RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 MEIS2O14770 477 aa3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 NCAM2O15394 837 aa3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 PLA2G6O60733 806 aa3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 TJP3O95049 919 aa3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 GNA14O95837 355 aa3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 NDUFB10O96000 172 aa3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 GH2P01242 217 aa3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 CYP3A4P08684 503 aa3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 IL6RP08887 468 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 CHRM5P08912 532 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 PLA2G4BP0C869 781 aa3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 PRR35P0CG20 571 aa3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 BRAFP15056 766 aa3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 H2AFXP16104 143 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 CTGFP29279 349 aa3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 CIITAP33076 1130 aa3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 MAN1A1P33908 653 aa3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 CYLC1P35663 651 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 ARHGAP25P42331 645 aa3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 SUMO3P55854 103 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 GEMIN4P57678 1058 aaKnown RBP3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 KRTAP10-11P60412 298 aa3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 CBX1P83916 185 aa3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 ZBED6P86452 979 aa3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 IKQ13123 557 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 PPFIA1Q13136 1202 aa3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 STARD3Q14849 445 aa3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 DLGAP5Q15398 846 aa3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 Q4G0T1 1027 aa3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 ZNF569Q5MCW4 686 aa3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 PRAMEF17Q5VTA0 474 aa3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 HAUS3Q68CZ6 603 aa3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 RGS7BPQ6MZT1 257 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 ZNF783Q6ZMS7 281 aa3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 TRIM72Q6ZMU5 477 aa3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 RSRC2Q7L4I2 434 aaKnown RBP3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 SYTL1Q8IYJ3 562 aa3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 MYOCDQ8IZQ8 938 aa3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 SLC35F6Q8N357 371 aa3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 CCDC33Q8N5R6 958 aa3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 CEP112Q8N8E3 955 aa3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 ZNF527Q8NB42 609 aa3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 KIAA0895Q8NCT3 520 aa3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 OSCP1Q8WVF1 389 aa3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 KBTBD7Q8WVZ9 684 aa3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 FAM151AQ8WW52 585 aa3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 MAML1Q92585 1016 aa3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 DPF1Q92782 380 aa3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 TBC1D20Q96BZ9 403 aa3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 DNAJC19Q96DA6 116 aa3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 FAM20AQ96MK3 541 aa3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 ERGIC2Q96RQ1 377 aa3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 CHP1Q99653 195 aa3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 SLF1Q9BQI6 1058 aa3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 DPCDQ9BVM2 203 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 FSD1LQ9BXM9 530 aa3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 TRIM54Q9BYV2 358 aa3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 DPH1Q9BZG8 443 aa3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 EDEM3Q9BZQ6 932 aa3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 VPS33BQ9H267 617 aa3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 NDST4Q9H3R1 872 aa3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 KCNMB3Q9NPA1 279 aa3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 DUSP22Q9NRW4 184 aa3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 ARGLU1Q9NWB6 273 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 RRN3Q9NYV6 651 aa3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 COL20A1Q9P218 1284 aa3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 DKK3Q9UBP4 350 aa3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 GRHPRQ9UBQ7 328 aa3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 HDAC9Q9UKV0 1011 aa3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 AGAP1Q9UPQ3 857 aa3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 SCINQ9Y6U3 715 aa3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 COL2A1P02458 1487 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P11-201ENST00000440127 MYH6P13533 1939 aa3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 A0A1W2PRG0 241 aa3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 WDR91A4D1P6 747 aa3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 YDJCA8MPS7 323 aa3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 EIF3CLB5ME19 914 aaKnown RBP3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 TCP10L2B9ZVM9 353 aa3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 PROB1E7EW31 1015 aa3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 FFAR2O15552 330 aa3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 ATP8B1O43520 1251 aa3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 KRT86O43790 486 aa3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 MED24O75448 989 aa3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 RNF8O76064 485 aa3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 IPO7O95373 1038 aaKnown RBP3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 POLR2MP0CAP2 368 aa3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 ITGB6P18564 788 aa3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 CYP11B2P19099 503 aa3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 TRIM21P19474 475 aaKnown RBP3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 PCSK6P29122 969 aa3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 LIPAP38571 399 aa3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 MMP13P45452 471 aa3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 MAPK9P45984 424 aa3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 KLK7P49862 253 aa3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 CLCN2P51788 898 aa3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 ZNF134P52741 427 aa3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 LILRA4P59901 499 aa3.66□□□□□ -1.82
HMGB3P11-201ENST00000440127 SNAP25P60880 206 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms