RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 Q6ZSR6 202 aa20.61■□□□□ 0.89
NCKIPSD-206ENST00000439518 ARFGAP1Q8N6T3 406 aa20.61■□□□□ 0.89
NCKIPSD-206ENST00000439518 ASB12Q8WXK4 309 aa20.61■□□□□ 0.89
NCKIPSD-206ENST00000439518 IFT43Q96FT9 208 aa20.61■□□□□ 0.89
NCKIPSD-206ENST00000439518 GDAP1L1Q96MZ0 367 aa20.61■□□□□ 0.89
NCKIPSD-206ENST00000439518 KLHL32Q96NJ5 620 aa20.61■□□□□ 0.89
NCKIPSD-206ENST00000439518 LENG8Q96PV6 779 aaPredicted RBP20.61■□□□□ 0.89
NCKIPSD-206ENST00000439518 KLF6Q99612 283 aaPredicted RBP20.61■□□□□ 0.89
NCKIPSD-206ENST00000439518 CALN1Q9BXU9 219 aa20.61■□□□□ 0.89
NCKIPSD-206ENST00000439518 DKK4Q9UBT3 224 aa20.61■□□□□ 0.89
NCKIPSD-206ENST00000439518 MFHAS1Q9Y4C4 1052 aa20.61■□□□□ 0.89
NCKIPSD-206ENST00000439518 POM121BA6NF01 834 aa20.6■□□□□ 0.89
NCKIPSD-206ENST00000439518 TRABD2BA6NFA1 517 aa20.6■□□□□ 0.89
NCKIPSD-206ENST00000439518 TMEM191CA6NGB0 347 aa20.6■□□□□ 0.89
NCKIPSD-206ENST00000439518 IGLON5A6NGN9 336 aa20.6■□□□□ 0.89
NCKIPSD-206ENST00000439518 AREL1O15033 823 aa20.6■□□□□ 0.89
NCKIPSD-206ENST00000439518 ATMINO43313 823 aaPredicted RBP20.6■□□□□ 0.89
NCKIPSD-206ENST00000439518 GZMAP12544 262 aa20.6■□□□□ 0.89
NCKIPSD-206ENST00000439518 CKMT2P17540 419 aa20.6■□□□□ 0.89
NCKIPSD-206ENST00000439518 DESP17661 470 aa20.6■□□□□ 0.89
NCKIPSD-206ENST00000439518 ZNF211Q13398 564 aaPredicted RBP20.6■□□□□ 0.89
NCKIPSD-206ENST00000439518 NR1I3Q14994 352 aa20.6■□□□□ 0.89
NCKIPSD-206ENST00000439518 PROX2Q3B8N5 592 aa20.6■□□□□ 0.89
NCKIPSD-206ENST00000439518 GDPD4Q6W3E5 623 aa20.6■□□□□ 0.89
NCKIPSD-206ENST00000439518 KYAT3Q6YP21 454 aaKnown RBP20.6■□□□□ 0.89
NCKIPSD-206ENST00000439518 ZNF354CQ86Y25 554 aa20.6■□□□□ 0.89
NCKIPSD-206ENST00000439518 DNAAF5Q86Y56 855 aa20.6■□□□□ 0.89
NCKIPSD-206ENST00000439518 DCP2Q8IU60 420 aaKnown RBP20.6■□□□□ 0.89
NCKIPSD-206ENST00000439518 MDM1Q8TC05 714 aa20.6■□□□□ 0.89
NCKIPSD-206ENST00000439518 EDEM3Q9BZQ6 932 aa20.6■□□□□ 0.89
NCKIPSD-206ENST00000439518 LRRC19Q9H756 370 aa20.6■□□□□ 0.89
NCKIPSD-206ENST00000439518 CAAP1Q9H8G2 361 aa20.6■□□□□ 0.89
NCKIPSD-206ENST00000439518 GPATCH2LQ9NWQ4 482 aa20.6■□□□□ 0.89
NCKIPSD-206ENST00000439518 UCKL1Q9NWZ5 548 aa20.6■□□□□ 0.89
NCKIPSD-206ENST00000439518 GGT7Q9UJ14 662 aa20.6■□□□□ 0.89
NCKIPSD-206ENST00000439518 AP4E1Q9UPM8 1137 aa20.6■□□□□ 0.89
NCKIPSD-206ENST00000439518 ITM2BQ9Y287 266 aa20.6■□□□□ 0.89
NCKIPSD-206ENST00000439518 DDX3XO00571 662 aaKnown RBP eCLIP20.59■□□□□ 0.894e-7■■■■■ 32.3
NCKIPSD-206ENST00000439518 SIGLEC6O43699 453 aa20.59■□□□□ 0.89
NCKIPSD-206ENST00000439518 PIAS2O75928 621 aa20.59■□□□□ 0.89
NCKIPSD-206ENST00000439518 FTLP02792 175 aaPredicted RBP20.59■□□□□ 0.89
NCKIPSD-206ENST00000439518 GIMD1P0DJR0 217 aa20.59■□□□□ 0.89
NCKIPSD-206ENST00000439518 PSMA2P25787 234 aa20.59■□□□□ 0.89
NCKIPSD-206ENST00000439518 TPI1P60174 286 aa20.59■□□□□ 0.89
NCKIPSD-206ENST00000439518 RHOAP61586 193 aa20.59■□□□□ 0.89
NCKIPSD-206ENST00000439518 ILKQ13418 452 aa20.59■□□□□ 0.89
NCKIPSD-206ENST00000439518 NETO2Q8NC67 525 aa20.59■□□□□ 0.89
NCKIPSD-206ENST00000439518 ARHGEF26Q96DR7 871 aa20.59■□□□□ 0.89
NCKIPSD-206ENST00000439518 PEBP4Q96S96 227 aa20.59■□□□□ 0.89
NCKIPSD-206ENST00000439518 TRIM7Q9C029 511 aa20.59■□□□□ 0.89
NCKIPSD-206ENST00000439518 LHX3Q9UBR4 397 aa20.59■□□□□ 0.89
NCKIPSD-206ENST00000439518 EIF3CLB5ME19 914 aaKnown RBP20.58■□□□□ 0.89
NCKIPSD-206ENST00000439518 NEMP1O14524 444 aa20.58■□□□□ 0.89
NCKIPSD-206ENST00000439518 IGSF6O95976 241 aa20.58■□□□□ 0.89
NCKIPSD-206ENST00000439518 NDST2P52849 883 aa20.58■□□□□ 0.89
NCKIPSD-206ENST00000439518 SGCGQ13326 291 aa20.58■□□□□ 0.89
NCKIPSD-206ENST00000439518 CYTH1Q15438 398 aa20.58■□□□□ 0.89
NCKIPSD-206ENST00000439518 CA9Q16790 459 aa20.58■□□□□ 0.89
NCKIPSD-206ENST00000439518 CYP4V2Q6ZWL3 525 aaPredicted RBP20.58■□□□□ 0.89
NCKIPSD-206ENST00000439518 PTAR1Q7Z6K3 402 aaPredicted RBP20.58■□□□□ 0.89
NCKIPSD-206ENST00000439518 PDCD7Q8N8D1 485 aaKnown RBP20.58■□□□□ 0.89
NCKIPSD-206ENST00000439518 OR4C6Q8NH72 309 aa20.58■□□□□ 0.89
NCKIPSD-206ENST00000439518 FNIP1Q8TF40 1166 aa20.58■□□□□ 0.89
NCKIPSD-206ENST00000439518 EIF3CQ99613 913 aaKnown RBP20.58■□□□□ 0.89
NCKIPSD-206ENST00000439518 PDFQ9HBH1 243 aa20.58■□□□□ 0.89
NCKIPSD-206ENST00000439518 DONSONQ9NYP3 566 aa20.58■□□□□ 0.89
NCKIPSD-206ENST00000439518 DKK3Q9UBP4 350 aa20.58■□□□□ 0.89
NCKIPSD-206ENST00000439518 RALYQ9UKM9 306 aaKnown RBP20.58■□□□□ 0.89
NCKIPSD-206ENST00000439518 SPTY2D1-AS1A0A0U1RR47 76 aa20.57■□□□□ 0.88
NCKIPSD-206ENST00000439518 ACP1P24666 158 aa20.57■□□□□ 0.88
NCKIPSD-206ENST00000439518 RABIFP47224 123 aa20.57■□□□□ 0.88
NCKIPSD-206ENST00000439518 CLDN6P56747 220 aa20.57■□□□□ 0.88
NCKIPSD-206ENST00000439518 RAD51Q06609 339 aa20.57■□□□□ 0.88
NCKIPSD-206ENST00000439518 KLHL30Q0D2K2 578 aa20.57■□□□□ 0.88
NCKIPSD-206ENST00000439518 FZD2Q14332 565 aa20.57■□□□□ 0.88
NCKIPSD-206ENST00000439518 FIGNQ5HY92 759 aa20.57■□□□□ 0.88
NCKIPSD-206ENST00000439518 ERMARDQ5T6L9 678 aa20.57■□□□□ 0.88
NCKIPSD-206ENST00000439518 TTC7BQ86TV6 843 aa20.57■□□□□ 0.88
NCKIPSD-206ENST00000439518 DENND6BQ8NEG7 585 aa20.57■□□□□ 0.88
NCKIPSD-206ENST00000439518 NBEAQ8NFP9 2946 aa20.57■□□□□ 0.88
NCKIPSD-206ENST00000439518 SNRNP25Q9BV90 132 aaKnown RBP20.57■□□□□ 0.88
NCKIPSD-206ENST00000439518 CPEB1Q9BZB8 566 aaKnown RBP20.57■□□□□ 0.88
NCKIPSD-206ENST00000439518 DHX35Q9H5Z1 703 aaKnown RBP20.57■□□□□ 0.88
NCKIPSD-206ENST00000439518 PCSK1NQ9UHG2 260 aa20.57■□□□□ 0.88
NCKIPSD-206ENST00000439518 J3KR12 359 aa20.56■□□□□ 0.88
NCKIPSD-206ENST00000439518 FPGTO14772 594 aa20.56■□□□□ 0.88
NCKIPSD-206ENST00000439518 INSIG1O15503 277 aa20.56■□□□□ 0.88
NCKIPSD-206ENST00000439518 PRAMEF11O60813 436 aa20.56■□□□□ 0.88
NCKIPSD-206ENST00000439518 TIMP2P16035 220 aa20.56■□□□□ 0.88
NCKIPSD-206ENST00000439518 PFN3P60673 137 aa20.56■□□□□ 0.88
NCKIPSD-206ENST00000439518 CYP4F3Q08477 520 aa20.56■□□□□ 0.88
NCKIPSD-206ENST00000439518 ZNF542PQ5EBM4 170 aa20.56■□□□□ 0.88
NCKIPSD-206ENST00000439518 PSTKQ8IV42 348 aaKnown RBP20.56■□□□□ 0.88
NCKIPSD-206ENST00000439518 CENPTQ96BT3 561 aa20.56■□□□□ 0.88
NCKIPSD-206ENST00000439518 KCTD15Q96SI1 283 aaPredicted RBP20.56■□□□□ 0.88
NCKIPSD-206ENST00000439518 DNAJC28Q9NX36 388 aa20.56■□□□□ 0.88
NCKIPSD-206ENST00000439518 UBA2Q9UBT2 640 aaPredicted RBP20.56■□□□□ 0.88
NCKIPSD-206ENST00000439518 CNOT8Q9UFF9 292 aaKnown RBP20.56■□□□□ 0.88
NCKIPSD-206ENST00000439518 TDRD6O60522 2096 aaKnown RBP20.55■□□□□ 0.88
NCKIPSD-206ENST00000439518 URB1O60287 2271 aaKnown RBP20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms