RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 SEPT3Q9UH03 358 aa11.91□□□□□ -0.5
SMAD3-202ENST00000439724 AGO1Q9UL18 857 aaKnown RBP11.91□□□□□ -0.5
SMAD3-202ENST00000439724 SSX2IPQ9Y2D8 614 aa11.91□□□□□ -0.5
SMAD3-202ENST00000439724 TBC1D30Q9Y2I9 924 aa11.91□□□□□ -0.5
SMAD3-202ENST00000439724 DENND4CQ5VZ89 1909 aa11.9□□□□□ -0.5
SMAD3-202ENST00000439724 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.9□□□□□ -0.5
SMAD3-202ENST00000439724 CCDC195A0A1B0GUA6 201 aa11.9□□□□□ -0.5
SMAD3-202ENST00000439724 CFAP73A6NFT4 308 aa11.9□□□□□ -0.5
SMAD3-202ENST00000439724 MROH6A6NGR9 719 aa11.9□□□□□ -0.5
SMAD3-202ENST00000439724 GOLGA8TH3BQL2 631 aa11.9□□□□□ -0.5
SMAD3-202ENST00000439724 FGF1P05230 155 aa11.9□□□□□ -0.5
SMAD3-202ENST00000439724 C2P06681 752 aa11.9□□□□□ -0.5
SMAD3-202ENST00000439724 RHOCP08134 193 aa11.9□□□□□ -0.5
SMAD3-202ENST00000439724 DLDP09622 509 aaKnown RBP11.9□□□□□ -0.5
SMAD3-202ENST00000439724 ACRP10323 421 aa11.9□□□□□ -0.5
SMAD3-202ENST00000439724 CTSAP10619 480 aa11.9□□□□□ -0.5
SMAD3-202ENST00000439724 MBL2P11226 248 aaPredicted RBP11.9□□□□□ -0.5
SMAD3-202ENST00000439724 FGF3P11487 239 aaPredicted RBP11.9□□□□□ -0.5
SMAD3-202ENST00000439724 GABRB3P28472 473 aa11.9□□□□□ -0.5
SMAD3-202ENST00000439724 OXCT1P55809 520 aa11.9□□□□□ -0.5
SMAD3-202ENST00000439724 STX3Q13277 289 aa11.9□□□□□ -0.5
SMAD3-202ENST00000439724 ZNF177Q13360 481 aaPredicted RBP11.9□□□□□ -0.5
SMAD3-202ENST00000439724 THOC5Q13769 683 aaKnown RBP11.9□□□□□ -0.5
SMAD3-202ENST00000439724 PABPC1LQ4VXU2 614 aaKnown RBP11.9□□□□□ -0.5
SMAD3-202ENST00000439724 SIRPB2Q5JXA9 342 aa11.9□□□□□ -0.5
SMAD3-202ENST00000439724 ZNF783Q6ZMS7 281 aa11.9□□□□□ -0.5
SMAD3-202ENST00000439724 KDELC2Q7Z4H8 507 aa11.9□□□□□ -0.5
SMAD3-202ENST00000439724 NECAB2Q7Z6G3 386 aa11.9□□□□□ -0.5
SMAD3-202ENST00000439724 GALNT7Q86SF2 657 aa11.9□□□□□ -0.5
SMAD3-202ENST00000439724 GABPB2Q8TAK5 448 aaPredicted RBP11.9□□□□□ -0.5
SMAD3-202ENST00000439724 CALML6Q8TD86 181 aa11.9□□□□□ -0.5
SMAD3-202ENST00000439724 PEX13Q92968 403 aa11.9□□□□□ -0.5
SMAD3-202ENST00000439724 WBP2Q969T9 261 aa11.9□□□□□ -0.5
SMAD3-202ENST00000439724 ERP27Q96DN0 273 aa11.9□□□□□ -0.5
SMAD3-202ENST00000439724 ZFRQ96KR1 1074 aaKnown RBP11.9□□□□□ -0.5
SMAD3-202ENST00000439724 PSKH2Q96QS6 385 aa11.9□□□□□ -0.5
SMAD3-202ENST00000439724 ACE2Q9BYF1 805 aaPredicted RBP11.9□□□□□ -0.5
SMAD3-202ENST00000439724 ECT2Q9H8V3 914 aa11.9□□□□□ -0.5
SMAD3-202ENST00000439724 KCNK13Q9HB14 408 aa11.9□□□□□ -0.5
SMAD3-202ENST00000439724 IL21Q9HBE4 155 aa11.9□□□□□ -0.5
SMAD3-202ENST00000439724 ZNF334Q9HCZ1 680 aaPredicted RBP11.9□□□□□ -0.5
SMAD3-202ENST00000439724 IL23AQ9NPF7 189 aa11.9□□□□□ -0.5
SMAD3-202ENST00000439724 THAP1Q9NVV9 213 aa11.9□□□□□ -0.5
SMAD3-202ENST00000439724 COPG2Q9UBF2 871 aa11.9□□□□□ -0.5
SMAD3-202ENST00000439724 UBA2Q9UBT2 640 aaPredicted RBP11.9□□□□□ -0.5
SMAD3-202ENST00000439724 MID2Q9UJV3 735 aa11.9□□□□□ -0.5
SMAD3-202ENST00000439724 ASB3Q9Y575 518 aa11.9□□□□□ -0.5
SMAD3-202ENST00000439724 PCDHB12Q9Y5F1 795 aa11.9□□□□□ -0.5
SMAD3-202ENST00000439724 SLC7A4O43246 635 aa11.89□□□□□ -0.51
SMAD3-202ENST00000439724 FGF18O76093 207 aa11.89□□□□□ -0.51
SMAD3-202ENST00000439724 AHSGP02765 367 aa11.89□□□□□ -0.51
SMAD3-202ENST00000439724 SERPINE1P05121 402 aa11.89□□□□□ -0.51
SMAD3-202ENST00000439724 APOA4P06727 396 aa11.89□□□□□ -0.51
SMAD3-202ENST00000439724 F7P08709 466 aaPredicted RBP11.89□□□□□ -0.51
SMAD3-202ENST00000439724 LINC00271P0C7V0 271 aa11.89□□□□□ -0.51
SMAD3-202ENST00000439724 IRF1P10914 325 aa11.89□□□□□ -0.51
SMAD3-202ENST00000439724 COL6A2P12110 1019 aa11.89□□□□□ -0.51
SMAD3-202ENST00000439724 SLC1A2P43004 574 aa11.89□□□□□ -0.51
SMAD3-202ENST00000439724 ABCG1P45844 678 aa11.89□□□□□ -0.51
SMAD3-202ENST00000439724 SGSHP51688 502 aa11.89□□□□□ -0.51
SMAD3-202ENST00000439724 ARFIP2P53365 341 aa11.89□□□□□ -0.51
SMAD3-202ENST00000439724 IRX4P78413 519 aa11.89□□□□□ -0.51
SMAD3-202ENST00000439724 HTRA4P83105 476 aaPredicted RBP11.89□□□□□ -0.51
SMAD3-202ENST00000439724 MPP1Q00013 466 aa11.89□□□□□ -0.51
SMAD3-202ENST00000439724 LAMB3Q13751 1172 aa11.89□□□□□ -0.51
SMAD3-202ENST00000439724 IL31Q6EBC2 164 aa11.89□□□□□ -0.51
SMAD3-202ENST00000439724 NEPROQ6NW34 567 aa11.89□□□□□ -0.51
SMAD3-202ENST00000439724 CCDC91Q7Z6B0 441 aa11.89□□□□□ -0.51
SMAD3-202ENST00000439724 CRLF3Q8IUI8 442 aa11.89□□□□□ -0.51
SMAD3-202ENST00000439724 DENND6AQ8IWF6 608 aa11.89□□□□□ -0.51
SMAD3-202ENST00000439724 LMNTD2Q8IXW0 634 aa11.89□□□□□ -0.51
SMAD3-202ENST00000439724 PLD6Q8N2A8 252 aaKnown RBP11.89□□□□□ -0.51
SMAD3-202ENST00000439724 ACVR1CQ8NER5 493 aa11.89□□□□□ -0.51
SMAD3-202ENST00000439724 TMEM120AQ9BXJ8 343 aa11.89□□□□□ -0.51
SMAD3-202ENST00000439724 CAB39LQ9H9S4 337 aa11.89□□□□□ -0.51
SMAD3-202ENST00000439724 TXLNGQ9NUQ3 528 aa11.89□□□□□ -0.51
SMAD3-202ENST00000439724 KCNK4Q9NYG8 393 aa11.89□□□□□ -0.51
SMAD3-202ENST00000439724 DCTN4Q9UJW0 460 aa11.89□□□□□ -0.51
SMAD3-202ENST00000439724 FBXO5Q9UKT4 447 aa11.89□□□□□ -0.51
SMAD3-202ENST00000439724 SLC39A10Q9ULF5 831 aa11.89□□□□□ -0.51
SMAD3-202ENST00000439724 RIMKLBQ9ULI2 386 aa11.89□□□□□ -0.51
SMAD3-202ENST00000439724 A0A0G2JND7 137 aa11.88□□□□□ -0.51
SMAD3-202ENST00000439724 FAM95CA0A1B0GW59 222 aa11.88□□□□□ -0.51
SMAD3-202ENST00000439724 GFRA2O00451 464 aa11.88□□□□□ -0.51
SMAD3-202ENST00000439724 DNAJC6O75061 913 aa11.88□□□□□ -0.51
SMAD3-202ENST00000439724 ATP5HO75947 161 aa11.88□□□□□ -0.51
SMAD3-202ENST00000439724 UNC5CO95185 931 aa11.88□□□□□ -0.51
SMAD3-202ENST00000439724 SERPINF2P08697 491 aa11.88□□□□□ -0.51
SMAD3-202ENST00000439724 CPA3P15088 417 aa11.88□□□□□ -0.51
SMAD3-202ENST00000439724 CR2P20023 1033 aa11.88□□□□□ -0.51
SMAD3-202ENST00000439724 GRK2P25098 689 aa11.88□□□□□ -0.51
SMAD3-202ENST00000439724 CD151P48509 253 aa11.88□□□□□ -0.51
SMAD3-202ENST00000439724 SMAD3P84022 425 aaKnown RBP11.88□□□□□ -0.51
SMAD3-202ENST00000439724 IRF9Q00978 393 aa11.88□□□□□ -0.51
SMAD3-202ENST00000439724 ACVR1Q04771 509 aa11.88□□□□□ -0.51
SMAD3-202ENST00000439724 ILF2Q12905 390 aaKnown RBP11.88□□□□□ -0.51
SMAD3-202ENST00000439724 CTBP1Q13363 440 aa11.88□□□□□ -0.51
SMAD3-202ENST00000439724 USP10Q14694 798 aaKnown RBP11.88□□□□□ -0.51
SMAD3-202ENST00000439724 DLG2Q15700 870 aa11.88□□□□□ -0.51
SMAD3-202ENST00000439724 TAF1BQ53T94 588 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms