RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 MATN3O15232 486 aa11.97□□□□□ -0.49
HSPG2-206ENST00000439717 AP1G1O43747 822 aa11.97□□□□□ -0.49
HSPG2-206ENST00000439717 UGT2B4P06133 528 aa11.97□□□□□ -0.49
HSPG2-206ENST00000439717 TBC1D3HP0C7X1 549 aa11.97□□□□□ -0.49
HSPG2-206ENST00000439717 ADRB3P13945 408 aa11.97□□□□□ -0.49
HSPG2-206ENST00000439717 GNSP15586 552 aa11.97□□□□□ -0.49
HSPG2-206ENST00000439717 TGM2P21980 687 aa11.97□□□□□ -0.49
HSPG2-206ENST00000439717 GKP32189 559 aa11.97□□□□□ -0.49
HSPG2-206ENST00000439717 NUDT1P36639 197 aa11.97□□□□□ -0.49
HSPG2-206ENST00000439717 MMP13P45452 471 aa11.97□□□□□ -0.49
HSPG2-206ENST00000439717 MARCKSL1P49006 195 aa11.97□□□□□ -0.49
HSPG2-206ENST00000439717 RWDD2BP57060 319 aa11.97□□□□□ -0.49
HSPG2-206ENST00000439717 AP1S1P61966 158 aa11.97□□□□□ -0.49
HSPG2-206ENST00000439717 SLC10A2Q12908 348 aaPredicted RBP11.97□□□□□ -0.49
HSPG2-206ENST00000439717 ZNF235Q14590 738 aa11.97□□□□□ -0.49
HSPG2-206ENST00000439717 PDK1Q15118 436 aa11.97□□□□□ -0.49
HSPG2-206ENST00000439717 DUOXA1Q1HG43 343 aa11.97□□□□□ -0.49
HSPG2-206ENST00000439717 TBC1D3GQ6DHY5 549 aa11.97□□□□□ -0.49
HSPG2-206ENST00000439717 TBC1D3CQ6IPX1 549 aa11.97□□□□□ -0.49
HSPG2-206ENST00000439717 FBXL19Q6PCT2 694 aa11.97□□□□□ -0.49
HSPG2-206ENST00000439717 SLC23A3Q6PIS1 610 aa11.97□□□□□ -0.49
HSPG2-206ENST00000439717 PRR23CQ6ZRP0 262 aa11.97□□□□□ -0.49
HSPG2-206ENST00000439717 PEX26Q7Z412 305 aa11.97□□□□□ -0.49
HSPG2-206ENST00000439717 SRLQ86TD4 932 aa11.97□□□□□ -0.49
HSPG2-206ENST00000439717 ZSCAN30Q86W11 494 aa11.97□□□□□ -0.49
HSPG2-206ENST00000439717 TBC1D3Q8IZP1 549 aaPredicted RBP11.97□□□□□ -0.49
HSPG2-206ENST00000439717 ABCA7Q8IZY2 2146 aa11.97□□□□□ -0.49
HSPG2-206ENST00000439717 TEX26Q8N6G2 289 aa11.97□□□□□ -0.49
HSPG2-206ENST00000439717 C12orf50Q8NA57 414 aaPredicted RBP11.97□□□□□ -0.49
HSPG2-206ENST00000439717 MAML1Q92585 1016 aa11.97□□□□□ -0.49
HSPG2-206ENST00000439717 RAB7BQ96AH8 199 aa11.97□□□□□ -0.49
HSPG2-206ENST00000439717 BIRC7Q96CA5 298 aa11.97□□□□□ -0.49
HSPG2-206ENST00000439717 EXOC2Q96KP1 924 aa11.97□□□□□ -0.49
HSPG2-206ENST00000439717 ZNF641Q96N77 438 aaPredicted RBP11.97□□□□□ -0.49
HSPG2-206ENST00000439717 KLHL32Q96NJ5 620 aa11.97□□□□□ -0.49
HSPG2-206ENST00000439717 TMEM74BQ9NUR3 256 aa11.97□□□□□ -0.49
HSPG2-206ENST00000439717 DKK3Q9UBP4 350 aa11.97□□□□□ -0.49
HSPG2-206ENST00000439717 AMACRQ9UHK6 382 aa11.97□□□□□ -0.49
HSPG2-206ENST00000439717 EFR3BQ9Y2G0 817 aa11.97□□□□□ -0.49
HSPG2-206ENST00000439717 HEY1Q9Y5J3 304 aa11.97□□□□□ -0.49
HSPG2-206ENST00000439717 NUP205Q92621 2012 aa11.97□□□□□ -0.49
HSPG2-206ENST00000439717 TNRC6BQ9UPQ9 1833 aaKnown RBP11.97□□□□□ -0.49
HSPG2-206ENST00000439717 OTOGLQ3ZCN5 2332 aa11.96□□□□□ -0.49
HSPG2-206ENST00000439717 hCG_1818297A0A087WSY0 165 aa11.96□□□□□ -0.49
HSPG2-206ENST00000439717 A0A1B0GTW7 788 aa11.96□□□□□ -0.49
HSPG2-206ENST00000439717 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.96□□□□□ -0.49
HSPG2-206ENST00000439717 C16orf96A6NNT2 1141 aa11.96□□□□□ -0.49
HSPG2-206ENST00000439717 RNF103O00237 685 aa11.96□□□□□ -0.49
HSPG2-206ENST00000439717 PLK4O00444 970 aa11.96□□□□□ -0.49
HSPG2-206ENST00000439717 PPP1R12AO14974 1030 aaPredicted RBP11.96□□□□□ -0.49
HSPG2-206ENST00000439717 INSIG1O15503 277 aa11.96□□□□□ -0.49
HSPG2-206ENST00000439717 CST8O60676 142 aa11.96□□□□□ -0.49
HSPG2-206ENST00000439717 FSBPO95073 299 aa11.96□□□□□ -0.49
HSPG2-206ENST00000439717 IGHV4-34P06331 123 aa11.96□□□□□ -0.49
HSPG2-206ENST00000439717 KRT10P13645 584 aa11.96□□□□□ -0.49
HSPG2-206ENST00000439717 CD27P26842 260 aa11.96□□□□□ -0.49
HSPG2-206ENST00000439717 SERPINA4P29622 427 aa11.96□□□□□ -0.49
HSPG2-206ENST00000439717 PTPN7P35236 360 aa11.96□□□□□ -0.49
HSPG2-206ENST00000439717 CETN2P41208 172 aa11.96□□□□□ -0.49
HSPG2-206ENST00000439717 RGRP47804 291 aa11.96□□□□□ -0.49
HSPG2-206ENST00000439717 PEX5P50542 639 aa11.96□□□□□ -0.49
HSPG2-206ENST00000439717 SCNN1BP51168 640 aa11.96□□□□□ -0.49
HSPG2-206ENST00000439717 SUOXP51687 545 aa11.96□□□□□ -0.49
HSPG2-206ENST00000439717 TAS2R38P59533 333 aa11.96□□□□□ -0.49
HSPG2-206ENST00000439717 LMNB2Q03252 620 aa11.96□□□□□ -0.49
HSPG2-206ENST00000439717 PPIDQ08752 370 aaKnown RBP11.96□□□□□ -0.49
HSPG2-206ENST00000439717 CCDC6Q16204 474 aa11.96□□□□□ -0.49
HSPG2-206ENST00000439717 PARS2Q7L3T8 475 aaKnown RBP11.96□□□□□ -0.49
HSPG2-206ENST00000439717 TRIM69Q86WT6 500 aa11.96□□□□□ -0.49
HSPG2-206ENST00000439717 CCDC50Q8IVM0 306 aa11.96□□□□□ -0.49
HSPG2-206ENST00000439717 CCDC13Q8IYE1 715 aa11.96□□□□□ -0.49
HSPG2-206ENST00000439717 UBL4BQ8N7F7 174 aa11.96□□□□□ -0.49
HSPG2-206ENST00000439717 CCNYQ8ND76 341 aa11.96□□□□□ -0.49
HSPG2-206ENST00000439717 PDLIM2Q96JY6 352 aa11.96□□□□□ -0.49
HSPG2-206ENST00000439717 OLFM3Q96PB7 478 aa11.96□□□□□ -0.49
HSPG2-206ENST00000439717 NUDCD1Q96RS6 583 aa11.96□□□□□ -0.49
HSPG2-206ENST00000439717 MGME1Q9BQP7 344 aa11.96□□□□□ -0.49
HSPG2-206ENST00000439717 SUV39H2Q9H5I1 410 aa11.96□□□□□ -0.49
HSPG2-206ENST00000439717 ATP13A3Q9H7F0 1226 aa11.96□□□□□ -0.49
HSPG2-206ENST00000439717 GUCA1BQ9UMX6 200 aa11.96□□□□□ -0.49
HSPG2-206ENST00000439717 FADS3Q9Y5Q0 445 aa11.96□□□□□ -0.49
HSPG2-206ENST00000439717 GPR179Q6PRD1 2367 aa11.96□□□□□ -0.5
HSPG2-206ENST00000439717 CEP192Q8TEP8 1941 aa11.96□□□□□ -0.5
HSPG2-206ENST00000439717 ATXN2Q99700 1313 aaKnown RBP11.95□□□□□ -0.5
HSPG2-206ENST00000439717 A0A1W2PPC4 97 aa11.95□□□□□ -0.5
HSPG2-206ENST00000439717 A0A1W2PQ67 120 aa11.95□□□□□ -0.5
HSPG2-206ENST00000439717 TSPAN11A1L157 253 aa11.95□□□□□ -0.5
HSPG2-206ENST00000439717 MUSKO15146 869 aa11.95□□□□□ -0.5
HSPG2-206ENST00000439717 BCAT2O15382 392 aaPredicted RBP11.95□□□□□ -0.5
HSPG2-206ENST00000439717 LATO43561 262 aa11.95□□□□□ -0.5
HSPG2-206ENST00000439717 TSPAN6O43657 245 aa11.95□□□□□ -0.5
HSPG2-206ENST00000439717 MAP3K6O95382 1288 aa11.95□□□□□ -0.5
HSPG2-206ENST00000439717 SERPINF2P08697 491 aa11.95□□□□□ -0.5
HSPG2-206ENST00000439717 CCNB1P14635 433 aa11.95□□□□□ -0.5
HSPG2-206ENST00000439717 CR2P20023 1033 aa11.95□□□□□ -0.5
HSPG2-206ENST00000439717 CES1P23141 567 aa11.95□□□□□ -0.5
HSPG2-206ENST00000439717 MAOBP27338 520 aa11.95□□□□□ -0.5
HSPG2-206ENST00000439717 DYNLT1P63172 113 aa11.95□□□□□ -0.5
HSPG2-206ENST00000439717 ARHGAP8P85298 464 aa11.95□□□□□ -0.5
HSPG2-206ENST00000439717 BCL2L1Q07817 233 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms