RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 CADM4Q8NFZ8 388 aa14.28□□□□□ -0.12
SSBP3-208ENST00000444533 HCAR2Q8TDS4 363 aa14.28□□□□□ -0.12
SSBP3-208ENST00000444533 MAML1Q92585 1016 aa14.28□□□□□ -0.12
SSBP3-208ENST00000444533 RAB7BQ96AH8 199 aa14.28□□□□□ -0.12
SSBP3-208ENST00000444533 LOXL4Q96JB6 756 aa14.28□□□□□ -0.12
SSBP3-208ENST00000444533 ZC3H10Q96K80 434 aaKnown RBP14.28□□□□□ -0.12
SSBP3-208ENST00000444533 OLFM3Q96PB7 478 aa14.28□□□□□ -0.12
SSBP3-208ENST00000444533 NUDCD1Q96RS6 583 aa14.28□□□□□ -0.12
SSBP3-208ENST00000444533 NAP1L3Q99457 506 aaPredicted RBP14.28□□□□□ -0.12
SSBP3-208ENST00000444533 VAT1Q99536 393 aa14.28□□□□□ -0.12
SSBP3-208ENST00000444533 MGME1Q9BQP7 344 aa14.28□□□□□ -0.12
SSBP3-208ENST00000444533 GPR174Q9BXC1 333 aa14.28□□□□□ -0.12
SSBP3-208ENST00000444533 HDAC8Q9BY41 377 aa14.28□□□□□ -0.12
SSBP3-208ENST00000444533 FRMD8P1Q9BZ68 369 aaPredicted RBP14.28□□□□□ -0.12
SSBP3-208ENST00000444533 NEUROG2Q9H2A3 272 aa14.28□□□□□ -0.12
SSBP3-208ENST00000444533 WSB2Q9NYS7 404 aaPredicted RBP14.28□□□□□ -0.12
SSBP3-208ENST00000444533 NCDNQ9UBB6 729 aa14.28□□□□□ -0.12
SSBP3-208ENST00000444533 SAE1Q9UBE0 346 aaPredicted RBP14.28□□□□□ -0.12
SSBP3-208ENST00000444533 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.28□□□□□ -0.123e-6■■■■□ 21.7
SSBP3-208ENST00000444533 WASF2Q9Y6W5 498 aa14.28□□□□□ -0.12
SSBP3-208ENST00000444533 TBC1D3DA0A087WVF3 549 aa14.27□□□□□ -0.13
SSBP3-208ENST00000444533 TBC1D3IA0A087WXS9 549 aa14.27□□□□□ -0.13
SSBP3-208ENST00000444533 TBC1D3EA0A087X179 549 aa14.27□□□□□ -0.13
SSBP3-208ENST00000444533 TBC1D3KA0A087X1G2 549 aa14.27□□□□□ -0.13
SSBP3-208ENST00000444533 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.27□□□□□ -0.13
SSBP3-208ENST00000444533 TBC1D3FA6NER0 549 aaPredicted RBP14.27□□□□□ -0.13
SSBP3-208ENST00000444533 TBC1D3LB9A6J9 549 aa14.27□□□□□ -0.13
SSBP3-208ENST00000444533 KCNK1O00180 336 aa14.27□□□□□ -0.13
SSBP3-208ENST00000444533 JCHAINP01591 159 aa14.27□□□□□ -0.13
SSBP3-208ENST00000444533 CTSLP07711 333 aa14.27□□□□□ -0.13
SSBP3-208ENST00000444533 TBC1D3HP0C7X1 549 aa14.27□□□□□ -0.13
SSBP3-208ENST00000444533 SUOXP51687 545 aa14.27□□□□□ -0.13
SSBP3-208ENST00000444533 EIF3EP60228 445 aaKnown RBP14.27□□□□□ -0.13
SSBP3-208ENST00000444533 IFI35P80217 286 aaPredicted RBP14.27□□□□□ -0.13
SSBP3-208ENST00000444533 OTUD4Q01804 1114 aaKnown RBP14.27□□□□□ -0.13
SSBP3-208ENST00000444533 CNTN1Q12860 1018 aa14.27□□□□□ -0.13
SSBP3-208ENST00000444533 NOMO1Q15155 1222 aa14.27□□□□□ -0.13
SSBP3-208ENST00000444533 PLK5Q496M5 336 aa14.27□□□□□ -0.13
SSBP3-208ENST00000444533 SLC45A4Q5BKX6 768 aa14.27□□□□□ -0.13
SSBP3-208ENST00000444533 LYSMD4Q5XG99 296 aa14.27□□□□□ -0.13
SSBP3-208ENST00000444533 TBC1D3GQ6DHY5 549 aa14.27□□□□□ -0.13
SSBP3-208ENST00000444533 TBC1D3CQ6IPX1 549 aa14.27□□□□□ -0.13
SSBP3-208ENST00000444533 ERAP2Q6P179 960 aa14.27□□□□□ -0.13
SSBP3-208ENST00000444533 DARS2Q6PI48 645 aaKnown RBP14.27□□□□□ -0.13
SSBP3-208ENST00000444533 BRAT1Q6PJG6 821 aa14.27□□□□□ -0.13
SSBP3-208ENST00000444533 RABEPKQ7Z6M1 372 aa14.27□□□□□ -0.13
SSBP3-208ENST00000444533 TTC7BQ86TV6 843 aa14.27□□□□□ -0.13
SSBP3-208ENST00000444533 TMEFF1Q8IYR6 380 aa14.27□□□□□ -0.13
SSBP3-208ENST00000444533 RGL4Q8IZJ4 473 aa14.27□□□□□ -0.13
SSBP3-208ENST00000444533 TBC1D3Q8IZP1 549 aaPredicted RBP14.27□□□□□ -0.13
SSBP3-208ENST00000444533 TEX26Q8N6G2 289 aa14.27□□□□□ -0.13
SSBP3-208ENST00000444533 OR2T34Q8NGX1 318 aa14.27□□□□□ -0.13
SSBP3-208ENST00000444533 SNX19Q92543 992 aa14.27□□□□□ -0.13
SSBP3-208ENST00000444533 LRRC45Q96CN5 670 aa14.27□□□□□ -0.13
SSBP3-208ENST00000444533 KLHL32Q96NJ5 620 aa14.27□□□□□ -0.13
SSBP3-208ENST00000444533 DUSP15Q9H1R2 295 aaPredicted RBP14.27□□□□□ -0.13
SSBP3-208ENST00000444533 SUV39H2Q9H5I1 410 aa14.27□□□□□ -0.13
SSBP3-208ENST00000444533 SARDHQ9UL12 918 aa14.27□□□□□ -0.13
SSBP3-208ENST00000444533 PYCARDQ9ULZ3 195 aa14.27□□□□□ -0.13
SSBP3-208ENST00000444533 C16orf96A6NNT2 1141 aa14.26□□□□□ -0.13
SSBP3-208ENST00000444533 INSIG1O15503 277 aa14.26□□□□□ -0.13
SSBP3-208ENST00000444533 CEP104O60308 925 aa14.26□□□□□ -0.13
SSBP3-208ENST00000444533 SOCS5O75159 536 aa14.26□□□□□ -0.13
SSBP3-208ENST00000444533 PEX11BO96011 259 aa14.26□□□□□ -0.13
SSBP3-208ENST00000444533 SERPINF2P08697 491 aa14.26□□□□□ -0.13
SSBP3-208ENST00000444533 GNSP15586 552 aa14.26□□□□□ -0.13
SSBP3-208ENST00000444533 PECAM1P16284 738 aaPredicted RBP14.26□□□□□ -0.13
SSBP3-208ENST00000444533 GNG11P61952 73 aa14.26□□□□□ -0.13
SSBP3-208ENST00000444533 LPAL2Q16609 132 aa14.26□□□□□ -0.13
SSBP3-208ENST00000444533 PMS2CLQ68D20 193 aa14.26□□□□□ -0.13
SSBP3-208ENST00000444533 CYP2U1Q7Z449 544 aa14.26□□□□□ -0.13
SSBP3-208ENST00000444533 ZSCAN30Q86W11 494 aa14.26□□□□□ -0.13
SSBP3-208ENST00000444533 AADATQ8N5Z0 425 aa14.26□□□□□ -0.13
SSBP3-208ENST00000444533 ACTL9Q8TC94 416 aa14.26□□□□□ -0.13
SSBP3-208ENST00000444533 PDCD6IPQ8WUM4 868 aaKnown RBP14.26□□□□□ -0.13
SSBP3-208ENST00000444533 HTR3CQ8WXA8 447 aa14.26□□□□□ -0.13
SSBP3-208ENST00000444533 PBKQ96KB5 322 aa14.26□□□□□ -0.13
SSBP3-208ENST00000444533 QKIQ96PU8 341 aaKnown RBP eCLIP14.26□□□□□ -0.13
SSBP3-208ENST00000444533 SEMA3CQ99985 751 aa14.26□□□□□ -0.13
SSBP3-208ENST00000444533 PREBQ9HCU5 417 aa14.26□□□□□ -0.13
SSBP3-208ENST00000444533 KLHL8Q9P2G9 620 aaPredicted RBP14.26□□□□□ -0.13
SSBP3-208ENST00000444533 DKK3Q9UBP4 350 aa14.26□□□□□ -0.13
SSBP3-208ENST00000444533 RAPGEFL1Q9UHV5 662 aa14.26□□□□□ -0.13
SSBP3-208ENST00000444533 MBD1Q9UIS9 605 aaPredicted RBP14.26□□□□□ -0.13
SSBP3-208ENST00000444533 TRHDEQ9UKU6 1024 aa14.26□□□□□ -0.13
SSBP3-208ENST00000444533 NYNRINQ9P2P1 1898 aaKnown RBP14.26□□□□□ -0.13
SSBP3-208ENST00000444533 PRR23AA6NEV1 266 aa14.25□□□□□ -0.13
SSBP3-208ENST00000444533 PROB1E7EW31 1015 aa14.25□□□□□ -0.13
SSBP3-208ENST00000444533 ENC1O14682 589 aa14.25□□□□□ -0.13
SSBP3-208ENST00000444533 FSBPO95073 299 aa14.25□□□□□ -0.13
SSBP3-208ENST00000444533 PCDH8O95206 1070 aa14.25□□□□□ -0.13
SSBP3-208ENST00000444533 PIGNO95427 931 aa14.25□□□□□ -0.13
SSBP3-208ENST00000444533 RBP3P10745 1247 aa14.25□□□□□ -0.13
SSBP3-208ENST00000444533 ADRB3P13945 408 aa14.25□□□□□ -0.13
SSBP3-208ENST00000444533 BCKDHBP21953 392 aa14.25□□□□□ -0.13
SSBP3-208ENST00000444533 GKP32189 559 aa14.25□□□□□ -0.13
SSBP3-208ENST00000444533 ACSL1P33121 698 aa14.25□□□□□ -0.13
SSBP3-208ENST00000444533 DRD3P35462 400 aa14.25□□□□□ -0.13
SSBP3-208ENST00000444533 ACTN2P35609 894 aa14.25□□□□□ -0.13
SSBP3-208ENST00000444533 NUDT1P36639 197 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms