RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 RHOAP61586 193 aa17.95■□□□□ 0.46
CCDC188-201ENST00000439765 CNTN1Q12860 1018 aa17.95■□□□□ 0.46
CCDC188-201ENST00000439765 PDK2Q15119 407 aa17.95■□□□□ 0.46
CCDC188-201ENST00000439765 CARD16Q5EG05 197 aa17.95■□□□□ 0.46
CCDC188-201ENST00000439765 ARSIQ5FYB1 569 aa17.95■□□□□ 0.46
CCDC188-201ENST00000439765 LRRC38Q5VT99 294 aa17.95■□□□□ 0.46
CCDC188-201ENST00000439765 DCAF12L1Q5VU92 463 aa17.95■□□□□ 0.46
CCDC188-201ENST00000439765 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.95■□□□□ 0.46
CCDC188-201ENST00000439765 LZTR1Q8N653 840 aa17.95■□□□□ 0.46
CCDC188-201ENST00000439765 RAPGEF5Q92565 580 aa17.95■□□□□ 0.46
CCDC188-201ENST00000439765 FOXJ1Q92949 421 aa17.95■□□□□ 0.46
CCDC188-201ENST00000439765 ISG20Q96AZ6 181 aaKnown RBP17.95■□□□□ 0.46
CCDC188-201ENST00000439765 HES6Q96HZ4 224 aa17.95■□□□□ 0.46
CCDC188-201ENST00000439765 SGK2Q9HBY8 427 aa17.95■□□□□ 0.46
CCDC188-201ENST00000439765 PACSIN2Q9UNF0 486 aaPredicted RBP17.95■□□□□ 0.46
CCDC188-201ENST00000439765 WASF2Q9Y6W5 498 aa17.95■□□□□ 0.46
CCDC188-201ENST00000439765 MIF4GDA9UHW6 222 aaKnown RBP17.95■□□□□ 0.46
CCDC188-201ENST00000439765 KRIT1O00522 736 aa17.95■□□□□ 0.46
CCDC188-201ENST00000439765 MAP3K6O95382 1288 aa17.95■□□□□ 0.46
CCDC188-201ENST00000439765 CFIP05156 583 aa17.95■□□□□ 0.46
CCDC188-201ENST00000439765 CEACAM1P13688 526 aa17.95■□□□□ 0.46
CCDC188-201ENST00000439765 CTNNA2P26232 953 aa17.95■□□□□ 0.46
CCDC188-201ENST00000439765 GKP32189 559 aa17.95■□□□□ 0.46
CCDC188-201ENST00000439765 SNRPD1P62314 119 aaKnown RBP17.95■□□□□ 0.46
CCDC188-201ENST00000439765 SFSWAPQ12872 951 aaKnown RBP17.95■□□□□ 0.46
CCDC188-201ENST00000439765 ANKRD20A8PQ5CZ79 823 aa17.95■□□□□ 0.46
CCDC188-201ENST00000439765 NCBP2-AS2Q69YL0 99 aa17.95■□□□□ 0.46
CCDC188-201ENST00000439765 SYT10Q6XYQ8 523 aa17.95■□□□□ 0.46
CCDC188-201ENST00000439765 MAP7D3Q8IWC1 876 aa17.95■□□□□ 0.46
CCDC188-201ENST00000439765 RHOT1Q8IXI2 618 aa17.95■□□□□ 0.46
CCDC188-201ENST00000439765 CADM4Q8NFZ8 388 aa17.95■□□□□ 0.46
CCDC188-201ENST00000439765 OR2AP1Q8NGE2 309 aa17.95■□□□□ 0.46
CCDC188-201ENST00000439765 OR14C36Q8NHC7 312 aa17.95■□□□□ 0.46
CCDC188-201ENST00000439765 PCDH19Q8TAB3 1148 aa17.95■□□□□ 0.46
CCDC188-201ENST00000439765 GDAP1L1Q96MZ0 367 aa17.95■□□□□ 0.46
CCDC188-201ENST00000439765 TLR10Q9BXR5 811 aa17.95■□□□□ 0.46
CCDC188-201ENST00000439765 LHX3Q9UBR4 397 aa17.95■□□□□ 0.46
CCDC188-201ENST00000439765 ANGPTL2Q9UKU9 493 aa17.95■□□□□ 0.46
CCDC188-201ENST00000439765 PCDHA3Q9Y5H8 950 aa17.95■□□□□ 0.46
CCDC188-201ENST00000439765 CCDC66A2RUB6 948 aa17.94■□□□□ 0.46
CCDC188-201ENST00000439765 ENC1O14682 589 aa17.94■□□□□ 0.46
CCDC188-201ENST00000439765 PSTPIP1O43586 416 aa17.94■□□□□ 0.46
CCDC188-201ENST00000439765 IGSF6O95976 241 aa17.94■□□□□ 0.46
CCDC188-201ENST00000439765 GSRP00390 522 aa17.94■□□□□ 0.46
CCDC188-201ENST00000439765 KDELR1P24390 212 aa17.94■□□□□ 0.46
CCDC188-201ENST00000439765 CTNNA1P35221 906 aaKnown RBP17.94■□□□□ 0.46
CCDC188-201ENST00000439765 RPS6KA1Q15418 735 aa17.94■□□□□ 0.46
CCDC188-201ENST00000439765 INO80DQ53TQ3 878 aaPredicted RBP17.94■□□□□ 0.46
CCDC188-201ENST00000439765 SYCP2LQ5T4T6 812 aa17.94■□□□□ 0.46
CCDC188-201ENST00000439765 AGBL4Q5VU57 503 aa17.94■□□□□ 0.46
CCDC188-201ENST00000439765 NCEH1Q6PIU2 408 aa17.94■□□□□ 0.46
CCDC188-201ENST00000439765 ATPAF2Q8N5M1 289 aa17.94■□□□□ 0.46
CCDC188-201ENST00000439765 CASKIN2Q8WXE0 1202 aa17.94■□□□□ 0.46
CCDC188-201ENST00000439765 ARRDC3Q96B67 414 aa17.94■□□□□ 0.46
CCDC188-201ENST00000439765 HEPHQ9BQS7 1158 aa17.94■□□□□ 0.46
CCDC188-201ENST00000439765 MIR1-1HGQ9H1L0 117 aa17.94■□□□□ 0.46
CCDC188-201ENST00000439765 DYRK4Q9NR20 520 aa17.94■□□□□ 0.46
CCDC188-201ENST00000439765 SUSD2Q9UGT4 822 aa17.94■□□□□ 0.46
CCDC188-201ENST00000439765 IPO11Q9UI26 975 aaKnown RBP17.94■□□□□ 0.46
CCDC188-201ENST00000439765 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.94■□□□□ 0.46
CCDC188-201ENST00000439765 GIPC1O14908 333 aa17.93■□□□□ 0.46
CCDC188-201ENST00000439765 FANCGO15287 622 aa17.93■□□□□ 0.46
CCDC188-201ENST00000439765 DDX3YO15523 660 aaKnown RBP17.93■□□□□ 0.46
CCDC188-201ENST00000439765 FSBPO95073 299 aa17.93■□□□□ 0.46
CCDC188-201ENST00000439765 CASQ1P31415 396 aa17.93■□□□□ 0.46
CCDC188-201ENST00000439765 MAPK8P45983 427 aa17.93■□□□□ 0.46
CCDC188-201ENST00000439765 PEX5P50542 639 aa17.93■□□□□ 0.46
CCDC188-201ENST00000439765 UAP1L1Q3KQV9 507 aa17.93■□□□□ 0.46
CCDC188-201ENST00000439765 ODF2Q5BJF6 829 aa17.93■□□□□ 0.46
CCDC188-201ENST00000439765 WDR45BQ5MNZ6 344 aa17.93■□□□□ 0.46
CCDC188-201ENST00000439765 TMIEQ8NEW7 156 aa17.93■□□□□ 0.46
CCDC188-201ENST00000439765 DNASE2BQ8WZ79 361 aa17.93■□□□□ 0.46
CCDC188-201ENST00000439765 KRT35Q92764 455 aa17.93■□□□□ 0.46
CCDC188-201ENST00000439765 BIRC7Q96CA5 298 aa17.93■□□□□ 0.46
CCDC188-201ENST00000439765 FAF2Q96CS3 445 aa17.93■□□□□ 0.46
CCDC188-201ENST00000439765 PPP1R16AQ96I34 528 aa17.93■□□□□ 0.46
CCDC188-201ENST00000439765 NAPGQ99747 312 aaPredicted RBP17.93■□□□□ 0.46
CCDC188-201ENST00000439765 EIF2B4Q9UI10 523 aaKnown RBP17.93■□□□□ 0.46
CCDC188-201ENST00000439765 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.93■□□□□ 0.46
CCDC188-201ENST00000439765 IGF2RP11717 2491 aa17.92■□□□□ 0.46
CCDC188-201ENST00000439765 CTAGE9A4FU28 777 aa17.92■□□□□ 0.46
CCDC188-201ENST00000439765 LRRC72A6NJI9 287 aa17.92■□□□□ 0.46
CCDC188-201ENST00000439765 METTL12A8MUP2 240 aa17.92■□□□□ 0.46
CCDC188-201ENST00000439765 UPK3BL1B0FP48 263 aa17.92■□□□□ 0.46
CCDC188-201ENST00000439765 UPK3BL2E5RIL1 263 aa17.92■□□□□ 0.46
CCDC188-201ENST00000439765 ATP1A1P05023 1023 aaKnown RBP17.92■□□□□ 0.46
CCDC188-201ENST00000439765 UGT2B4P06133 528 aa17.92■□□□□ 0.46
CCDC188-201ENST00000439765 MARCKSL1P49006 195 aa17.92■□□□□ 0.46
CCDC188-201ENST00000439765 IL10RBQ08334 325 aa17.92■□□□□ 0.46
CCDC188-201ENST00000439765 CYTH1Q15438 398 aa17.92■□□□□ 0.46
CCDC188-201ENST00000439765 PIP5KL1Q5T9C9 394 aa17.92■□□□□ 0.46
CCDC188-201ENST00000439765 ZCCHC9Q8N567 271 aaKnown RBP17.92■□□□□ 0.46
CCDC188-201ENST00000439765 PQLC3Q8N755 202 aa17.92■□□□□ 0.46
CCDC188-201ENST00000439765 UBL4BQ8N7F7 174 aa17.92■□□□□ 0.46
CCDC188-201ENST00000439765 TSEN2Q8NCE0 465 aaKnown RBP17.92■□□□□ 0.46
CCDC188-201ENST00000439765 RNF25Q96BH1 459 aaPredicted RBP17.92■□□□□ 0.46
CCDC188-201ENST00000439765 CINPQ9BW66 212 aaPredicted RBP17.92■□□□□ 0.46
CCDC188-201ENST00000439765 PCED1AQ9H1Q7 454 aa17.92■□□□□ 0.46
CCDC188-201ENST00000439765 FSCN3Q9NQT6 498 aa17.92■□□□□ 0.46
CCDC188-201ENST00000439765 SLCO1B1Q9Y6L6 691 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms