RNA–Protein interactions for RNA: ENST00000443197.5

CALD1-210, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-210ENST00000443197 GRIA4P48058 902 aa10.7□□□□□ -0.7
CALD1-210ENST00000443197 USP46P62068 366 aa10.7□□□□□ -0.7
CALD1-210ENST00000443197 BCL2L1Q07817 233 aa10.7□□□□□ -0.7
CALD1-210ENST00000443197 UBAP2LQ14157 1087 aaKnown RBP10.7□□□□□ -0.7
CALD1-210ENST00000443197 C6orf10Q5SRN2 563 aa10.7□□□□□ -0.7
CALD1-210ENST00000443197 VWA5B1Q5TIE3 1220 aa10.7□□□□□ -0.7
CALD1-210ENST00000443197 ICE2Q659A1 982 aa10.7□□□□□ -0.7
CALD1-210ENST00000443197 TXNDC8Q6A555 127 aa10.7□□□□□ -0.7
CALD1-210ENST00000443197 REM2Q8IYK8 340 aaPredicted RBP10.7□□□□□ -0.7
CALD1-210ENST00000443197 EFCAB3Q8N7B9 438 aa10.7□□□□□ -0.7
CALD1-210ENST00000443197 N4BP2L2Q92802 583 aaPredicted RBP10.7□□□□□ -0.7
CALD1-210ENST00000443197 PBXIP1Q96AQ6 731 aa10.7□□□□□ -0.7
CALD1-210ENST00000443197 TXLNGYQ9BZA5 131 aa10.7□□□□□ -0.7
CALD1-210ENST00000443197 IGSF9Q9P2J2 1179 aa10.7□□□□□ -0.7
CALD1-210ENST00000443197 KNL1Q8NG31 2342 aa10.7□□□□□ -0.7
CALD1-210ENST00000443197 TK2O00142 265 aa10.7□□□□□ -0.7
CALD1-210ENST00000443197 CCL16O15467 120 aa10.7□□□□□ -0.7
CALD1-210ENST00000443197 BPGMP07738 259 aa10.7□□□□□ -0.7
CALD1-210ENST00000443197 TFEBP19484 476 aa10.7□□□□□ -0.7
CALD1-210ENST00000443197 NFKBIAP25963 317 aa10.7□□□□□ -0.7
CALD1-210ENST00000443197 GNA12Q03113 381 aa10.7□□□□□ -0.7
CALD1-210ENST00000443197 WASHC5Q12768 1159 aa10.7□□□□□ -0.7
CALD1-210ENST00000443197 PFKFB4Q16877 469 aa10.7□□□□□ -0.7
CALD1-210ENST00000443197 THEMIS2Q5TEJ8 643 aa10.7□□□□□ -0.7
CALD1-210ENST00000443197 LRRC8EQ6NSJ5 796 aa10.7□□□□□ -0.7
CALD1-210ENST00000443197 PNPLA1Q8N8W4 532 aa10.7□□□□□ -0.7
CALD1-210ENST00000443197 ZNF317Q96PQ6 595 aaPredicted RBP10.7□□□□□ -0.7
CALD1-210ENST00000443197 HAPLN3Q96S86 360 aa10.7□□□□□ -0.7
CALD1-210ENST00000443197 CATSPERZQ9NTU4 200 aa10.7□□□□□ -0.7
CALD1-210ENST00000443197 CFAP97Q9P2B7 532 aa10.7□□□□□ -0.7
CALD1-210ENST00000443197 ANGPTL2Q9UKU9 493 aa10.7□□□□□ -0.7
CALD1-210ENST00000443197 CEP290O15078 2479 aa10.7□□□□□ -0.7
CALD1-210ENST00000443197 TCRBV5S1A1TA0A578 114 aa10.69□□□□□ -0.7
CALD1-210ENST00000443197 TLL1O43897 1013 aa10.69□□□□□ -0.7
CALD1-210ENST00000443197 RBP1P09455 135 aa10.69□□□□□ -0.7
CALD1-210ENST00000443197 CALB2P22676 271 aa10.69□□□□□ -0.7
CALD1-210ENST00000443197 PTPN4P29074 926 aa10.69□□□□□ -0.7
CALD1-210ENST00000443197 CTGFP29279 349 aa10.69□□□□□ -0.7
CALD1-210ENST00000443197 EPHA3P29320 983 aa10.69□□□□□ -0.7
CALD1-210ENST00000443197 ABCE1P61221 599 aaKnown RBP10.69□□□□□ -0.7
CALD1-210ENST00000443197 CYP4F8P98187 520 aa10.69□□□□□ -0.7
CALD1-210ENST00000443197 BTKQ06187 659 aa10.69□□□□□ -0.7
CALD1-210ENST00000443197 TRIP4Q15650 581 aaPredicted RBP10.69□□□□□ -0.7
CALD1-210ENST00000443197 PTPRNQ16849 979 aa10.69□□□□□ -0.7
CALD1-210ENST00000443197 OR4K2Q8NGD2 314 aa10.69□□□□□ -0.7
CALD1-210ENST00000443197 CXorf38Q8TB03 319 aa10.69□□□□□ -0.7
CALD1-210ENST00000443197 APBB2Q92870 758 aa10.69□□□□□ -0.7
CALD1-210ENST00000443197 NXNL1Q96CM4 212 aa10.69□□□□□ -0.7
CALD1-210ENST00000443197 SLC2A6Q9UGQ3 507 aa10.69□□□□□ -0.7
CALD1-210ENST00000443197 TLR6Q9Y2C9 796 aa10.69□□□□□ -0.7
CALD1-210ENST00000443197 CPQQ9Y646 472 aa10.69□□□□□ -0.7
CALD1-210ENST00000443197 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.69□□□□□ -0.7
CALD1-210ENST00000443197 BTN3A1O00481 513 aa10.69□□□□□ -0.7
CALD1-210ENST00000443197 KATNA1O75449 491 aa10.69□□□□□ -0.7
CALD1-210ENST00000443197 HIST1H2AGP0C0S8 130 aaPredicted RBP10.69□□□□□ -0.7
CALD1-210ENST00000443197 HIST1H2ADP20671 130 aa10.69□□□□□ -0.7
CALD1-210ENST00000443197 CRABP2P29373 138 aa10.69□□□□□ -0.7
CALD1-210ENST00000443197 RGS4P49798 205 aa10.69□□□□□ -0.7
CALD1-210ENST00000443197 RAB10P61026 200 aa10.69□□□□□ -0.7
CALD1-210ENST00000443197 GALNTL6Q49A17 601 aa10.69□□□□□ -0.7
CALD1-210ENST00000443197 DNAL1Q4LDG9 190 aa10.69□□□□□ -0.7
CALD1-210ENST00000443197 ARMC12Q5T9G4 340 aa10.69□□□□□ -0.7
CALD1-210ENST00000443197 ANGPTL8Q6UXH0 198 aa10.69□□□□□ -0.7
CALD1-210ENST00000443197 YAF2Q8IY57 180 aa10.69□□□□□ -0.7
CALD1-210ENST00000443197 HIST1H2AHQ96KK5 128 aa10.69□□□□□ -0.7
CALD1-210ENST00000443197 HIST1H2AJQ99878 128 aa10.69□□□□□ -0.7
CALD1-210ENST00000443197 H2AFJQ9BTM1 129 aa10.69□□□□□ -0.7
CALD1-210ENST00000443197 C2orf49Q9BVC5 232 aaPredicted RBP10.69□□□□□ -0.7
CALD1-210ENST00000443197 MRPL1Q9BYD6 325 aaKnown RBP10.69□□□□□ -0.7
CALD1-210ENST00000443197 TRIM54Q9BYV2 358 aa10.69□□□□□ -0.7
CALD1-210ENST00000443197 ASAH2Q9NR71 780 aa10.69□□□□□ -0.7
CALD1-210ENST00000443197 NDE1Q9NXR1 346 aa10.69□□□□□ -0.7
CALD1-210ENST00000443197 TAS2R13Q9NYV9 303 aa10.69□□□□□ -0.7
CALD1-210ENST00000443197 NME7Q9Y5B8 376 aa10.69□□□□□ -0.7
CALD1-210ENST00000443197 RAD54BQ9Y620 910 aa10.69□□□□□ -0.7
CALD1-210ENST00000443197 SRRM3A6NNA2 597 aaPredicted RBP10.69□□□□□ -0.7
CALD1-210ENST00000443197 TCEA3O75764 348 aa10.69□□□□□ -0.7
CALD1-210ENST00000443197 PDE5AO76074 875 aa10.69□□□□□ -0.7
CALD1-210ENST00000443197 AP2B1P63010 937 aa10.69□□□□□ -0.7
CALD1-210ENST00000443197 IL1RL1Q01638 556 aa10.69□□□□□ -0.7
CALD1-210ENST00000443197 HNRNPDQ14103 355 aaKnown RBP10.69□□□□□ -0.7
CALD1-210ENST00000443197 PDE1CQ14123 709 aaPredicted RBP10.69□□□□□ -0.7
CALD1-210ENST00000443197 PAFAH1B3Q15102 231 aaKnown RBP10.69□□□□□ -0.7
CALD1-210ENST00000443197 RCN1Q15293 331 aa10.69□□□□□ -0.7
CALD1-210ENST00000443197 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.69□□□□□ -0.7
CALD1-210ENST00000443197 USP13Q92995 863 aaPredicted RBP10.69□□□□□ -0.7
CALD1-210ENST00000443197 ZNF778Q96MU6 729 aa10.69□□□□□ -0.7
CALD1-210ENST00000443197 SLC2A13Q96QE2 648 aa10.69□□□□□ -0.7
CALD1-210ENST00000443197 MLPHQ9BV36 600 aaPredicted RBP10.69□□□□□ -0.7
CALD1-210ENST00000443197 NMUR2Q9GZQ4 415 aa10.69□□□□□ -0.7
CALD1-210ENST00000443197 ZDHHC6Q9H6R6 413 aa10.69□□□□□ -0.7
CALD1-210ENST00000443197 WDR55Q9H6Y2 383 aaPredicted RBP10.69□□□□□ -0.7
CALD1-210ENST00000443197 FSBPO95073 299 aa10.69□□□□□ -0.7
CALD1-210ENST00000443197 UNC5CO95185 931 aa10.69□□□□□ -0.7
CALD1-210ENST00000443197 GPR17Q13304 367 aa10.69□□□□□ -0.7
CALD1-210ENST00000443197 PKDCCQ504Y2 493 aa10.69□□□□□ -0.7
CALD1-210ENST00000443197 DNAJB7Q7Z6W7 309 aaPredicted RBP10.69□□□□□ -0.7
CALD1-210ENST00000443197 LRRC49Q8IUZ0 686 aa10.69□□□□□ -0.7
CALD1-210ENST00000443197 TBC1D10AQ9BXI6 508 aa10.69□□□□□ -0.7
CALD1-210ENST00000443197 EMILIN2Q9BXX0 1053 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms