RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 JUNP05412 331 aaKnown RBP16.6■□□□□ 0.25
CLCNKA-203ENST00000439316 POLD2P49005 469 aa16.6■□□□□ 0.25
CLCNKA-203ENST00000439316 CXCR3P49682 368 aa16.6■□□□□ 0.25
CLCNKA-203ENST00000439316 PGGT1BP53609 377 aa16.6■□□□□ 0.25
CLCNKA-203ENST00000439316 MRPS22P82650 360 aaKnown RBP16.6■□□□□ 0.25
CLCNKA-203ENST00000439316 UGP2Q16851 508 aa16.6■□□□□ 0.25
CLCNKA-203ENST00000439316 RARS2Q5T160 578 aaKnown RBP16.6■□□□□ 0.25
CLCNKA-203ENST00000439316 TMEM198Q66K66 360 aa16.6■□□□□ 0.25
CLCNKA-203ENST00000439316 SLC41A1Q8IVJ1 513 aa16.6■□□□□ 0.25
CLCNKA-203ENST00000439316 CNTD1Q8N815 330 aa16.6■□□□□ 0.25
CLCNKA-203ENST00000439316 PDCD6IPQ8WUM4 868 aaKnown RBP16.6■□□□□ 0.25
CLCNKA-203ENST00000439316 NAT14Q8WUY8 206 aa16.6■□□□□ 0.25
CLCNKA-203ENST00000439316 GPR78Q96P69 363 aa16.6■□□□□ 0.25
CLCNKA-203ENST00000439316 XPR1Q9UBH6 696 aa16.6■□□□□ 0.25
CLCNKA-203ENST00000439316 BCAP29Q9UHQ4 241 aa16.6■□□□□ 0.25
CLCNKA-203ENST00000439316 G3BP2Q9UN86 482 aaKnown RBP16.6■□□□□ 0.25
CLCNKA-203ENST00000439316 TRPV2Q9Y5S1 764 aa16.6■□□□□ 0.25
CLCNKA-203ENST00000439316 FRMPD3Q5JV73 1810 aa16.6■□□□□ 0.25
CLCNKA-203ENST00000439316 DNAJA2O60884 412 aa16.59■□□□□ 0.25
CLCNKA-203ENST00000439316 LRIG2O94898 1065 aa16.59■□□□□ 0.25
CLCNKA-203ENST00000439316 RTN3O95197 1032 aaPredicted RBP16.59■□□□□ 0.25
CLCNKA-203ENST00000439316 AHSGP02765 367 aa16.59■□□□□ 0.25
CLCNKA-203ENST00000439316 USP17L7P0C7H9 530 aa16.59■□□□□ 0.25
CLCNKA-203ENST00000439316 SAT1P21673 171 aa16.59■□□□□ 0.25
CLCNKA-203ENST00000439316 AVPR1AP37288 418 aa16.59■□□□□ 0.25
CLCNKA-203ENST00000439316 DPP6P42658 865 aa16.59■□□□□ 0.25
CLCNKA-203ENST00000439316 ZNF33AQ06730 810 aa16.59■□□□□ 0.25
CLCNKA-203ENST00000439316 PCID2Q5JVF3 399 aa16.59■□□□□ 0.25
CLCNKA-203ENST00000439316 PM20D1Q6GTS8 502 aa16.59■□□□□ 0.25
CLCNKA-203ENST00000439316 PKN3Q6P5Z2 889 aa16.59■□□□□ 0.25
CLCNKA-203ENST00000439316 CATSPER1Q8NEC5 780 aa16.59■□□□□ 0.25
CLCNKA-203ENST00000439316 DLG3Q92796 817 aa16.59■□□□□ 0.25
CLCNKA-203ENST00000439316 PPP1R10Q96QC0 940 aaKnown RBP16.59■□□□□ 0.25
CLCNKA-203ENST00000439316 Q9H521 79 aa16.59■□□□□ 0.25
CLCNKA-203ENST00000439316 WDR41Q9HAD4 459 aa16.59■□□□□ 0.25
CLCNKA-203ENST00000439316 VCX3AQ9NNX9 186 aa16.59■□□□□ 0.25
CLCNKA-203ENST00000439316 TRMT13Q9NUP7 481 aaKnown RBP16.59■□□□□ 0.25
CLCNKA-203ENST00000439316 TMEM30AQ9NV96 361 aa16.59■□□□□ 0.25
CLCNKA-203ENST00000439316 OR12D3Q9UGF7 316 aa16.59■□□□□ 0.25
CLCNKA-203ENST00000439316 RAB26Q9ULW5 256 aa16.59■□□□□ 0.25
CLCNKA-203ENST00000439316 ACOT9Q9Y305 439 aa16.59■□□□□ 0.25
CLCNKA-203ENST00000439316 CCDC78A2IDD5 438 aa16.58■□□□□ 0.25
CLCNKA-203ENST00000439316 ANKRD33BA6NCL7 494 aa16.58■□□□□ 0.25
CLCNKA-203ENST00000439316 CAPNS1P04632 268 aa16.58■□□□□ 0.25
CLCNKA-203ENST00000439316 IGFBP6P24592 240 aaPredicted RBP16.58■□□□□ 0.25
CLCNKA-203ENST00000439316 THPOP40225 353 aa16.58■□□□□ 0.25
CLCNKA-203ENST00000439316 CLCN2P51788 898 aa16.58■□□□□ 0.25
CLCNKA-203ENST00000439316 RAB10P61026 200 aa16.58■□□□□ 0.25
CLCNKA-203ENST00000439316 COG7P83436 770 aa16.58■□□□□ 0.25
CLCNKA-203ENST00000439316 TSTD2Q5T7W7 516 aa16.58■□□□□ 0.25
CLCNKA-203ENST00000439316 OTOP3Q7RTS5 596 aa16.58■□□□□ 0.25
CLCNKA-203ENST00000439316 CTU1Q7Z7A3 348 aaKnown RBP16.58■□□□□ 0.25
CLCNKA-203ENST00000439316 MFSD6LQ8IWD5 586 aa16.58■□□□□ 0.25
CLCNKA-203ENST00000439316 KDM1BQ8NB78 822 aa16.58■□□□□ 0.25
CLCNKA-203ENST00000439316 ADCY4Q8NFM4 1077 aa16.58■□□□□ 0.25
CLCNKA-203ENST00000439316 MAELQ96JY0 434 aaKnown RBP16.58■□□□□ 0.25
CLCNKA-203ENST00000439316 LRGUKQ96M69 825 aa16.58■□□□□ 0.25
CLCNKA-203ENST00000439316 SENP6Q9GZR1 1112 aaPredicted RBP16.58■□□□□ 0.25
CLCNKA-203ENST00000439316 TKTL2Q9H0I9 626 aa16.58■□□□□ 0.25
CLCNKA-203ENST00000439316 NDUFA13Q9P0J0 144 aa16.58■□□□□ 0.25
CLCNKA-203ENST00000439316 COPG1Q9Y678 874 aaKnown RBP16.58■□□□□ 0.25
CLCNKA-203ENST00000439316 PRSS51A0A1B0GVH4 220 aa16.58■□□□□ 0.24
CLCNKA-203ENST00000439316 HHLA1C9JL84 531 aa16.58■□□□□ 0.24
CLCNKA-203ENST00000439316 NPHS1O60500 1241 aa16.58■□□□□ 0.24
CLCNKA-203ENST00000439316 BCAS2O75934 225 aaPredicted RBP16.58■□□□□ 0.24
CLCNKA-203ENST00000439316 SRGAP2BP0DMP2 458 aa16.58■□□□□ 0.24
CLCNKA-203ENST00000439316 ME2P23368 584 aa16.58■□□□□ 0.24
CLCNKA-203ENST00000439316 PKNOX1P55347 436 aa16.58■□□□□ 0.24
CLCNKA-203ENST00000439316 MPP1Q00013 466 aa16.58■□□□□ 0.24
CLCNKA-203ENST00000439316 MS4A2Q01362 244 aa16.58■□□□□ 0.24
CLCNKA-203ENST00000439316 LSAMPQ13449 338 aa16.58■□□□□ 0.24
CLCNKA-203ENST00000439316 CNGA3Q16281 694 aa16.58■□□□□ 0.24
CLCNKA-203ENST00000439316 DCLRE1AQ6PJP8 1040 aa16.58■□□□□ 0.24
CLCNKA-203ENST00000439316 BHLHE22Q8NFJ8 381 aaPredicted RBP16.58■□□□□ 0.24
CLCNKA-203ENST00000439316 PCED1BQ96HM7 432 aa16.58■□□□□ 0.24
CLCNKA-203ENST00000439316 CELF6Q96J87 481 aaKnown RBP16.58■□□□□ 0.24
CLCNKA-203ENST00000439316 GLT1D1Q96MS3 346 aa16.58■□□□□ 0.24
CLCNKA-203ENST00000439316 TBL1YQ9BQ87 522 aa16.58■□□□□ 0.24
CLCNKA-203ENST00000439316 BEGAINQ9BUH8 593 aa16.58■□□□□ 0.24
CLCNKA-203ENST00000439316 WDCPQ9H6R7 721 aa16.58■□□□□ 0.24
CLCNKA-203ENST00000439316 EFCAB1Q9HAE3 211 aa16.58■□□□□ 0.24
CLCNKA-203ENST00000439316 FAM95CA0A1B0GW59 222 aa16.57■□□□□ 0.24
CLCNKA-203ENST00000439316 TCAF2A6NFQ2 919 aa16.57■□□□□ 0.24
CLCNKA-203ENST00000439316 MOXD2PA6NHM9 499 aa16.57■□□□□ 0.24
CLCNKA-203ENST00000439316 CRTAMO95727 393 aa16.57■□□□□ 0.24
CLCNKA-203ENST00000439316 ENO3P13929 434 aaPredicted RBP16.57■□□□□ 0.24
CLCNKA-203ENST00000439316 PMLP29590 882 aa16.57■□□□□ 0.24
CLCNKA-203ENST00000439316 ARCN1P48444 511 aaKnown RBP16.57■□□□□ 0.24
CLCNKA-203ENST00000439316 PPP2R5DQ14738 602 aa16.57■□□□□ 0.24
CLCNKA-203ENST00000439316 PDCD2Q16342 344 aaPredicted RBP16.57■□□□□ 0.24
CLCNKA-203ENST00000439316 NXNQ6DKJ4 435 aa16.57■□□□□ 0.24
CLCNKA-203ENST00000439316 SATL1Q86VE3 508 aa16.57■□□□□ 0.24
CLCNKA-203ENST00000439316 CEP97Q8IW35 865 aa16.57■□□□□ 0.24
CLCNKA-203ENST00000439316 CCDC117Q8IWD4 279 aaPredicted RBP16.57■□□□□ 0.24
CLCNKA-203ENST00000439316 LILRA2Q8N149 483 aa16.57■□□□□ 0.24
CLCNKA-203ENST00000439316 NUP205Q92621 2012 aa16.57■□□□□ 0.24
CLCNKA-203ENST00000439316 USP13Q92995 863 aaPredicted RBP16.57■□□□□ 0.24
CLCNKA-203ENST00000439316 MARK4Q96L34 752 aa16.57■□□□□ 0.24
CLCNKA-203ENST00000439316 SENP8Q96LD8 212 aa16.57■□□□□ 0.24
CLCNKA-203ENST00000439316 UBAP1Q9NZ09 502 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms