RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 SSC4DQ8WTU2 575 aa6.62□□□□□ -1.35
HDAC6-210ENST00000441703 IRGQQ8WZA9 623 aa6.62□□□□□ -1.35
HDAC6-210ENST00000441703 BHMTQ93088 406 aa6.62□□□□□ -1.35
HDAC6-210ENST00000441703 NR1H4Q96RI1 486 aaPredicted RBP6.62□□□□□ -1.35
HDAC6-210ENST00000441703 NAP1L3Q99457 506 aaPredicted RBP6.62□□□□□ -1.35
HDAC6-210ENST00000441703 C7orf25Q9BPX7 421 aa6.62□□□□□ -1.35
HDAC6-210ENST00000441703 SLC4A5Q9BY07 1137 aa6.62□□□□□ -1.35
HDAC6-210ENST00000441703 NEUROG2Q9H2A3 272 aa6.62□□□□□ -1.35
HDAC6-210ENST00000441703 LRMDAQ9H2I8 198 aa6.62□□□□□ -1.35
HDAC6-210ENST00000441703 PABPC3Q9H361 631 aaKnown RBP6.62□□□□□ -1.35
HDAC6-210ENST00000441703 KBTBD4Q9NVX7 518 aa6.62□□□□□ -1.35
HDAC6-210ENST00000441703 IL1RAPL1Q9NZN1 696 aa6.62□□□□□ -1.35
HDAC6-210ENST00000441703 LSM7Q9UK45 103 aaKnown RBP6.62□□□□□ -1.35
HDAC6-210ENST00000441703 NCKAP1Q9Y2A7 1128 aa6.62□□□□□ -1.35
HDAC6-210ENST00000441703 LRCH1Q9Y2L9 728 aa6.62□□□□□ -1.35
HDAC6-210ENST00000441703 UTP11Q9Y3A2 253 aaKnown RBP6.62□□□□□ -1.35
HDAC6-210ENST00000441703 PCDHGA8Q9Y5G5 932 aa6.62□□□□□ -1.35
HDAC6-210ENST00000441703 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.62□□□□□ -1.35
HDAC6-210ENST00000441703 BOD1L1Q8NFC6 3051 aa6.61□□□□□ -1.35
HDAC6-210ENST00000441703 A0A0A6YYK5 440 aaPredicted RBP6.61□□□□□ -1.35
HDAC6-210ENST00000441703 CDRT15L2A8MXV6 281 aa6.61□□□□□ -1.35
HDAC6-210ENST00000441703 K7ENM7 598 aa6.61□□□□□ -1.35
HDAC6-210ENST00000441703 GABRDO14764 452 aa6.61□□□□□ -1.35
HDAC6-210ENST00000441703 COCHO43405 550 aa6.61□□□□□ -1.35
HDAC6-210ENST00000441703 HNRNPCL1O60812 293 aaKnown RBP6.61□□□□□ -1.35
HDAC6-210ENST00000441703 SDC3O75056 442 aa6.61□□□□□ -1.35
HDAC6-210ENST00000441703 UNC5CO95185 931 aa6.61□□□□□ -1.35
HDAC6-210ENST00000441703 IL18RAPO95256 599 aa6.61□□□□□ -1.35
HDAC6-210ENST00000441703 WNT1P04628 370 aa6.61□□□□□ -1.35
HDAC6-210ENST00000441703 CCDC166P0CW27 439 aa6.61□□□□□ -1.35
HDAC6-210ENST00000441703 ALPPL2P10696 532 aa6.61□□□□□ -1.35
HDAC6-210ENST00000441703 BDNFP23560 247 aa6.61□□□□□ -1.35
HDAC6-210ENST00000441703 PRKCHP24723 683 aa6.61□□□□□ -1.35
HDAC6-210ENST00000441703 POLR2BP30876 1174 aaKnown RBP6.61□□□□□ -1.35
HDAC6-210ENST00000441703 FLT3P36888 993 aa6.61□□□□□ -1.35
HDAC6-210ENST00000441703 VHLP40337 213 aa6.61□□□□□ -1.35
HDAC6-210ENST00000441703 STAT6P42226 847 aa6.61□□□□□ -1.35
HDAC6-210ENST00000441703 RXRGP48443 463 aa6.61□□□□□ -1.35
HDAC6-210ENST00000441703 RASSF2P50749 326 aa6.61□□□□□ -1.35
HDAC6-210ENST00000441703 PMS2P54278 862 aa6.61□□□□□ -1.35
HDAC6-210ENST00000441703 POLE2P56282 527 aa6.61□□□□□ -1.35
HDAC6-210ENST00000441703 NXPH1P58417 271 aa6.61□□□□□ -1.35
HDAC6-210ENST00000441703 ZBTB16Q05516 673 aa6.61□□□□□ -1.35
HDAC6-210ENST00000441703 EHHADHQ08426 723 aa6.61□□□□□ -1.35
HDAC6-210ENST00000441703 KCNAB2Q13303 367 aa6.61□□□□□ -1.35
HDAC6-210ENST00000441703 ZNF211Q13398 564 aaPredicted RBP6.61□□□□□ -1.35
HDAC6-210ENST00000441703 LSAMPQ13449 338 aa6.61□□□□□ -1.35
HDAC6-210ENST00000441703 ZNF234Q14588 700 aa6.61□□□□□ -1.35
HDAC6-210ENST00000441703 MYBPC3Q14896 1274 aa6.61□□□□□ -1.35
HDAC6-210ENST00000441703 KPNB1Q14974 876 aaKnown RBP6.61□□□□□ -1.35
HDAC6-210ENST00000441703 MAPRE1Q15691 268 aaKnown RBP6.61□□□□□ -1.35
HDAC6-210ENST00000441703 SLC18A3Q16572 532 aa6.61□□□□□ -1.35
HDAC6-210ENST00000441703 ISXQ2M1V0 245 aa6.61□□□□□ -1.35
HDAC6-210ENST00000441703 SH2D4BQ5SQS7 431 aa6.61□□□□□ -1.35
HDAC6-210ENST00000441703 HECTD3Q5T447 861 aa6.61□□□□□ -1.35
HDAC6-210ENST00000441703 DUPD1Q68J44 220 aa6.61□□□□□ -1.35
HDAC6-210ENST00000441703 ANKRD40Q6AI12 368 aa6.61□□□□□ -1.35
HDAC6-210ENST00000441703 SLC39A4Q6P5W5 647 aa6.61□□□□□ -1.35
HDAC6-210ENST00000441703 RRAGAQ7L523 313 aa6.61□□□□□ -1.35
HDAC6-210ENST00000441703 SLFN11Q7Z7L1 901 aa6.61□□□□□ -1.35
HDAC6-210ENST00000441703 CLEC14AQ86T13 490 aa6.61□□□□□ -1.35
HDAC6-210ENST00000441703 ZC3H18Q86VM9 953 aaKnown RBP6.61□□□□□ -1.35
HDAC6-210ENST00000441703 JAMLQ86YT9 394 aa6.61□□□□□ -1.35
HDAC6-210ENST00000441703 ADGRF2Q8IZF7 708 aa6.61□□□□□ -1.35
HDAC6-210ENST00000441703 KCTD17Q8N5Z5 321 aa6.61□□□□□ -1.35
HDAC6-210ENST00000441703 TOP6BLQ8N6T0 577 aa6.61□□□□□ -1.35
HDAC6-210ENST00000441703 C4orf32Q8N8J7 132 aa6.61□□□□□ -1.35
HDAC6-210ENST00000441703 WDR36Q8NI36 951 aaKnown RBP6.61□□□□□ -1.35
HDAC6-210ENST00000441703 CKAP2Q8WWK9 683 aa6.61□□□□□ -1.35
HDAC6-210ENST00000441703 FBXO32Q969P5 355 aa6.61□□□□□ -1.35
HDAC6-210ENST00000441703 MYLPFQ96A32 169 aa6.61□□□□□ -1.35
HDAC6-210ENST00000441703 ATXN7L3BQ96GX2 97 aa6.61□□□□□ -1.35
HDAC6-210ENST00000441703 PSMB7Q99436 277 aa6.61□□□□□ -1.35
HDAC6-210ENST00000441703 NDNQ99608 321 aa6.61□□□□□ -1.35
HDAC6-210ENST00000441703 PRMT1Q99873 361 aaKnown RBP6.61□□□□□ -1.35
HDAC6-210ENST00000441703 SELENOSQ9BQE4 189 aa6.61□□□□□ -1.35
HDAC6-210ENST00000441703 CIPCQ9C0C6 399 aa6.61□□□□□ -1.35
HDAC6-210ENST00000441703 IQCGQ9H095 443 aaKnown RBP6.61□□□□□ -1.35
HDAC6-210ENST00000441703 EPB41L4BQ9H329 900 aa6.61□□□□□ -1.35
HDAC6-210ENST00000441703 MMADHCQ9H3L0 296 aaPredicted RBP6.61□□□□□ -1.35
HDAC6-210ENST00000441703 DCLRE1BQ9H816 532 aa6.61□□□□□ -1.35
HDAC6-210ENST00000441703 ERVMER34-1Q9H9K5 563 aa6.61□□□□□ -1.35
HDAC6-210ENST00000441703 GDAP2Q9NXN4 497 aa6.61□□□□□ -1.35
HDAC6-210ENST00000441703 MARK1Q9P0L2 795 aa6.61□□□□□ -1.35
HDAC6-210ENST00000441703 SEPT10Q9P0V9 454 aa6.61□□□□□ -1.35
HDAC6-210ENST00000441703 STOML1Q9UBI4 398 aa6.61□□□□□ -1.35
HDAC6-210ENST00000441703 NKX1-2Q9UD57 310 aaPredicted RBP6.61□□□□□ -1.35
HDAC6-210ENST00000441703 INTUQ9ULD6 942 aa6.61□□□□□ -1.35
HDAC6-210ENST00000441703 ZNF510Q9Y2H8 683 aa6.61□□□□□ -1.35
HDAC6-210ENST00000441703 COMMD3-BMI1R4GMX3 469 aa6.61□□□□□ -1.35
HDAC6-210ENST00000441703 PLXNA2O75051 1894 aa6.61□□□□□ -1.35
HDAC6-210ENST00000441703 A0A1B0GVM2 712 aa6.6□□□□□ -1.35
HDAC6-210ENST00000441703 LRRC72A6NJI9 287 aa6.6□□□□□ -1.35
HDAC6-210ENST00000441703 LRRC53A6NM62 1247 aa6.6□□□□□ -1.35
HDAC6-210ENST00000441703 SIGLEC16A6NMB1 481 aa6.6□□□□□ -1.35
HDAC6-210ENST00000441703 A8MUI8 341 aa6.6□□□□□ -1.35
HDAC6-210ENST00000441703 TLR4O00206 839 aa6.6□□□□□ -1.35
HDAC6-210ENST00000441703 TRIM38O00635 465 aa6.6□□□□□ -1.35
HDAC6-210ENST00000441703 NVLO15381 856 aaKnown RBP6.6□□□□□ -1.35
HDAC6-210ENST00000441703 DAPK3O43293 454 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms