RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 ANXA9O76027 345 aa14.34□□□□□ -0.11
LIMD1-202ENST00000440097 CNTN5O94779 1100 aa14.34□□□□□ -0.11
LIMD1-202ENST00000440097 HAPLN1P10915 354 aaPredicted RBP14.34□□□□□ -0.11
LIMD1-202ENST00000440097 IKBKEQ14164 716 aa14.34□□□□□ -0.11
LIMD1-202ENST00000440097 TAF12Q16514 161 aa14.34□□□□□ -0.11
LIMD1-202ENST00000440097 ALFQ53S48 1182 aa14.34□□□□□ -0.11
LIMD1-202ENST00000440097 KCTD11Q693B1 232 aa14.34□□□□□ -0.11
LIMD1-202ENST00000440097 TMCO2Q7Z6W1 182 aaPredicted RBP14.34□□□□□ -0.11
LIMD1-202ENST00000440097 LINC00523Q86TU6 105 aa14.34□□□□□ -0.11
LIMD1-202ENST00000440097 SHKBP1Q8TBC3 707 aa14.34□□□□□ -0.11
LIMD1-202ENST00000440097 ATP2A3Q93084 1043 aa14.34□□□□□ -0.11
LIMD1-202ENST00000440097 SLC39A13Q96H72 371 aa14.34□□□□□ -0.11
LIMD1-202ENST00000440097 TMEM175Q9BSA9 504 aa14.34□□□□□ -0.11
LIMD1-202ENST00000440097 IL22Q9GZX6 179 aa14.34□□□□□ -0.11
LIMD1-202ENST00000440097 CASS4Q9NQ75 786 aa14.34□□□□□ -0.11
LIMD1-202ENST00000440097 TPP1O14773 563 aa14.33□□□□□ -0.12
LIMD1-202ENST00000440097 CNTFP26441 200 aa14.33□□□□□ -0.12
LIMD1-202ENST00000440097 HOXC13P31276 330 aa14.33□□□□□ -0.12
LIMD1-202ENST00000440097 ABCG1P45844 678 aa14.33□□□□□ -0.12
LIMD1-202ENST00000440097 NIPAL4Q0D2K0 466 aa14.33□□□□□ -0.12
LIMD1-202ENST00000440097 USP41Q3LFD5 358 aa14.33□□□□□ -0.12
LIMD1-202ENST00000440097 SLC39A5Q6ZMH5 540 aa14.33□□□□□ -0.12
LIMD1-202ENST00000440097 TRIM74Q86UV6 250 aa14.33□□□□□ -0.12
LIMD1-202ENST00000440097 TRIM73Q86UV7 250 aa14.33□□□□□ -0.12
LIMD1-202ENST00000440097 OR6Y1Q8NGX8 325 aa14.33□□□□□ -0.12
LIMD1-202ENST00000440097 C1orf74Q96LT6 269 aa14.33□□□□□ -0.12
LIMD1-202ENST00000440097 TSGA13Q96PP4 275 aa14.33□□□□□ -0.12
LIMD1-202ENST00000440097 AGAP2Q99490 1192 aa14.33□□□□□ -0.12
LIMD1-202ENST00000440097 FICDQ9BVA6 458 aa14.33□□□□□ -0.12
LIMD1-202ENST00000440097 SP110Q9HB58 689 aa14.33□□□□□ -0.12
LIMD1-202ENST00000440097 GLOD4Q9HC38 313 aa14.33□□□□□ -0.12
LIMD1-202ENST00000440097 OGDHLQ9ULD0 1010 aa14.33□□□□□ -0.12
LIMD1-202ENST00000440097 PLLPQ9Y342 182 aa14.33□□□□□ -0.12
LIMD1-202ENST00000440097 PRUNE2Q8WUY3 3088 aa14.33□□□□□ -0.12
LIMD1-202ENST00000440097 PENKP01210 267 aaPredicted RBP14.33□□□□□ -0.12
LIMD1-202ENST00000440097 HLA-DQB2P05538 268 aa14.33□□□□□ -0.12
LIMD1-202ENST00000440097 ITGA2BP08514 1039 aa14.33□□□□□ -0.12
LIMD1-202ENST00000440097 PABPC4LP0CB38 370 aaKnown RBP14.33□□□□□ -0.12
LIMD1-202ENST00000440097 TYK2P29597 1187 aa14.33□□□□□ -0.12
LIMD1-202ENST00000440097 ZNF33AQ06730 810 aa14.33□□□□□ -0.12
LIMD1-202ENST00000440097 MYBPC3Q14896 1274 aa14.33□□□□□ -0.12
LIMD1-202ENST00000440097 TRIP4Q15650 581 aaPredicted RBP14.33□□□□□ -0.12
LIMD1-202ENST00000440097 ANO4Q32M45 955 aa14.33□□□□□ -0.12
LIMD1-202ENST00000440097 ANKRD20A4Q4UJ75 823 aa14.33□□□□□ -0.12
LIMD1-202ENST00000440097 CYS1Q717R9 158 aa14.33□□□□□ -0.12
LIMD1-202ENST00000440097 STRA8Q7Z7C7 330 aa14.33□□□□□ -0.12
LIMD1-202ENST00000440097 LCA5Q86VQ0 697 aa14.33□□□□□ -0.12
LIMD1-202ENST00000440097 SPATA24Q86W54 205 aa14.33□□□□□ -0.12
LIMD1-202ENST00000440097 PDSS2Q86YH6 399 aa14.33□□□□□ -0.12
LIMD1-202ENST00000440097 HMCESQ96FZ2 354 aa14.33□□□□□ -0.12
LIMD1-202ENST00000440097 ZNF419Q96HQ0 510 aaPredicted RBP14.33□□□□□ -0.12
LIMD1-202ENST00000440097 TBL1YQ9BQ87 522 aa14.33□□□□□ -0.12
LIMD1-202ENST00000440097 GPAMQ9HCL2 828 aa14.33□□□□□ -0.12
LIMD1-202ENST00000440097 TAGLN3Q9UI15 199 aa14.33□□□□□ -0.12
LIMD1-202ENST00000440097 SLC38A8A6NNN8 435 aa14.32□□□□□ -0.12
LIMD1-202ENST00000440097 VNN2O95498 520 aa14.32□□□□□ -0.12
LIMD1-202ENST00000440097 GMPRP36959 345 aa14.32□□□□□ -0.12
LIMD1-202ENST00000440097 NPY2RP49146 381 aa14.32□□□□□ -0.12
LIMD1-202ENST00000440097 INHBCP55103 352 aa14.32□□□□□ -0.12
LIMD1-202ENST00000440097 MAXP61244 160 aa14.32□□□□□ -0.12
LIMD1-202ENST00000440097 TMPRSS15P98073 1019 aa14.32□□□□□ -0.12
LIMD1-202ENST00000440097 SMARCB1Q12824 385 aa14.32□□□□□ -0.12
LIMD1-202ENST00000440097 HNRNPDQ14103 355 aaKnown RBP14.32□□□□□ -0.12
LIMD1-202ENST00000440097 SFT2D3Q587I9 215 aa14.32□□□□□ -0.12
LIMD1-202ENST00000440097 TMCO4Q5TGY1 634 aa14.32□□□□□ -0.12
LIMD1-202ENST00000440097 FBXL22Q6P050 247 aa14.32□□□□□ -0.12
LIMD1-202ENST00000440097 KLHL23Q8NBE8 558 aa14.32□□□□□ -0.12
LIMD1-202ENST00000440097 TTC16Q8NEE8 873 aa14.32□□□□□ -0.12
LIMD1-202ENST00000440097 PPP1R14CQ8TAE6 165 aa14.32□□□□□ -0.12
LIMD1-202ENST00000440097 KLHL5Q96PQ7 755 aa14.32□□□□□ -0.12
LIMD1-202ENST00000440097 NT5MQ9NPB1 228 aa14.32□□□□□ -0.12
LIMD1-202ENST00000440097 SAGE1Q9NXZ1 904 aa14.32□□□□□ -0.12
LIMD1-202ENST00000440097 GALNT8Q9NY28 637 aa14.32□□□□□ -0.12
LIMD1-202ENST00000440097 KCNK4Q9NYG8 393 aa14.32□□□□□ -0.12
LIMD1-202ENST00000440097 TMCO1Q9UM00 188 aa14.32□□□□□ -0.12
LIMD1-202ENST00000440097 MEI4A8MW99 385 aa14.32□□□□□ -0.12
LIMD1-202ENST00000440097 ATF6P18850 670 aa14.32□□□□□ -0.12
LIMD1-202ENST00000440097 SAT1P21673 171 aa14.32□□□□□ -0.12
LIMD1-202ENST00000440097 OR1E1P30953 314 aa14.32□□□□□ -0.12
LIMD1-202ENST00000440097 CA8P35219 290 aa14.32□□□□□ -0.12
LIMD1-202ENST00000440097 ETFBP38117 255 aa14.32□□□□□ -0.12
LIMD1-202ENST00000440097 GP5P40197 560 aa14.32□□□□□ -0.12
LIMD1-202ENST00000440097 SCNN1BP51168 640 aa14.32□□□□□ -0.12
LIMD1-202ENST00000440097 DNAL1Q4LDG9 190 aa14.32□□□□□ -0.12
LIMD1-202ENST00000440097 SATL1Q86VE3 508 aa14.32□□□□□ -0.12
LIMD1-202ENST00000440097 KCNMB4Q86W47 210 aa14.32□□□□□ -0.12
LIMD1-202ENST00000440097 NUDCD3Q8IVD9 361 aa14.32□□□□□ -0.12
LIMD1-202ENST00000440097 ARID3BQ8IVW6 561 aaPredicted RBP14.32□□□□□ -0.12
LIMD1-202ENST00000440097 ZSCAN18Q8TBC5 510 aaPredicted RBP14.32□□□□□ -0.12
LIMD1-202ENST00000440097 PYDC1Q8WXC3 89 aa14.32□□□□□ -0.12
LIMD1-202ENST00000440097 NMD3Q96D46 503 aaKnown RBP14.32□□□□□ -0.12
LIMD1-202ENST00000440097 HIC2Q96JB3 615 aa14.32□□□□□ -0.12
LIMD1-202ENST00000440097 ZNF778Q96MU6 729 aa14.32□□□□□ -0.12
LIMD1-202ENST00000440097 ZNF395Q9H8N7 513 aaPredicted RBP14.32□□□□□ -0.12
LIMD1-202ENST00000440097 TMEM39AQ9NV64 488 aa14.32□□□□□ -0.12
LIMD1-202ENST00000440097 J3KR12 359 aa14.31□□□□□ -0.12
LIMD1-202ENST00000440097 PSMD3O43242 534 aa14.31□□□□□ -0.12
LIMD1-202ENST00000440097 OR6B1O95007 311 aa14.31□□□□□ -0.12
LIMD1-202ENST00000440097 IL1BP01584 269 aa14.31□□□□□ -0.12
LIMD1-202ENST00000440097 ALDOAP04075 364 aaKnown RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms