RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 MUSKO15146 869 aa17.46■□□□□ 0.39
LIME1-202ENST00000444951 ATP9BO43861 1147 aa17.46■□□□□ 0.39
LIME1-202ENST00000444951 STK10O94804 968 aaKnown RBP17.46■□□□□ 0.39
LIME1-202ENST00000444951 ZNF806P0C7X5 589 aa17.46■□□□□ 0.39
LIME1-202ENST00000444951 PTPN3P26045 913 aa17.46■□□□□ 0.39
LIME1-202ENST00000444951 COILP38432 576 aaPredicted RBP17.46■□□□□ 0.39
LIME1-202ENST00000444951 GDF10P55107 478 aa17.46■□□□□ 0.39
LIME1-202ENST00000444951 IFI35P80217 286 aaPredicted RBP17.46■□□□□ 0.39
LIME1-202ENST00000444951 ZNF33AQ06730 810 aa17.46■□□□□ 0.39
LIME1-202ENST00000444951 WASHC5Q12768 1159 aa17.46■□□□□ 0.39
LIME1-202ENST00000444951 HNRNPDQ14103 355 aaKnown RBP17.46■□□□□ 0.39
LIME1-202ENST00000444951 RFTN1Q14699 578 aaPredicted RBP17.46■□□□□ 0.39
LIME1-202ENST00000444951 E2F5Q15329 346 aa17.46■□□□□ 0.39
LIME1-202ENST00000444951 OASLQ15646 514 aaKnown RBP17.46■□□□□ 0.39
LIME1-202ENST00000444951 INO80DQ53TQ3 878 aaPredicted RBP17.46■□□□□ 0.39
LIME1-202ENST00000444951 CCDC137Q6PK04 289 aaKnown RBP17.46■□□□□ 0.39
LIME1-202ENST00000444951 TRMT11Q7Z4G4 463 aaKnown RBP17.46■□□□□ 0.39
LIME1-202ENST00000444951 PRUNE1Q86TP1 453 aa17.46■□□□□ 0.39
LIME1-202ENST00000444951 TAB3Q8N5C8 712 aaPredicted RBP17.46■□□□□ 0.39
LIME1-202ENST00000444951 OR6K2Q8NGY2 324 aa17.46■□□□□ 0.39
LIME1-202ENST00000444951 CCDC26Q8TAB7 109 aa17.46■□□□□ 0.39
LIME1-202ENST00000444951 CASKIN2Q8WXE0 1202 aa17.46■□□□□ 0.39
LIME1-202ENST00000444951 MAML1Q92585 1016 aa17.46■□□□□ 0.39
LIME1-202ENST00000444951 ZNF419Q96HQ0 510 aaPredicted RBP17.46■□□□□ 0.39
LIME1-202ENST00000444951 TPSD1Q9BZJ3 242 aa17.46■□□□□ 0.39
LIME1-202ENST00000444951 USP29Q9HBJ7 922 aa17.46■□□□□ 0.39
LIME1-202ENST00000444951 KLHL8Q9P2G9 620 aaPredicted RBP17.46■□□□□ 0.39
LIME1-202ENST00000444951 LHX3Q9UBR4 397 aa17.46■□□□□ 0.39
LIME1-202ENST00000444951 MYO18AQ92614 2054 aaKnown RBP17.46■□□□□ 0.39
LIME1-202ENST00000444951 MUC22E2RYF6 1773 aaPredicted RBP17.45■□□□□ 0.38
LIME1-202ENST00000444951 KMT2BQ9UMN6 2715 aaPredicted RBP17.45■□□□□ 0.38
LIME1-202ENST00000444951 EDDM13A0A1B0GTR0 161 aa17.45■□□□□ 0.38
LIME1-202ENST00000444951 MTSS1O43312 755 aa17.45■□□□□ 0.38
LIME1-202ENST00000444951 SYNCRIPO60506 623 aaKnown RBP17.45■□□□□ 0.38
LIME1-202ENST00000444951 GJB3O75712 270 aa17.45■□□□□ 0.38
LIME1-202ENST00000444951 HLA-DQB2P05538 268 aa17.45■□□□□ 0.38
LIME1-202ENST00000444951 ITGAVP06756 1048 aa17.45■□□□□ 0.38
LIME1-202ENST00000444951 ETS1P14921 441 aa17.45■□□□□ 0.38
LIME1-202ENST00000444951 KCNA4P22459 653 aa17.45■□□□□ 0.38
LIME1-202ENST00000444951 MPLP40238 635 aa17.45■□□□□ 0.38
LIME1-202ENST00000444951 RECQLP46063 649 aaPredicted RBP17.45■□□□□ 0.38
LIME1-202ENST00000444951 RGRP47804 291 aa17.45■□□□□ 0.38
LIME1-202ENST00000444951 DGKEP52429 567 aa17.45■□□□□ 0.38
LIME1-202ENST00000444951 TUBB2AQ13885 445 aa17.45■□□□□ 0.38
LIME1-202ENST00000444951 TRIP13Q15645 432 aaPredicted RBP17.45■□□□□ 0.38
LIME1-202ENST00000444951 HNRNPA1L2Q32P51 320 aaKnown RBP17.45■□□□□ 0.38
LIME1-202ENST00000444951 PID1Q7Z2X4 250 aa17.45■□□□□ 0.38
LIME1-202ENST00000444951 ZNF567Q8N184 647 aa17.45■□□□□ 0.38
LIME1-202ENST00000444951 PGBD5Q8N414 524 aa17.45■□□□□ 0.38
LIME1-202ENST00000444951 CCDC89Q8N998 374 aa17.45■□□□□ 0.38
LIME1-202ENST00000444951 C12orf50Q8NA57 414 aaPredicted RBP17.45■□□□□ 0.38
LIME1-202ENST00000444951 SPATA4Q8NEY3 305 aa17.45■□□□□ 0.38
LIME1-202ENST00000444951 CCDC110Q8TBZ0 833 aa17.45■□□□□ 0.38
LIME1-202ENST00000444951 FRS2Q8WU20 508 aa17.45■□□□□ 0.38
LIME1-202ENST00000444951 KRT12Q99456 494 aa17.45■□□□□ 0.38
LIME1-202ENST00000444951 IL12RB2Q99665 862 aa17.45■□□□□ 0.38
LIME1-202ENST00000444951 TUBB2BQ9BVA1 445 aa17.45■□□□□ 0.38
LIME1-202ENST00000444951 CEP44Q9C0F1 390 aa17.45■□□□□ 0.38
LIME1-202ENST00000444951 TMEM245Q9H330 911 aa17.45■□□□□ 0.38
LIME1-202ENST00000444951 EBF1Q9UH73 591 aa17.45■□□□□ 0.38
LIME1-202ENST00000444951 THADAQ6YHU6 1953 aa17.44■□□□□ 0.38
LIME1-202ENST00000444951 CFAP69A5D8W1 941 aa17.44■□□□□ 0.38
LIME1-202ENST00000444951 TM4SF5O14894 197 aa17.44■□□□□ 0.38
LIME1-202ENST00000444951 NPC1O15118 1278 aa17.44■□□□□ 0.38
LIME1-202ENST00000444951 ZBTB24O43167 697 aaPredicted RBP17.44■□□□□ 0.38
LIME1-202ENST00000444951 ADAM23O75077 832 aa17.44■□□□□ 0.38
LIME1-202ENST00000444951 SIN3BO75182 1162 aa17.44■□□□□ 0.38
LIME1-202ENST00000444951 ZNF821O75541 412 aaPredicted RBP17.44■□□□□ 0.38
LIME1-202ENST00000444951 IGSF6O95976 241 aa17.44■□□□□ 0.38
LIME1-202ENST00000444951 HOXB2P14652 356 aa17.44■□□□□ 0.38
LIME1-202ENST00000444951 BCKDHBP21953 392 aa17.44■□□□□ 0.38
LIME1-202ENST00000444951 CHRNA3P32297 505 aa17.44■□□□□ 0.38
LIME1-202ENST00000444951 SCNN1BP51168 640 aa17.44■□□□□ 0.38
LIME1-202ENST00000444951 LIMK1P53667 647 aa17.44■□□□□ 0.38
LIME1-202ENST00000444951 CYP1B1Q16678 543 aa17.44■□□□□ 0.38
LIME1-202ENST00000444951 TEX44Q53QW1 395 aa17.44■□□□□ 0.38
LIME1-202ENST00000444951 CARD16Q5EG05 197 aa17.44■□□□□ 0.38
LIME1-202ENST00000444951 DRICH1Q6PGQ1 229 aaPredicted RBP17.44■□□□□ 0.38
LIME1-202ENST00000444951 TMEM92Q6UXU6 159 aa17.44■□□□□ 0.38
LIME1-202ENST00000444951 METTL3Q86U44 580 aaKnown RBP17.44■□□□□ 0.38
LIME1-202ENST00000444951 CACUL1Q86Y37 369 aa17.44■□□□□ 0.38
LIME1-202ENST00000444951 STK40Q8N2I9 435 aa17.44■□□□□ 0.38
LIME1-202ENST00000444951 TEX26Q8N6G2 289 aa17.44■□□□□ 0.38
LIME1-202ENST00000444951 PCDH20Q8N6Y1 951 aaKnown RBP17.44■□□□□ 0.38
LIME1-202ENST00000444951 CNTD1Q8N815 330 aa17.44■□□□□ 0.38
LIME1-202ENST00000444951 KDM1BQ8NB78 822 aa17.44■□□□□ 0.38
LIME1-202ENST00000444951 TSTD1Q8NFU3 115 aa17.44■□□□□ 0.38
LIME1-202ENST00000444951 ATL2Q8NHH9 583 aa17.44■□□□□ 0.38
LIME1-202ENST00000444951 KCNV2Q8TDN2 545 aa17.44■□□□□ 0.38
LIME1-202ENST00000444951 FATE1Q969F0 183 aa17.44■□□□□ 0.38
LIME1-202ENST00000444951 GDAP1L1Q96MZ0 367 aa17.44■□□□□ 0.38
LIME1-202ENST00000444951 PSKH2Q96QS6 385 aa17.44■□□□□ 0.38
LIME1-202ENST00000444951 HECAQ9UBI9 543 aaPredicted RBP17.44■□□□□ 0.38
LIME1-202ENST00000444951 SUN2Q9UH99 717 aa17.44■□□□□ 0.38
LIME1-202ENST00000444951 EVLQ9UI08 416 aaPredicted RBP17.44■□□□□ 0.38
LIME1-202ENST00000444951 DRG1Q9Y295 367 aaKnown RBP17.44■□□□□ 0.38
LIME1-202ENST00000444951 CXorf51AA0A1B0GTR3 108 aa17.43■□□□□ 0.38
LIME1-202ENST00000444951 CCDC188H7C350 402 aa17.43■□□□□ 0.38
LIME1-202ENST00000444951 INSIG1O15503 277 aa17.43■□□□□ 0.38
LIME1-202ENST00000444951 ZSCAN5DPP0CG00 497 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms