RNA–Protein interactions for RNA: ENST00000444191.5

HCFC1-203, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 3,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-203ENST00000444191 GSTA4O15217 222 aa11.76□□□□□ -0.53
HCFC1-203ENST00000444191 LRIG2O94898 1065 aa11.76□□□□□ -0.53
HCFC1-203ENST00000444191 NCK1P16333 377 aa11.76□□□□□ -0.53
HCFC1-203ENST00000444191 RAB10P61026 200 aa11.76□□□□□ -0.53
HCFC1-203ENST00000444191 MAPRE2Q15555 327 aa11.76□□□□□ -0.53
HCFC1-203ENST00000444191 AGAP9Q5VTM2 703 aa11.76□□□□□ -0.53
HCFC1-203ENST00000444191 SH2D5Q6ZV89 423 aa11.76□□□□□ -0.53
HCFC1-203ENST00000444191 MIER2Q8N344 545 aa11.76□□□□□ -0.53
HCFC1-203ENST00000444191 CBR4Q8N4T8 237 aa11.76□□□□□ -0.53
HCFC1-203ENST00000444191 EFHBQ8N7U6 833 aa11.76□□□□□ -0.53
HCFC1-203ENST00000444191 ARNTL2Q8WYA1 636 aa11.76□□□□□ -0.53
HCFC1-203ENST00000444191 PLEKHG4BQ96PX9 1271 aa11.76□□□□□ -0.53
HCFC1-203ENST00000444191 C1orf50Q9BV19 199 aa11.76□□□□□ -0.53
HCFC1-203ENST00000444191 IL22Q9GZX6 179 aa11.76□□□□□ -0.53
HCFC1-203ENST00000444191 IPO11Q9UI26 975 aaKnown RBP11.76□□□□□ -0.53
HCFC1-203ENST00000444191 C1orf232A0A0U1RR37 186 aa11.76□□□□□ -0.53
HCFC1-203ENST00000444191 MYBPHLA2RUH7 354 aa11.76□□□□□ -0.53
HCFC1-203ENST00000444191 AP2A1O95782 977 aa11.76□□□□□ -0.53
HCFC1-203ENST00000444191 APOA4P06727 396 aa11.76□□□□□ -0.53
HCFC1-203ENST00000444191 LINC00032P0C843 101 aa11.76□□□□□ -0.53
HCFC1-203ENST00000444191 NR1H2P55055 460 aa11.76□□□□□ -0.53
HCFC1-203ENST00000444191 CDKL1Q00532 357 aa11.76□□□□□ -0.53
HCFC1-203ENST00000444191 BEX3Q00994 111 aa11.76□□□□□ -0.53
HCFC1-203ENST00000444191 MAP3K10Q02779 954 aa11.76□□□□□ -0.53
HCFC1-203ENST00000444191 ZFP1Q6P2D0 407 aa11.76□□□□□ -0.53
HCFC1-203ENST00000444191 DDI1Q8WTU0 396 aa11.76□□□□□ -0.53
HCFC1-203ENST00000444191 CANT1Q8WVQ1 401 aa11.76□□□□□ -0.53
HCFC1-203ENST00000444191 FAM8A1Q9UBU6 413 aa11.76□□□□□ -0.53
HCFC1-203ENST00000444191 PTGDR2Q9Y5Y4 395 aa11.76□□□□□ -0.53
HCFC1-203ENST00000444191 TRIP11Q15643 1979 aa11.76□□□□□ -0.53
HCFC1-203ENST00000444191 TRIM38O00635 465 aa11.75□□□□□ -0.53
HCFC1-203ENST00000444191 ZSCAN9O15535 394 aaPredicted RBP11.75□□□□□ -0.53
HCFC1-203ENST00000444191 CABYRO75952 493 aa11.75□□□□□ -0.53
HCFC1-203ENST00000444191 TRAF2Q12933 501 aa11.75□□□□□ -0.53
HCFC1-203ENST00000444191 RBM20Q5T481 1227 aaKnown RBP11.75□□□□□ -0.53
HCFC1-203ENST00000444191 GPR152Q8TDT2 470 aa11.75□□□□□ -0.53
HCFC1-203ENST00000444191 TRPC4APQ8TEL6 797 aa11.75□□□□□ -0.53
HCFC1-203ENST00000444191 SDCCAG3Q96C92 435 aa11.75□□□□□ -0.53
HCFC1-203ENST00000444191 ZFRQ96KR1 1074 aaKnown RBP11.75□□□□□ -0.53
HCFC1-203ENST00000444191 SENP8Q96LD8 212 aa11.75□□□□□ -0.53
HCFC1-203ENST00000444191 RNF145Q96MT1 663 aa11.75□□□□□ -0.53
HCFC1-203ENST00000444191 TBL1YQ9BQ87 522 aa11.75□□□□□ -0.53
HCFC1-203ENST00000444191 POLR1BQ9H9Y6 1135 aa11.75□□□□□ -0.53
HCFC1-203ENST00000444191 ABI2Q9NYB9 513 aaPredicted RBP11.75□□□□□ -0.53
HCFC1-203ENST00000444191 FZD10Q9ULW2 581 aa11.75□□□□□ -0.53
HCFC1-203ENST00000444191 PPME1Q9Y570 386 aa11.75□□□□□ -0.53
HCFC1-203ENST00000444191 TIMM22Q9Y584 194 aa11.75□□□□□ -0.53
HCFC1-203ENST00000444191 FAM189A1O60320 539 aa11.75□□□□□ -0.53
HCFC1-203ENST00000444191 CPB1P15086 417 aa11.75□□□□□ -0.53
HCFC1-203ENST00000444191 PSMA4P25789 261 aaKnown RBP11.75□□□□□ -0.53
HCFC1-203ENST00000444191 NFYCQ13952 458 aa11.75□□□□□ -0.53
HCFC1-203ENST00000444191 INPP5AQ14642 412 aa11.75□□□□□ -0.53
HCFC1-203ENST00000444191 GPR158Q5T848 1215 aa11.75□□□□□ -0.53
HCFC1-203ENST00000444191 ZNF512Q96ME7 567 aaPredicted RBP11.75□□□□□ -0.53
HCFC1-203ENST00000444191 PLAC1Q9HBJ0 212 aa11.75□□□□□ -0.53
HCFC1-203ENST00000444191 OXSMQ9NWU1 459 aa11.75□□□□□ -0.53
HCFC1-203ENST00000444191 RSL24D1Q9UHA3 163 aaKnown RBP11.75□□□□□ -0.53
HCFC1-203ENST00000444191 DOCK5Q9H7D0 1870 aa11.75□□□□□ -0.53
HCFC1-203ENST00000444191 SBF2Q86WG5 1849 aa11.75□□□□□ -0.53
HCFC1-203ENST00000444191 PTGES3LE9PB15 166 aa11.75□□□□□ -0.53
HCFC1-203ENST00000444191 AURKAO14965 403 aa11.75□□□□□ -0.53
HCFC1-203ENST00000444191 SIX3O95343 332 aaPredicted RBP11.75□□□□□ -0.53
HCFC1-203ENST00000444191 SNRPB2P08579 225 aaKnown RBP11.75□□□□□ -0.53
HCFC1-203ENST00000444191 CHRM3P20309 590 aa11.75□□□□□ -0.53
HCFC1-203ENST00000444191 STT3AP46977 705 aa11.75□□□□□ -0.53
HCFC1-203ENST00000444191 SLC26A2P50443 739 aa11.75□□□□□ -0.53
HCFC1-203ENST00000444191 SLC44A4Q53GD3 710 aa11.75□□□□□ -0.53
HCFC1-203ENST00000444191 CYP4V2Q6ZWL3 525 aaPredicted RBP11.75□□□□□ -0.53
HCFC1-203ENST00000444191 CUZD1Q86UP6 607 aa11.75□□□□□ -0.53
HCFC1-203ENST00000444191 ZDHHC17Q8IUH5 632 aa11.75□□□□□ -0.53
HCFC1-203ENST00000444191 PGAM4Q8N0Y7 254 aa11.75□□□□□ -0.53
HCFC1-203ENST00000444191 TMEM174Q8WUU8 243 aa11.75□□□□□ -0.53
HCFC1-203ENST00000444191 DGCR6LQ9BY27 220 aa11.75□□□□□ -0.53
HCFC1-203ENST00000444191 RHOJQ9H4E5 214 aa11.75□□□□□ -0.53
HCFC1-203ENST00000444191 STN1Q9H668 368 aaKnown RBP11.75□□□□□ -0.53
HCFC1-203ENST00000444191 PRPF19Q9UMS4 504 aaKnown RBP11.75□□□□□ -0.53
HCFC1-203ENST00000444191 MAN1A2O60476 641 aa11.74□□□□□ -0.53
HCFC1-203ENST00000444191 ZNF189O75820 626 aaPredicted RBP11.74□□□□□ -0.53
HCFC1-203ENST00000444191 SLC25A27O95847 323 aa11.74□□□□□ -0.53
HCFC1-203ENST00000444191 MTHFD1P11586 935 aaKnown RBP11.74□□□□□ -0.53
HCFC1-203ENST00000444191 MLNP12872 115 aa11.74□□□□□ -0.53
HCFC1-203ENST00000444191 RPS12P25398 132 aaKnown RBP11.74□□□□□ -0.53
HCFC1-203ENST00000444191 PTPN9P43378 593 aa11.74□□□□□ -0.53
HCFC1-203ENST00000444191 LSM3P62310 102 aaKnown RBP11.74□□□□□ -0.53
HCFC1-203ENST00000444191 METTL23Q86XA0 190 aa11.74□□□□□ -0.53
HCFC1-203ENST00000444191 SHCBP1Q8NEM2 672 aa11.74□□□□□ -0.53
HCFC1-203ENST00000444191 MTG1Q9BT17 334 aaPredicted RBP11.74□□□□□ -0.53
HCFC1-203ENST00000444191 MRPS26Q9BYN8 205 aaKnown RBP11.74□□□□□ -0.53
HCFC1-203ENST00000444191 ZNFX1Q9P2E3 1918 aaKnown RBP11.74□□□□□ -0.53
HCFC1-203ENST00000444191 MATN2O00339 956 aa11.74□□□□□ -0.53
HCFC1-203ENST00000444191 USP2O75604 605 aaPredicted RBP11.74□□□□□ -0.53
HCFC1-203ENST00000444191 ASLP04424 464 aa11.74□□□□□ -0.53
HCFC1-203ENST00000444191 PRKCGP05129 697 aa11.74□□□□□ -0.53
HCFC1-203ENST00000444191 PABPC4LP0CB38 370 aaKnown RBP11.74□□□□□ -0.53
HCFC1-203ENST00000444191 IMPDH2P12268 514 aa11.74□□□□□ -0.53
HCFC1-203ENST00000444191 PTPRCAPQ14761 206 aa11.74□□□□□ -0.53
HCFC1-203ENST00000444191 INSCQ1MX18 579 aa11.74□□□□□ -0.53
HCFC1-203ENST00000444191 FAM35AQ86V20 835 aa11.74□□□□□ -0.53
HCFC1-203ENST00000444191 KBTBD6Q86V97 674 aa11.74□□□□□ -0.53
HCFC1-203ENST00000444191 CDCA5Q96FF9 252 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms