RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 CCNYQ8ND76 341 aa19.73■□□□□ 0.75
SEMA3B-206ENST00000439487 PPP1R16AQ96I34 528 aa19.73■□□□□ 0.75
SEMA3B-206ENST00000439487 LRIG1Q96JA1 1093 aa19.73■□□□□ 0.75
SEMA3B-206ENST00000439487 TSGA13Q96PP4 275 aa19.73■□□□□ 0.75
SEMA3B-206ENST00000439487 PSKH2Q96QS6 385 aa19.73■□□□□ 0.75
SEMA3B-206ENST00000439487 LGMNQ99538 433 aa19.73■□□□□ 0.75
SEMA3B-206ENST00000439487 HEMGNQ9BXL5 484 aa19.73■□□□□ 0.75
SEMA3B-206ENST00000439487 SMOC1Q9H4F8 434 aa19.73■□□□□ 0.75
SEMA3B-206ENST00000439487 PARD6AQ9NPB6 346 aa19.73■□□□□ 0.75
SEMA3B-206ENST00000439487 TMEM74BQ9NUR3 256 aa19.73■□□□□ 0.75
SEMA3B-206ENST00000439487 SAE1Q9UBE0 346 aaPredicted RBP19.73■□□□□ 0.75
SEMA3B-206ENST00000439487 PCDHGA5Q9Y5G8 931 aa19.73■□□□□ 0.75
SEMA3B-206ENST00000439487 LRRC72A6NJI9 287 aa19.72■□□□□ 0.75
SEMA3B-206ENST00000439487 MATN3O15232 486 aa19.72■□□□□ 0.75
SEMA3B-206ENST00000439487 SLC7A4O43246 635 aa19.72■□□□□ 0.75
SEMA3B-206ENST00000439487 PLRG1O43660 514 aaKnown RBP19.72■□□□□ 0.75
SEMA3B-206ENST00000439487 FSBPO95073 299 aa19.72■□□□□ 0.75
SEMA3B-206ENST00000439487 ITGB7P26010 798 aa19.72■□□□□ 0.75
SEMA3B-206ENST00000439487 MMP13P45452 471 aa19.72■□□□□ 0.75
SEMA3B-206ENST00000439487 CSNK1DP48730 415 aa19.72■□□□□ 0.75
SEMA3B-206ENST00000439487 SCNN1BP51168 640 aa19.72■□□□□ 0.75
SEMA3B-206ENST00000439487 RENBPP51606 427 aa19.72■□□□□ 0.75
SEMA3B-206ENST00000439487 TAS2R38P59533 333 aa19.72■□□□□ 0.75
SEMA3B-206ENST00000439487 COPS2P61201 443 aa19.72■□□□□ 0.75
SEMA3B-206ENST00000439487 NSUN2Q08J23 767 aaKnown RBP eCLIP19.72■□□□□ 0.75
SEMA3B-206ENST00000439487 PPP2R5EQ16537 467 aa19.72■□□□□ 0.75
SEMA3B-206ENST00000439487 ZNF805Q5CZA5 627 aa19.72■□□□□ 0.75
SEMA3B-206ENST00000439487 MARC1Q5VT66 337 aa19.72■□□□□ 0.75
SEMA3B-206ENST00000439487 KIAA0895LQ68EN5 471 aa19.72■□□□□ 0.75
SEMA3B-206ENST00000439487 TIGD7Q6NT04 549 aaPredicted RBP19.72■□□□□ 0.75
SEMA3B-206ENST00000439487 B4GALNT4Q76KP1 1039 aa19.72■□□□□ 0.75
SEMA3B-206ENST00000439487 PARS2Q7L3T8 475 aaKnown RBP19.72■□□□□ 0.75
SEMA3B-206ENST00000439487 CCDC13Q8IYE1 715 aa19.72■□□□□ 0.75
SEMA3B-206ENST00000439487 BBS5Q8N3I7 341 aa19.72■□□□□ 0.75
SEMA3B-206ENST00000439487 UBL4BQ8N7F7 174 aa19.72■□□□□ 0.75
SEMA3B-206ENST00000439487 OR2T34Q8NGX1 318 aa19.72■□□□□ 0.75
SEMA3B-206ENST00000439487 SNX19Q92543 992 aa19.72■□□□□ 0.75
SEMA3B-206ENST00000439487 MAML1Q92585 1016 aa19.72■□□□□ 0.75
SEMA3B-206ENST00000439487 HDAC11Q96DB2 347 aa19.72■□□□□ 0.75
SEMA3B-206ENST00000439487 HERPUD2Q9BSE4 406 aa19.72■□□□□ 0.75
SEMA3B-206ENST00000439487 OSBPL1AQ9BXW6 950 aa19.72■□□□□ 0.75
SEMA3B-206ENST00000439487 HDAC8Q9BY41 377 aa19.72■□□□□ 0.75
SEMA3B-206ENST00000439487 CPEB1Q9BZB8 566 aaKnown RBP19.72■□□□□ 0.75
SEMA3B-206ENST00000439487 PCED1AQ9H1Q7 454 aa19.72■□□□□ 0.75
SEMA3B-206ENST00000439487 NT5MQ9NPB1 228 aa19.72■□□□□ 0.75
SEMA3B-206ENST00000439487 TBC1D3DA0A087WVF3 549 aa19.71■□□□□ 0.75
SEMA3B-206ENST00000439487 TBC1D3IA0A087WXS9 549 aa19.71■□□□□ 0.75
SEMA3B-206ENST00000439487 TBC1D3EA0A087X179 549 aa19.71■□□□□ 0.75
SEMA3B-206ENST00000439487 TBC1D3KA0A087X1G2 549 aa19.71■□□□□ 0.75
SEMA3B-206ENST00000439487 TBC1D3FA6NER0 549 aaPredicted RBP19.71■□□□□ 0.75
SEMA3B-206ENST00000439487 C16orf96A6NNT2 1141 aa19.71■□□□□ 0.75
SEMA3B-206ENST00000439487 MIF4GDA9UHW6 222 aaKnown RBP19.71■□□□□ 0.75
SEMA3B-206ENST00000439487 TBC1D3LB9A6J9 549 aa19.71■□□□□ 0.75
SEMA3B-206ENST00000439487 TBC1D3HP0C7X1 549 aa19.71■□□□□ 0.75
SEMA3B-206ENST00000439487 PYGMP11217 842 aa19.71■□□□□ 0.75
SEMA3B-206ENST00000439487 PECAM1P16284 738 aaPredicted RBP19.71■□□□□ 0.75
SEMA3B-206ENST00000439487 NEK3P51956 506 aa19.71■□□□□ 0.75
SEMA3B-206ENST00000439487 MAXP61244 160 aa19.71■□□□□ 0.75
SEMA3B-206ENST00000439487 HNRNPDQ14103 355 aaKnown RBP19.71■□□□□ 0.75
SEMA3B-206ENST00000439487 WDR45BQ5MNZ6 344 aa19.71■□□□□ 0.75
SEMA3B-206ENST00000439487 PLA2G2CQ5R387 149 aa19.71■□□□□ 0.75
SEMA3B-206ENST00000439487 SYCP2LQ5T4T6 812 aa19.71■□□□□ 0.75
SEMA3B-206ENST00000439487 TBC1D3GQ6DHY5 549 aa19.71■□□□□ 0.75
SEMA3B-206ENST00000439487 TBC1D3CQ6IPX1 549 aa19.71■□□□□ 0.75
SEMA3B-206ENST00000439487 FBXL19Q6PCT2 694 aa19.71■□□□□ 0.75
SEMA3B-206ENST00000439487 SYT12Q8IV01 421 aa19.71■□□□□ 0.75
SEMA3B-206ENST00000439487 TBC1D3Q8IZP1 549 aaPredicted RBP19.71■□□□□ 0.75
SEMA3B-206ENST00000439487 TEX26Q8N6G2 289 aa19.71■□□□□ 0.75
SEMA3B-206ENST00000439487 BIRC7Q96CA5 298 aa19.71■□□□□ 0.75
SEMA3B-206ENST00000439487 HAUS1Q96CS2 278 aa19.71■□□□□ 0.75
SEMA3B-206ENST00000439487 HES6Q96HZ4 224 aa19.71■□□□□ 0.75
SEMA3B-206ENST00000439487 NSMCE3Q96MG7 304 aa19.71■□□□□ 0.75
SEMA3B-206ENST00000439487 OLFM3Q96PB7 478 aa19.71■□□□□ 0.75
SEMA3B-206ENST00000439487 OSBPL8Q9BZF1 889 aa19.71■□□□□ 0.75
SEMA3B-206ENST00000439487 PILRBQ9UKJ0 227 aa19.71■□□□□ 0.75
SEMA3B-206ENST00000439487 LAMA1P25391 3075 aa19.71■□□□□ 0.75
SEMA3B-206ENST00000439487 IGHV4-34P06331 123 aa19.7■□□□□ 0.74
SEMA3B-206ENST00000439487 ADRB3P13945 408 aa19.7■□□□□ 0.74
SEMA3B-206ENST00000439487 TGM2P21980 687 aa19.7■□□□□ 0.74
SEMA3B-206ENST00000439487 TGM1P22735 817 aa19.7■□□□□ 0.74
SEMA3B-206ENST00000439487 HSPA9P38646 679 aaKnown RBP19.7■□□□□ 0.74
SEMA3B-206ENST00000439487 PPP2CBP62714 309 aa19.7■□□□□ 0.74
SEMA3B-206ENST00000439487 PPP2CAP67775 309 aa19.7■□□□□ 0.74
SEMA3B-206ENST00000439487 PPIDQ08752 370 aaKnown RBP19.7■□□□□ 0.74
SEMA3B-206ENST00000439487 CCDC15Q0P6D6 951 aa19.7■□□□□ 0.74
SEMA3B-206ENST00000439487 AP1B1Q10567 949 aa19.7■□□□□ 0.74
SEMA3B-206ENST00000439487 ZNF211Q13398 564 aaPredicted RBP19.7■□□□□ 0.74
SEMA3B-206ENST00000439487 PDK1Q15118 436 aa19.7■□□□□ 0.74
SEMA3B-206ENST00000439487 FAM182AQ5T1J6 154 aa19.7■□□□□ 0.74
SEMA3B-206ENST00000439487 BBS12Q6ZW61 710 aa19.7■□□□□ 0.74
SEMA3B-206ENST00000439487 CAMK1DQ8IU85 385 aa19.7■□□□□ 0.74
SEMA3B-206ENST00000439487 DNASE2BQ8WZ79 361 aa19.7■□□□□ 0.74
SEMA3B-206ENST00000439487 FATE1Q969F0 183 aa19.7■□□□□ 0.74
SEMA3B-206ENST00000439487 MGME1Q9BQP7 344 aa19.7■□□□□ 0.74
SEMA3B-206ENST00000439487 MIR1-1HGQ9H1L0 117 aa19.7■□□□□ 0.74
SEMA3B-206ENST00000439487 SUV39H2Q9H5I1 410 aa19.7■□□□□ 0.74
SEMA3B-206ENST00000439487 VPS45Q9NRW7 570 aa19.7■□□□□ 0.74
SEMA3B-206ENST00000439487 SEMA4GQ9NTN9 838 aa19.7■□□□□ 0.74
SEMA3B-206ENST00000439487 RBM22Q9NW64 420 aaKnown RBP eCLIP19.7■□□□□ 0.74
SEMA3B-206ENST00000439487 EIF2B4Q9UI10 523 aaKnown RBP19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms