RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 TP53BP1Q12888 1972 aaPredicted RBP18.88■□□□□ 0.61
CCDC188-202ENST00000444532 WNT9AO14904 365 aa18.88■□□□□ 0.61
CCDC188-202ENST00000444532 MTA2O94776 668 aa18.88■□□□□ 0.61
CCDC188-202ENST00000444532 WNT1P04628 370 aa18.88■□□□□ 0.61
CCDC188-202ENST00000444532 ADRB1P08588 477 aa18.88■□□□□ 0.61
CCDC188-202ENST00000444532 KRT7P08729 469 aa18.88■□□□□ 0.61
CCDC188-202ENST00000444532 IL4RP24394 825 aa18.88■□□□□ 0.61
CCDC188-202ENST00000444532 SERPINB6P35237 376 aa18.88■□□□□ 0.61
CCDC188-202ENST00000444532 CSNK1DP48730 415 aa18.88■□□□□ 0.61
CCDC188-202ENST00000444532 ARSEP51690 589 aa18.88■□□□□ 0.61
CCDC188-202ENST00000444532 OVGP1Q12889 678 aa18.88■□□□□ 0.61
CCDC188-202ENST00000444532 HNRNPDQ14103 355 aaKnown RBP18.88■□□□□ 0.61
CCDC188-202ENST00000444532 STAT4Q14765 748 aa18.88■□□□□ 0.61
CCDC188-202ENST00000444532 PDK2Q15119 407 aa18.88■□□□□ 0.61
CCDC188-202ENST00000444532 ZNF423Q2M1K9 1284 aa18.88■□□□□ 0.61
CCDC188-202ENST00000444532 ZNF284Q2VY69 593 aa18.88■□□□□ 0.61
CCDC188-202ENST00000444532 KIAA1161Q6NSJ0 714 aa18.88■□□□□ 0.61
CCDC188-202ENST00000444532 LAYNQ6UX15 382 aa18.88■□□□□ 0.61
CCDC188-202ENST00000444532 IQCHQ86VS3 1027 aa18.88■□□□□ 0.61
CCDC188-202ENST00000444532 GAS2L3Q86XJ1 694 aa18.88■□□□□ 0.61
CCDC188-202ENST00000444532 NETO2Q8NC67 525 aa18.88■□□□□ 0.61
CCDC188-202ENST00000444532 KCTD6Q8NC69 237 aa18.88■□□□□ 0.61
CCDC188-202ENST00000444532 DEFB124Q8NES8 71 aa18.88■□□□□ 0.61
CCDC188-202ENST00000444532 HCAR2Q8TDS4 363 aa18.88■□□□□ 0.61
CCDC188-202ENST00000444532 ZNF599Q96NL3 588 aa18.88■□□□□ 0.61
CCDC188-202ENST00000444532 TM7SF3Q9NS93 570 aa18.88■□□□□ 0.61
CCDC188-202ENST00000444532 ETNK2Q9NVF9 386 aa18.88■□□□□ 0.61
CCDC188-202ENST00000444532 DKK3Q9UBP4 350 aa18.88■□□□□ 0.61
CCDC188-202ENST00000444532 FNDC3AQ9Y2H6 1198 aaKnown RBP18.88■□□□□ 0.61
CCDC188-202ENST00000444532 CNOT1A5YKK6 2376 aaKnown RBP18.88■□□□□ 0.61
CCDC188-202ENST00000444532 TLR4O00206 839 aa18.87■□□□□ 0.61
CCDC188-202ENST00000444532 GIPC1O14908 333 aa18.87■□□□□ 0.61
CCDC188-202ENST00000444532 TSPAN6O43657 245 aa18.87■□□□□ 0.61
CCDC188-202ENST00000444532 MAGEC1O60732 1142 aa18.87■□□□□ 0.61
CCDC188-202ENST00000444532 RPS21P63220 83 aaKnown RBP18.87■□□□□ 0.61
CCDC188-202ENST00000444532 NSUN2Q08J23 767 aaKnown RBP eCLIP18.87■□□□□ 0.61
CCDC188-202ENST00000444532 MESDQ14696 234 aa18.87■□□□□ 0.61
CCDC188-202ENST00000444532 SUZ12Q15022 739 aaKnown RBP18.87■□□□□ 0.61
CCDC188-202ENST00000444532 TCEAL1Q15170 157 aa18.87■□□□□ 0.61
CCDC188-202ENST00000444532 ATP13A4Q4VNC1 1196 aa18.87■□□□□ 0.61
CCDC188-202ENST00000444532 TMEM259Q4ZIN3 620 aa18.87■□□□□ 0.61
CCDC188-202ENST00000444532 N4BP2L1Q5TBK1 243 aaPredicted RBP18.87■□□□□ 0.61
CCDC188-202ENST00000444532 TMCO4Q5TGY1 634 aa18.87■□□□□ 0.61
CCDC188-202ENST00000444532 DBX2Q6ZNG2 339 aa18.87■□□□□ 0.61
CCDC188-202ENST00000444532 ARHGAP36Q6ZRI8 547 aa18.87■□□□□ 0.61
CCDC188-202ENST00000444532 TTC7BQ86TV6 843 aa18.87■□□□□ 0.61
CCDC188-202ENST00000444532 LRRC49Q8IUZ0 686 aa18.87■□□□□ 0.61
CCDC188-202ENST00000444532 MAP7D3Q8IWC1 876 aa18.87■□□□□ 0.61
CCDC188-202ENST00000444532 CCDC170Q8IYT3 715 aa18.87■□□□□ 0.61
CCDC188-202ENST00000444532 RFFLQ8WZ73 363 aa18.87■□□□□ 0.61
CCDC188-202ENST00000444532 ZFR2Q9UPR6 939 aaKnown RBP18.87■□□□□ 0.61
CCDC188-202ENST00000444532 SLC31A1O15431 190 aa18.86■□□□□ 0.61
CCDC188-202ENST00000444532 RENBPP51606 427 aa18.86■□□□□ 0.61
CCDC188-202ENST00000444532 SUOXP51687 545 aa18.86■□□□□ 0.61
CCDC188-202ENST00000444532 TAS2R40P59535 323 aa18.86■□□□□ 0.61
CCDC188-202ENST00000444532 MMRN1Q13201 1228 aa18.86■□□□□ 0.61
CCDC188-202ENST00000444532 DPYSL3Q14195 570 aa18.86■□□□□ 0.61
CCDC188-202ENST00000444532 SRLQ86TD4 932 aa18.86■□□□□ 0.61
CCDC188-202ENST00000444532 CPNE8Q86YQ8 564 aa18.86■□□□□ 0.61
CCDC188-202ENST00000444532 TP53INP2Q8IXH6 220 aa18.86■□□□□ 0.61
CCDC188-202ENST00000444532 TSEN2Q8NCE0 465 aaKnown RBP18.86■□□□□ 0.61
CCDC188-202ENST00000444532 EXOC2Q96KP1 924 aa18.86■□□□□ 0.61
CCDC188-202ENST00000444532 ZNF641Q96N77 438 aaPredicted RBP18.86■□□□□ 0.61
CCDC188-202ENST00000444532 PANX2Q96RD6 677 aa18.86■□□□□ 0.61
CCDC188-202ENST00000444532 TUBGCP5Q96RT8 1024 aa18.86■□□□□ 0.61
CCDC188-202ENST00000444532 ZNF670Q9BS34 389 aa18.86■□□□□ 0.61
CCDC188-202ENST00000444532 CINPQ9BW66 212 aaPredicted RBP18.86■□□□□ 0.61
CCDC188-202ENST00000444532 CALN1Q9BXU9 219 aa18.86■□□□□ 0.61
CCDC188-202ENST00000444532 SLC17A9Q9BYT1 436 aa18.86■□□□□ 0.61
CCDC188-202ENST00000444532 TRPM6Q9BX84 2022 aa18.86■□□□□ 0.61
CCDC188-202ENST00000444532 PCNX2A6NKB5 2137 aa18.85■□□□□ 0.61
CCDC188-202ENST00000444532 TMEM110-MUSTN1A8MSY1 372 aa18.85■□□□□ 0.61
CCDC188-202ENST00000444532 H0Y8X5 98 aa18.85■□□□□ 0.61
CCDC188-202ENST00000444532 NEMP1O14524 444 aa18.85■□□□□ 0.61
CCDC188-202ENST00000444532 KCNK3O14649 394 aa18.85■□□□□ 0.61
CCDC188-202ENST00000444532 INSIG1O15503 277 aa18.85■□□□□ 0.61
CCDC188-202ENST00000444532 SH3BP5O60239 455 aa18.85■□□□□ 0.61
CCDC188-202ENST00000444532 LCA5LO95447 670 aa18.85■□□□□ 0.61
CCDC188-202ENST00000444532 CD48P09326 243 aa18.85■□□□□ 0.61
CCDC188-202ENST00000444532 HNRNPA2B1P22626 353 aaKnown RBP18.85■□□□□ 0.61
CCDC188-202ENST00000444532 AKT2P31751 481 aa18.85■□□□□ 0.61
CCDC188-202ENST00000444532 GJC1P36383 396 aa18.85■□□□□ 0.61
CCDC188-202ENST00000444532 ABL2P42684 1182 aa18.85■□□□□ 0.61
CCDC188-202ENST00000444532 CCT8P50990 548 aa18.85■□□□□ 0.61
CCDC188-202ENST00000444532 NXPH1P58417 271 aa18.85■□□□□ 0.61
CCDC188-202ENST00000444532 ANKRD20A8PQ5CZ79 823 aa18.85■□□□□ 0.61
CCDC188-202ENST00000444532 SEL1L3Q68CR1 1132 aa18.85■□□□□ 0.61
CCDC188-202ENST00000444532 NAXDQ8IW45 347 aa18.85■□□□□ 0.61
CCDC188-202ENST00000444532 TMEM145Q8NBT3 493 aa18.85■□□□□ 0.61
CCDC188-202ENST00000444532 FAM174AQ8TBP5 190 aa18.85■□□□□ 0.61
CCDC188-202ENST00000444532 KLK6Q92876 244 aa18.85■□□□□ 0.61
CCDC188-202ENST00000444532 PSKH2Q96QS6 385 aa18.85■□□□□ 0.61
CCDC188-202ENST00000444532 ANP32EQ9BTT0 268 aa18.85■□□□□ 0.61
CCDC188-202ENST00000444532 SUV39H2Q9H5I1 410 aa18.85■□□□□ 0.61
CCDC188-202ENST00000444532 ERVMER34-1Q9H9K5 563 aa18.85■□□□□ 0.61
CCDC188-202ENST00000444532 GDF3Q9NR23 364 aa18.85■□□□□ 0.61
CCDC188-202ENST00000444532 SEPT3Q9UH03 358 aa18.85■□□□□ 0.61
CCDC188-202ENST00000444532 KNL1Q8NG31 2342 aa18.84■□□□□ 0.61
CCDC188-202ENST00000444532 AREL1O15033 823 aa18.84■□□□□ 0.61
CCDC188-202ENST00000444532 PCDHGA12O60330 932 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms