RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 ZNF883P0CG24 379 aa24.35■■□□□ 1.49
CPNE1-217ENST00000439669 ABL2P42684 1182 aa24.35■■□□□ 1.49
CPNE1-217ENST00000439669 ZNF75DP51815 510 aa24.35■■□□□ 1.49
CPNE1-217ENST00000439669 IL10RBQ08334 325 aa24.35■■□□□ 1.49
CPNE1-217ENST00000439669 MESDQ14696 234 aa24.35■■□□□ 1.49
CPNE1-217ENST00000439669 STAT4Q14765 748 aa24.35■■□□□ 1.49
CPNE1-217ENST00000439669 ZNF284Q2VY69 593 aa24.35■■□□□ 1.49
CPNE1-217ENST00000439669 SEL1L3Q68CR1 1132 aa24.35■■□□□ 1.49
CPNE1-217ENST00000439669 NAXDQ8IW45 347 aa24.35■■□□□ 1.49
CPNE1-217ENST00000439669 TP53INP2Q8IXH6 220 aa24.35■■□□□ 1.49
CPNE1-217ENST00000439669 TC2NQ8N9U0 490 aa24.35■■□□□ 1.49
CPNE1-217ENST00000439669 CINPQ9BW66 212 aaPredicted RBP24.35■■□□□ 1.49
CPNE1-217ENST00000439669 KLHL11Q9NVR0 708 aa24.35■■□□□ 1.49
CPNE1-217ENST00000439669 ZFR2Q9UPR6 939 aaKnown RBP24.35■■□□□ 1.49
CPNE1-217ENST00000439669 NEMP1O14524 444 aa24.34■■□□□ 1.49
CPNE1-217ENST00000439669 CCT8P50990 548 aa24.34■■□□□ 1.49
CPNE1-217ENST00000439669 MMRN1Q13201 1228 aa24.34■■□□□ 1.49
CPNE1-217ENST00000439669 ZFYVE27Q5T4F4 411 aa24.34■■□□□ 1.49
CPNE1-217ENST00000439669 SLC35G2Q8TBE7 412 aa24.34■■□□□ 1.49
CPNE1-217ENST00000439669 SETD7Q8WTS6 366 aaKnown RBP24.34■■□□□ 1.49
CPNE1-217ENST00000439669 TSC1Q92574 1164 aa24.34■■□□□ 1.49
CPNE1-217ENST00000439669 RAB7BQ96AH8 199 aa24.34■■□□□ 1.49
CPNE1-217ENST00000439669 CAMK1GQ96NX5 476 aa24.34■■□□□ 1.49
CPNE1-217ENST00000439669 CALN1Q9BXU9 219 aa24.34■■□□□ 1.49
CPNE1-217ENST00000439669 GDF3Q9NR23 364 aa24.34■■□□□ 1.49
CPNE1-217ENST00000439669 RCOR3Q9P2K3 495 aaPredicted RBP24.34■■□□□ 1.49
CPNE1-217ENST00000439669 CA5BQ9Y2D0 317 aa24.34■■□□□ 1.49
CPNE1-217ENST00000439669 TMEM131Q92545 1883 aa24.33■■□□□ 1.49
CPNE1-217ENST00000439669 TLR4O00206 839 aa24.33■■□□□ 1.49
CPNE1-217ENST00000439669 AP1G1O43747 822 aa24.33■■□□□ 1.49
CPNE1-217ENST00000439669 PIGNO95427 931 aa24.33■■□□□ 1.49
CPNE1-217ENST00000439669 CD48P09326 243 aa24.33■■□□□ 1.49
CPNE1-217ENST00000439669 AKT2P31751 481 aa24.33■■□□□ 1.49
CPNE1-217ENST00000439669 MAN1A1P33908 653 aa24.33■■□□□ 1.49
CPNE1-217ENST00000439669 SERPINB6P35237 376 aa24.33■■□□□ 1.49
CPNE1-217ENST00000439669 TAS2R40P59535 323 aa24.33■■□□□ 1.49
CPNE1-217ENST00000439669 RPS21P63220 83 aaKnown RBP24.33■■□□□ 1.49
CPNE1-217ENST00000439669 IL9RQ01113 521 aa24.33■■□□□ 1.49
CPNE1-217ENST00000439669 RFTN1Q14699 578 aaPredicted RBP24.33■■□□□ 1.49
CPNE1-217ENST00000439669 ZNF423Q2M1K9 1284 aa24.33■■□□□ 1.49
CPNE1-217ENST00000439669 ATP13A4Q4VNC1 1196 aa24.33■■□□□ 1.49
CPNE1-217ENST00000439669 KIAA1161Q6NSJ0 714 aa24.33■■□□□ 1.49
CPNE1-217ENST00000439669 RHOT2Q8IXI1 618 aa24.33■■□□□ 1.49
CPNE1-217ENST00000439669 MFSD2AQ8NA29 543 aa24.33■■□□□ 1.49
CPNE1-217ENST00000439669 KCTD6Q8NC69 237 aa24.33■■□□□ 1.49
CPNE1-217ENST00000439669 VOPP1Q96AW1 172 aa24.33■■□□□ 1.49
CPNE1-217ENST00000439669 FEM1CQ96JP0 617 aa24.33■■□□□ 1.49
CPNE1-217ENST00000439669 FZD3Q9NPG1 666 aa24.33■■□□□ 1.49
CPNE1-217ENST00000439669 ITM2BQ9Y287 266 aa24.33■■□□□ 1.49
CPNE1-217ENST00000439669 KNL1Q8NG31 2342 aa24.32■■□□□ 1.48
CPNE1-217ENST00000439669 SPAARA0A1B0GVQ0 90 aa24.32■■□□□ 1.48
CPNE1-217ENST00000439669 KRT7P08729 469 aa24.32■■□□□ 1.48
CPNE1-217ENST00000439669 HNRNPA2B1P22626 353 aaKnown RBP24.32■■□□□ 1.48
CPNE1-217ENST00000439669 NXPH1P58417 271 aa24.32■■□□□ 1.48
CPNE1-217ENST00000439669 TMEM259Q4ZIN3 620 aa24.32■■□□□ 1.48
CPNE1-217ENST00000439669 LRRC73Q5JTD7 316 aa24.32■■□□□ 1.48
CPNE1-217ENST00000439669 PRAMEF14Q5SWL7 426 aa24.32■■□□□ 1.48
CPNE1-217ENST00000439669 TMCO4Q5TGY1 634 aa24.32■■□□□ 1.48
CPNE1-217ENST00000439669 TTC7BQ86TV6 843 aa24.32■■□□□ 1.48
CPNE1-217ENST00000439669 GAS2L3Q86XJ1 694 aa24.32■■□□□ 1.48
CPNE1-217ENST00000439669 ATPAF2Q8N5M1 289 aa24.32■■□□□ 1.48
CPNE1-217ENST00000439669 TSEN2Q8NCE0 465 aaKnown RBP24.32■■□□□ 1.48
CPNE1-217ENST00000439669 RFFLQ8WZ73 363 aa24.32■■□□□ 1.48
CPNE1-217ENST00000439669 MRFAP1L1Q96HT8 127 aa24.32■■□□□ 1.48
CPNE1-217ENST00000439669 CPEB1Q9BZB8 566 aaKnown RBP24.32■■□□□ 1.48
CPNE1-217ENST00000439669 GGT7Q9UJ14 662 aa24.32■■□□□ 1.48
CPNE1-217ENST00000439669 PCDHB9Q9Y5E1 797 aa24.32■■□□□ 1.48
CPNE1-217ENST00000439669 PCDHGB2Q9Y5G2 931 aa24.32■■□□□ 1.48
CPNE1-217ENST00000439669 DOCK9Q9BZ29 2069 aa24.31■■□□□ 1.48
CPNE1-217ENST00000439669 TP53BP1Q12888 1972 aaPredicted RBP24.31■■□□□ 1.48
CPNE1-217ENST00000439669 TSPAN6O43657 245 aa24.31■■□□□ 1.48
CPNE1-217ENST00000439669 DFNA5O60443 496 aa24.31■■□□□ 1.48
CPNE1-217ENST00000439669 MAGEC1O60732 1142 aa24.31■■□□□ 1.48
CPNE1-217ENST00000439669 XPAP23025 273 aaPredicted RBP24.31■■□□□ 1.48
CPNE1-217ENST00000439669 RGRP47804 291 aa24.31■■□□□ 1.48
CPNE1-217ENST00000439669 ARSEP51690 589 aa24.31■■□□□ 1.48
CPNE1-217ENST00000439669 SIM1P81133 766 aaPredicted RBP24.31■■□□□ 1.48
CPNE1-217ENST00000439669 HNRNPDQ14103 355 aaKnown RBP24.31■■□□□ 1.48
CPNE1-217ENST00000439669 DPYSL3Q14195 570 aa24.31■■□□□ 1.48
CPNE1-217ENST00000439669 GRM3Q14832 879 aa24.31■■□□□ 1.48
CPNE1-217ENST00000439669 SUZ12Q15022 739 aaKnown RBP24.31■■□□□ 1.48
CPNE1-217ENST00000439669 CFAP58Q5T655 872 aa24.31■■□□□ 1.48
CPNE1-217ENST00000439669 IQCHQ86VS3 1027 aa24.31■■□□□ 1.48
CPNE1-217ENST00000439669 TMEM145Q8NBT3 493 aa24.31■■□□□ 1.48
CPNE1-217ENST00000439669 FAM71BQ8TC56 605 aa24.31■■□□□ 1.48
CPNE1-217ENST00000439669 ELF4Q99607 663 aaPredicted RBP24.31■■□□□ 1.48
CPNE1-217ENST00000439669 DKK3Q9UBP4 350 aa24.31■■□□□ 1.48
CPNE1-217ENST00000439669 SEPT3Q9UH03 358 aa24.31■■□□□ 1.48
CPNE1-217ENST00000439669 NCOR2Q9Y618 2525 aa24.3■■□□□ 1.48
CPNE1-217ENST00000439669 A0A1B0GTQ1 180 aa24.3■■□□□ 1.48
CPNE1-217ENST00000439669 FLRT2O43155 660 aa24.3■■□□□ 1.48
CPNE1-217ENST00000439669 IL4RP24394 825 aa24.3■■□□□ 1.48
CPNE1-217ENST00000439669 OVGP1Q12889 678 aa24.3■■□□□ 1.48
CPNE1-217ENST00000439669 LBRQ14739 615 aaKnown RBP24.3■■□□□ 1.48
CPNE1-217ENST00000439669 PDK2Q15119 407 aa24.3■■□□□ 1.48
CPNE1-217ENST00000439669 SRLQ86TD4 932 aa24.3■■□□□ 1.48
CPNE1-217ENST00000439669 ZSCAN30Q86W11 494 aa24.3■■□□□ 1.48
CPNE1-217ENST00000439669 MAP7D3Q8IWC1 876 aa24.3■■□□□ 1.48
CPNE1-217ENST00000439669 KLHDC7BQ96G42 594 aa24.3■■□□□ 1.48
CPNE1-217ENST00000439669 ZNF599Q96NL3 588 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms