RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 ISPDA4D126 451 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 GPR25O00155 361 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 MYCLP1P12525 358 aaPredicted RBP5.07□□□□□ -1.6
HERC1-201ENST00000443617 HNRNPLP14866 589 aaKnown RBP eCLIP5.07□□□□□ -1.65e-11■■■■□ 21.9
HERC1-201ENST00000443617 SLC25A11Q02978 314 aaKnown RBP5.07□□□□□ -1.6
HERC1-201ENST00000443617 SPANXN3Q5MJ09 141 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 MPP5Q8N3R9 675 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 SPATA6LQ8N4H0 392 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 ANKRD52Q8NB46 1076 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 BSNDQ8WZ55 320 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 TARS2Q9BW92 718 aaKnown RBP5.07□□□□□ -1.6
HERC1-201ENST00000443617 IL22Q9GZX6 179 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 APOBEC3GQ9HC16 384 aaKnown RBP5.07□□□□□ -1.6
HERC1-201ENST00000443617 KLHL8Q9P2G9 620 aaPredicted RBP5.07□□□□□ -1.6
HERC1-201ENST00000443617 KLQ9UEF7 1012 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 FEM1BQ9UK73 627 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 MAGED2Q9UNF1 606 aaPredicted RBP5.07□□□□□ -1.6
HERC1-201ENST00000443617 NFASCO94856 1347 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 DYRK3O43781 588 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 TOMM70O94826 608 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 FSTL4Q6MZW2 842 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 UGT3A1Q6NUS8 523 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 BPHLQ86WA6 291 aaPredicted RBP5.07□□□□□ -1.6
HERC1-201ENST00000443617 ZFP90Q8TF47 636 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 C20orf27Q9GZN8 174 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 LRRC40Q9H9A6 602 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 NANOGQ9H9S0 305 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 CYP4F12Q9HCS2 524 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.07□□□□□ -1.62e-6■■■□□ 16.8
HERC1-201ENST00000443617 PRR12Q9ULL5 1215 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 PCDHGA7Q9Y5G6 932 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 PDZK1P1A8MUH7 402 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 CYP2F1P24903 491 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 GSTM2P28161 218 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 GLRBP48167 497 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 FCHO2Q0JRZ9 810 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 C14orf80Q86SX3 495 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 RAB43Q86YS6 212 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 AURKBQ96GD4 344 aaPredicted RBP5.07□□□□□ -1.6
HERC1-201ENST00000443617 MED30Q96HR3 178 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 NAA50Q9GZZ1 169 aaKnown RBP5.07□□□□□ -1.6
HERC1-201ENST00000443617 GGA3Q9NZ52 723 aa5.07□□□□□ -1.6
HERC1-201ENST00000443617 SRP68Q9UHB9 627 aaKnown RBP5.07□□□□□ -1.6
HERC1-201ENST00000443617 CCDC78A2IDD5 438 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 HMX2A2RU54 273 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 ARPC2O15144 300 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 DYNC1LI2O43237 492 aaPredicted RBP5.06□□□□□ -1.6
HERC1-201ENST00000443617 MTMR1Q13613 665 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 CYBRD1Q53TN4 286 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 ZNF667Q5HYK9 610 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 ZNF669Q96BR6 464 aaPredicted RBP5.06□□□□□ -1.6
HERC1-201ENST00000443617 CEP295NLQ96MC4 621 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 QKIQ96PU8 341 aaKnown RBP eCLIP5.06□□□□□ -1.65e-8■■■■■ 27.4
HERC1-201ENST00000443617 IPPQ9Y573 584 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 TLL2Q9Y6L7 1015 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 XYLBO75191 536 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 LYPLA2O95372 231 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 PTGS2P35354 604 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 TNFAIP2Q03169 654 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 SLC10A2Q12908 348 aaPredicted RBP5.06□□□□□ -1.6
HERC1-201ENST00000443617 TRAF3Q13114 568 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 PSMD5Q16401 504 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 RC3H1Q5TC82 1133 aaKnown RBP5.06□□□□□ -1.6
HERC1-201ENST00000443617 REP15Q6BDI9 236 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 SWSAP1Q6NVH7 229 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 TICAM1Q8IUC6 712 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 MCOLN3Q8TDD5 553 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 APOL4Q9BPW4 351 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 MTMR12Q9C0I1 747 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 DIP2CQ9Y2E4 1556 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 SYNJ2BP-COX16A0A087WUM0 186 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 CREB5Q02930 508 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 C15orf59Q2T9L4 293 aaPredicted RBP5.06□□□□□ -1.6
HERC1-201ENST00000443617 EML3Q32P44 896 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 FUT11Q495W5 492 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 CMASQ8NFW8 434 aaPredicted RBP5.06□□□□□ -1.6
HERC1-201ENST00000443617 URGCPQ8TCY9 931 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 ZNF516Q92618 1163 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 TSPAN17Q96FV3 270 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 USE1Q9NZ43 259 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 COX16Q9P0S2 106 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 LINC00854A0A1B0GVQ3 168 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 KRT87PA6NCN2 255 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 DGAT1O75907 488 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 PIWIL4Q7Z3Z4 852 aaKnown RBP5.06□□□□□ -1.6
HERC1-201ENST00000443617 DSG4Q86SJ6 1040 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 CRYGNQ8WXF5 182 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 FIG4Q92562 907 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 LGMNQ99538 433 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 ZBTB18Q99592 522 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 LHPPQ9H008 270 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 TPRKBQ9Y3C4 175 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 CABYRO75952 493 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 MAGP20916 626 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 HSD17B4P51659 736 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 MAP3K7CLP57077 242 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 TRAPPC3LQ5T215 181 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 CHST15Q7LFX5 561 aaPredicted RBP5.06□□□□□ -1.6
HERC1-201ENST00000443617 CMTR2Q8IYT2 770 aaKnown RBP5.06□□□□□ -1.6
HERC1-201ENST00000443617 ZNF560Q96MR9 790 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms