RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 LSM7Q9UK45 103 aaKnown RBP4.05□□□□□ -1.76
HMGB1P37-201ENST00000439613 VANGL2Q9ULK5 521 aa4.05□□□□□ -1.76
HMGB1P37-201ENST00000439613 ZMYND8Q9ULU4 1186 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P37-201ENST00000439613 AAR2Q9Y312 384 aaKnown RBP4.05□□□□□ -1.76
HMGB1P37-201ENST00000439613 NFS1Q9Y697 457 aa4.05□□□□□ -1.76
HMGB1P37-201ENST00000439613 HELZP42694 1942 aaKnown RBP4.05□□□□□ -1.76
HMGB1P37-201ENST00000439613 GBF1Q92538 1859 aa4.05□□□□□ -1.76
HMGB1P37-201ENST00000439613 MYO7AQ13402 2215 aa4.05□□□□□ -1.76
HMGB1P37-201ENST00000439613 MKI67P46013 3256 aaKnown RBP4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 MYO9BQ13459 2157 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 MIA3Q5JRA6 1907 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 A0A1B0GVM2 712 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 EXOC1LA0A1B0GW35 172 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 ILVBLA1L0T0 632 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 LCHNA4D1U4 455 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 KRBA1A5PL33 1030 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 TCAF2A6NFQ2 919 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 C9orf172C9J069 976 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 RASA4BC9J798 803 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 H3BNC9 293 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 H3BQF6 201 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 GOLGA8MH3BSY2 632 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 KCNK1O00180 336 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 DLL1O00548 723 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 ZNF197O14709 1029 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 POLR3GO15318 223 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 RASA4O43374 803 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 MAFKO60675 156 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 RAMP2O60895 175 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 CDH16O75309 829 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 STC2O76061 302 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 SUN1O94901 812 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 METTL18O95568 372 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 AP2A1O95782 977 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 OLFM2O95897 454 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 RECKO95980 971 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 CPP00450 1065 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 AGTP01019 485 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 JCHAINP01591 159 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 CKMP06732 381 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 C8AP07357 584 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 SPATA31D3P0C874 917 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 MYL4P12829 197 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 VAV1P15498 845 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 GABRR2P28476 465 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 OR1E1P30953 314 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 CORO1AP31146 461 aaKnown RBP4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 STX2P32856 288 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 CD68P34810 354 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 CHKAP35790 457 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 MMP13P45452 471 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 NPY2RP49146 381 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 PAPOLAP51003 745 aaKnown RBP4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 KCNQ1P51787 676 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 CLCN4P51793 760 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 EPHA5P54756 1037 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 GEMP55040 296 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 OXCT1P55809 520 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 GEMIN4P57678 1058 aaKnown RBP4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 ERVK-21P61565 698 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 CBX1P83916 185 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 SMAD3P84022 425 aaKnown RBP4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 GSTM4Q03013 218 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 GABPB1Q06547 395 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 TNK2Q07912 1038 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 IL10RBQ08334 325 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 C19orf57Q0VDD7 668 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 ZNF177Q13360 481 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 GPM6BQ13491 265 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 SERINC3Q13530 473 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 LAMB3Q13751 1172 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 HNRNPDQ14103 355 aaKnown RBP4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 SUZ12Q15022 739 aaKnown RBP4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 RASA2Q15283 850 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 FNBP1LQ5T0N5 605 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 LGSNQ5TDP6 509 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 MARC1Q5VT66 337 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 ANKRD22Q5VYY1 191 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 PLPP4Q5VZY2 271 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 NADSYN1Q6IA69 706 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 NAPEPLDQ6IQ20 393 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 LRRC8BQ6P9F7 803 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 ZNF449Q6P9G9 518 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 SHISA2Q6UWI4 295 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 SPATA31D4Q6ZUB0 917 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 C3orf62Q6ZUJ4 267 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 HTR3DQ70Z44 454 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 CYS1Q717R9 158 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 B4GALNT4Q76KP1 1039 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 TAOK1Q7L7X3 1001 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 TMEM150AQ86TG1 271 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 SETD3Q86TU7 594 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 TDRPQ86YL5 185 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 DENND1CQ8IV53 801 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 CCDC117Q8IWD4 279 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 ARHGAP12Q8IWW6 846 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 BBS5Q8N3I7 341 aa4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 TAB3Q8N5C8 712 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P37-201ENST00000439613 NPWQ8N729 165 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms