RNA–Protein interactions for RNA: ENST00000439080.6

TARDBP-203, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-203ENST00000439080 ZC3H18Q86VM9 953 aaKnown RBP17.13■□□□□ 0.33
TARDBP-203ENST00000439080 SLC35F6Q8N357 371 aa17.13■□□□□ 0.33
TARDBP-203ENST00000439080 ACTL9Q8TC94 416 aa17.13■□□□□ 0.33
TARDBP-203ENST00000439080 TFB1MQ8WVM0 346 aaKnown RBP17.13■□□□□ 0.33
TARDBP-203ENST00000439080 FAM131CQ96AQ9 280 aa17.13■□□□□ 0.33
TARDBP-203ENST00000439080 ZC3H10Q96K80 434 aaKnown RBP17.13■□□□□ 0.33
TARDBP-203ENST00000439080 QKIQ96PU8 341 aaKnown RBP eCLIP17.13■□□□□ 0.33
TARDBP-203ENST00000439080 GPR174Q9BXC1 333 aa17.13■□□□□ 0.33
TARDBP-203ENST00000439080 BTBD1Q9H0C5 482 aa17.13■□□□□ 0.33
TARDBP-203ENST00000439080 DUSP15Q9H1R2 295 aaPredicted RBP17.13■□□□□ 0.33
TARDBP-203ENST00000439080 NEUROG2Q9H2A3 272 aa17.13■□□□□ 0.33
TARDBP-203ENST00000439080 SEMA4AQ9H3S1 761 aa17.13■□□□□ 0.33
TARDBP-203ENST00000439080 SGK2Q9HBY8 427 aa17.13■□□□□ 0.33
TARDBP-203ENST00000439080 SEPT10Q9P0V9 454 aa17.13■□□□□ 0.33
TARDBP-203ENST00000439080 RAB23Q9ULC3 237 aa17.13■□□□□ 0.33
TARDBP-203ENST00000439080 TP53BP1Q12888 1972 aaPredicted RBP17.13■□□□□ 0.33
TARDBP-203ENST00000439080 LAMA1P25391 3075 aa17.12■□□□□ 0.33
TARDBP-203ENST00000439080 RALGAPA1Q6GYQ0 2036 aa17.12■□□□□ 0.33
TARDBP-203ENST00000439080 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.12■□□□□ 0.33
TARDBP-203ENST00000439080 PROB1E7EW31 1015 aa17.12■□□□□ 0.33
TARDBP-203ENST00000439080 ENC1O14682 589 aa17.12■□□□□ 0.33
TARDBP-203ENST00000439080 NEBLO76041 1014 aa17.12■□□□□ 0.33
TARDBP-203ENST00000439080 SEMA4FO95754 770 aa17.12■□□□□ 0.33
TARDBP-203ENST00000439080 CR2P20023 1033 aa17.12■□□□□ 0.33
TARDBP-203ENST00000439080 MAPK8P45983 427 aa17.12■□□□□ 0.33
TARDBP-203ENST00000439080 CSNK1DP48730 415 aa17.12■□□□□ 0.33
TARDBP-203ENST00000439080 SCNN1BP51168 640 aa17.12■□□□□ 0.33
TARDBP-203ENST00000439080 AP1S1P61966 158 aa17.12■□□□□ 0.33
TARDBP-203ENST00000439080 NSUN2Q08J23 767 aaKnown RBP eCLIP17.12■□□□□ 0.33
TARDBP-203ENST00000439080 GRM3Q14832 879 aa17.12■□□□□ 0.33
TARDBP-203ENST00000439080 PIP5KL1Q5T9C9 394 aa17.12■□□□□ 0.33
TARDBP-203ENST00000439080 GDPD4Q6W3E5 623 aa17.12■□□□□ 0.33
TARDBP-203ENST00000439080 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.12■□□□□ 0.33
TARDBP-203ENST00000439080 ARMCX6Q7L4S7 300 aa17.12■□□□□ 0.33
TARDBP-203ENST00000439080 LPCAT2Q7L5N7 544 aa17.12■□□□□ 0.33
TARDBP-203ENST00000439080 TMEFF1Q8IYR6 380 aa17.12■□□□□ 0.33
TARDBP-203ENST00000439080 SUMF1Q8NBK3 374 aa17.12■□□□□ 0.33
TARDBP-203ENST00000439080 NKD2Q969F2 451 aaPredicted RBP17.12■□□□□ 0.33
TARDBP-203ENST00000439080 KLHL32Q96NJ5 620 aa17.12■□□□□ 0.33
TARDBP-203ENST00000439080 NUDCD1Q96RS6 583 aa17.12■□□□□ 0.33
TARDBP-203ENST00000439080 TUBGCP5Q96RT8 1024 aa17.12■□□□□ 0.33
TARDBP-203ENST00000439080 FAM118BQ9BPY3 351 aa17.12■□□□□ 0.33
TARDBP-203ENST00000439080 CEP41Q9BYV8 373 aa17.12■□□□□ 0.33
TARDBP-203ENST00000439080 CPEB1Q9BZB8 566 aaKnown RBP17.12■□□□□ 0.33
TARDBP-203ENST00000439080 POLR1EQ9GZS1 481 aaKnown RBP17.12■□□□□ 0.33
TARDBP-203ENST00000439080 ATP13A3Q9H7F0 1226 aa17.12■□□□□ 0.33
TARDBP-203ENST00000439080 SCUBE2Q9NQ36 999 aa17.12■□□□□ 0.33
TARDBP-203ENST00000439080 HAUS2Q9NVX0 235 aa17.12■□□□□ 0.33
TARDBP-203ENST00000439080 RBM22Q9NW64 420 aaKnown RBP eCLIP17.12■□□□□ 0.332e-7■■■■■ 31.6
TARDBP-203ENST00000439080 JRKLQ9Y4A0 524 aa17.12■□□□□ 0.33
TARDBP-203ENST00000439080 LRRK1Q38SD2 2015 aa17.11■□□□□ 0.33
TARDBP-203ENST00000439080 TTC24A2A3L6 582 aaPredicted RBP17.11■□□□□ 0.33
TARDBP-203ENST00000439080 SLC7A4O43246 635 aa17.11■□□□□ 0.33
TARDBP-203ENST00000439080 RHOBTB1O94844 696 aa17.11■□□□□ 0.33
TARDBP-203ENST00000439080 LMNAP02545 664 aaKnown RBP17.11■□□□□ 0.33
TARDBP-203ENST00000439080 MSNP26038 577 aaKnown RBP17.11■□□□□ 0.33
TARDBP-203ENST00000439080 NEK3P51956 506 aa17.11■□□□□ 0.33
TARDBP-203ENST00000439080 ZNF805Q5CZA5 627 aa17.11■□□□□ 0.33
TARDBP-203ENST00000439080 ERN2Q76MJ5 926 aaKnown RBP17.11■□□□□ 0.33
TARDBP-203ENST00000439080 DEFB119Q8N690 84 aa17.11■□□□□ 0.33
TARDBP-203ENST00000439080 OR14C36Q8NHC7 312 aa17.11■□□□□ 0.33
TARDBP-203ENST00000439080 IL12RB2Q99665 862 aa17.11■□□□□ 0.33
TARDBP-203ENST00000439080 HDAC8Q9BY41 377 aa17.11■□□□□ 0.33
TARDBP-203ENST00000439080 AMACRQ9UHK6 382 aa17.11■□□□□ 0.33
TARDBP-203ENST00000439080 TCRBV7S2A1N4TA0A589 114 aa17.1■□□□□ 0.33
TARDBP-203ENST00000439080 FAM47DPA6NHR8 397 aa17.1■□□□□ 0.33
TARDBP-203ENST00000439080 HACD1B0YJ81 288 aa17.1■□□□□ 0.33
TARDBP-203ENST00000439080 H7C0C1 242 aa17.1■□□□□ 0.33
TARDBP-203ENST00000439080 PLRG1O43660 514 aaKnown RBP17.1■□□□□ 0.33
TARDBP-203ENST00000439080 JCHAINP01591 159 aa17.1■□□□□ 0.33
TARDBP-203ENST00000439080 ADRB3P13945 408 aa17.1■□□□□ 0.33
TARDBP-203ENST00000439080 SERPINA4P29622 427 aa17.1■□□□□ 0.33
TARDBP-203ENST00000439080 PTGER3P43115 390 aa17.1■□□□□ 0.33
TARDBP-203ENST00000439080 ATP5OP48047 213 aa17.1■□□□□ 0.33
TARDBP-203ENST00000439080 DHPSP49366 369 aaPredicted RBP17.1■□□□□ 0.33
TARDBP-203ENST00000439080 ITKQ08881 620 aa17.1■□□□□ 0.33
TARDBP-203ENST00000439080 XRCC4Q13426 336 aa17.1■□□□□ 0.33
TARDBP-203ENST00000439080 SLC45A4Q5BKX6 768 aa17.1■□□□□ 0.33
TARDBP-203ENST00000439080 FAM182AQ5T1J6 154 aa17.1■□□□□ 0.33
TARDBP-203ENST00000439080 CFAP58Q5T655 872 aa17.1■□□□□ 0.33
TARDBP-203ENST00000439080 ALG1LQ6GMV1 187 aa17.1■□□□□ 0.33
TARDBP-203ENST00000439080 LAIR1Q6GTX8 287 aa17.1■□□□□ 0.33
TARDBP-203ENST00000439080 NCEH1Q6PIU2 408 aa17.1■□□□□ 0.33
TARDBP-203ENST00000439080 NSMCE3Q96MG7 304 aa17.1■□□□□ 0.33
TARDBP-203ENST00000439080 HSPA12BQ96MM6 686 aa17.1■□□□□ 0.33
TARDBP-203ENST00000439080 SEMA3CQ99985 751 aa17.1■□□□□ 0.33
TARDBP-203ENST00000439080 C6orf106Q9H6K1 298 aaPredicted RBP17.1■□□□□ 0.33
TARDBP-203ENST00000439080 NOD2Q9HC29 1040 aa17.1■□□□□ 0.33
TARDBP-203ENST00000439080 DOCK9Q9BZ29 2069 aa17.09■□□□□ 0.33
TARDBP-203ENST00000439080 C16orf96A6NNT2 1141 aa17.09■□□□□ 0.33
TARDBP-203ENST00000439080 ATP1A1P05023 1023 aaKnown RBP17.09■□□□□ 0.33
TARDBP-203ENST00000439080 PTPN3P26045 913 aa17.09■□□□□ 0.33
TARDBP-203ENST00000439080 CXCR5P32302 372 aa17.09■□□□□ 0.33
TARDBP-203ENST00000439080 TAS2R38P59533 333 aa17.09■□□□□ 0.33
TARDBP-203ENST00000439080 EIF3EP60228 445 aaKnown RBP17.09■□□□□ 0.33
TARDBP-203ENST00000439080 DSC2Q02487 901 aa17.09■□□□□ 0.33
TARDBP-203ENST00000439080 BCL2L1Q07817 233 aa17.09■□□□□ 0.33
TARDBP-203ENST00000439080 CCDC15Q0P6D6 951 aa17.09■□□□□ 0.33
TARDBP-203ENST00000439080 RALGPS1Q5JS13 557 aa17.09■□□□□ 0.33
TARDBP-203ENST00000439080 SPDYCQ5MJ68 293 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms