204ENST00000445503 TAF1LQ8IZX4 1826 aa11.98□□□□□ -0.49
MSH6-204ENST00000445503 TTC24A2A3L6 582 aaPredicted RBP11.98□□□□□ -0.49
MSH6-204ENST00000445503 GOLGA8CPA6NN73 597 aa11.98□□□□□ -0.49
MSH6-204ENST00000445503 G3V2L1 256 aa11.98□□□□□ -0.49
MSH6-204ENST00000445503 ALDH1A2O94788 518 aa11.98□□□□□ -0.49
MSH6-204ENST00000445503 DARSP14868 501 aaKnown RBP11.98□□□□□ -0.49
MSH6-204ENST00000445503 NR1H2P55055 460 aa11.98□□□□□ -0.49
MSH6-204ENST00000445503 ADARP55265 1226 aaKnown RBP11.98□□□□□ -0.49
MSH6-204ENST00000445503 RBBP7Q16576 425 aa11.98□□□□□ -0.49
MSH6-204ENST00000445503 FAM187BQ17R55 369 aa11.98□□□□□ -0.49
MSH6-204ENST00000445503 SH3D19Q5HYK7 790 aa11.98□□□□□ -0.49
MSH6-204ENST00000445503 NPWQ8N729 165 aa11.98□□□□□ -0.49
MSH6-204ENST00000445503 CCDC90BQ9GZT6 254 aa11.98□□□□□ -0.49
MSH6-204ENST00000445503 VTA1Q9NP79 307 aa11.98□□□□□ -0.49
MSH6-204ENST00000445503 ATXN10Q9UBB4 475 aa11.98□□□□□ -0.49
MSH6-204ENST00000445503 IPPQ9Y573 584 aa11.98□□□□□ -0.49
MSH6-204ENST00000445503 TLL2Q9Y6L7 1015 aa11.98□□□□□ -0.49
MSH6-204ENST00000445503 EVPLQ92817 2033 aa11.98□□□□□ -0.49
MSH6-204ENST00000445503 C9IYK1 514 aa11.98□□□□□ -0.49
MSH6-204ENST00000445503 PRDX6P30041 224 aa11.98□□□□□ -0.49
MSH6-204ENST00000445503 MAGEA6P43360 314 aa11.98□□□□□ -0.49
MSH6-204ENST00000445503 GJA9P57773 515 aa11.98□□□□□ -0.49
MSH6-204ENST00000445503 SOX4Q06945 474 aaPredicted RBP11.98□□□□□ -0.49
MSH6-204ENST00000445503 PFKFB4Q16877 469 aa11.98□□□□□ -0.49
MSH6-204ENST00000445503 SDHAF4Q5VUM1 108 aa11.98□□□□□ -0.49
MSH6-204ENST00000445503 C16orf87Q6PH81 154 aa11.98□□□□□ -0.49
MSH6-204ENST00000445503 CRYBG2Q8N1P7 616 aa11.98□□□□□ -0.49
MSH6-204ENST00000445503 DNAJB14Q8TBM8 379 aa11.98□□□□□ -0.49
MSH6-204ENST00000445503 CALML6Q8TD86 181 aa11.98□□□□□ -0.49
MSH6-204ENST00000445503 PCED1BQ96HM7 432 aa11.98□□□□□ -0.49
MSH6-204ENST00000445503 TEKT5Q96M29 485 aa11.98□□□□□ -0.49
MSH6-204ENST00000445503 CAMKK2Q96RR4 588 aa11.98□□□□□ -0.49
MSH6-204ENST00000445503 VAT1Q99536 393 aa11.98□□□□□ -0.49
MSH6-204ENST00000445503 MRPL57Q9BQC6 102 aaKnown RBP11.98□□□□□ -0.49
MSH6-204ENST00000445503 SPAG4Q9NPE6 437 aa11.98□□□□□ -0.49
MSH6-204ENST00000445503 FOCADQ5VW36 1801 aa11.98□□□□□ -0.49
MSH6-204ENST00000445503 DOCK5Q9H7D0 1870 aa11.98□□□□□ -0.49
MSH6-204ENST00000445503 PDHXO00330 501 aa11.98□□□□□ -0.49
MSH6-204ENST00000445503 TREHO43280 583 aa11.98□□□□□ -0.49
MSH6-204ENST00000445503 CHEK2O96017 543 aa11.98□□□□□ -0.49
MSH6-204ENST00000445503 RBP1P09455 135 aa11.98□□□□□ -0.49
MSH6-204ENST00000445503 SLC1A2P43004 574 aa11.98□□□□□ -0.49
MSH6-204ENST00000445503 SCNN1GP51170 649 aa11.98□□□□□ -0.49
MSH6-204ENST00000445503 NEDD8Q15843 81 aa11.98□□□□□ -0.49
MSH6-204ENST00000445503 PPP1R3AQ16821 1122 aa11.98□□□□□ -0.49
MSH6-204ENST00000445503 KBTBD6Q86V97 674 aa11.98□□□□□ -0.49
MSH6-204ENST00000445503 THEM5Q8N1Q8 247 aa11.98□□□□□ -0.49
MSH6-204ENST00000445503 HNRNPABQ99729 332 aaKnown RBP11.98□□□□□ -0.49
MSH6-204ENST00000445503 MLPHQ9BV36 600 aaPredicted RBP11.98□□□□□ -0.49
MSH6-204ENST00000445503 GIMAP2Q9UG22 337 aa11.98□□□□□ -0.49
MSH6-204ENST00000445503 GSTA4O15217 222 aa11.97□□□□□ -0.49
MSH6-204ENST00000445503 ZNF23P17027 643 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms