RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 TTLL9Q3SXZ7 439 aa11.69□□□□□ -0.54
TRAPPC9-202ENST00000438773 RAB6CQ53S08 254 aa11.69□□□□□ -0.54
TRAPPC9-202ENST00000438773 ARMC12Q5T9G4 340 aa11.69□□□□□ -0.54
TRAPPC9-202ENST00000438773 SNX30Q5VWJ9 437 aa11.69□□□□□ -0.54
TRAPPC9-202ENST00000438773 HIC2Q96JB3 615 aa11.69□□□□□ -0.54
TRAPPC9-202ENST00000438773 CCDC138Q96M89 665 aa11.69□□□□□ -0.54
TRAPPC9-202ENST00000438773 RAB6CQ9H0N0 254 aa11.69□□□□□ -0.54
TRAPPC9-202ENST00000438773 GBA3Q9H227 469 aa11.69□□□□□ -0.54
TRAPPC9-202ENST00000438773 ARHGAP26Q9UNA1 814 aa11.69□□□□□ -0.54
TRAPPC9-202ENST00000438773 TRAV19A0A0A6YYK7 116 aa11.69□□□□□ -0.54
TRAPPC9-202ENST00000438773 HAS3O00219 553 aa11.69□□□□□ -0.54
TRAPPC9-202ENST00000438773 PEX11AO75192 247 aa11.69□□□□□ -0.54
TRAPPC9-202ENST00000438773 MT-CO1P00395 513 aa11.69□□□□□ -0.54
TRAPPC9-202ENST00000438773 ACRP10323 421 aa11.69□□□□□ -0.54
TRAPPC9-202ENST00000438773 TACR2P21452 398 aa11.69□□□□□ -0.54
TRAPPC9-202ENST00000438773 MAP4P27816 1152 aaKnown RBP11.69□□□□□ -0.54
TRAPPC9-202ENST00000438773 SLC11A1P49279 550 aa11.69□□□□□ -0.54
TRAPPC9-202ENST00000438773 GATMP50440 423 aa11.69□□□□□ -0.54
TRAPPC9-202ENST00000438773 NAGLUP54802 743 aa11.69□□□□□ -0.54
TRAPPC9-202ENST00000438773 POU4F1Q01851 419 aa11.69□□□□□ -0.54
TRAPPC9-202ENST00000438773 BST1Q10588 318 aa11.69□□□□□ -0.54
TRAPPC9-202ENST00000438773 BLMHQ13867 455 aa11.69□□□□□ -0.54
TRAPPC9-202ENST00000438773 SYTL3Q4VX76 610 aa11.69□□□□□ -0.54
TRAPPC9-202ENST00000438773 TRMT10BQ6PF06 316 aaKnown RBP11.69□□□□□ -0.54
TRAPPC9-202ENST00000438773 PQLC3Q8N755 202 aa11.69□□□□□ -0.54
TRAPPC9-202ENST00000438773 PLA2G4CQ9UP65 541 aa11.69□□□□□ -0.54
TRAPPC9-202ENST00000438773 CLUHO75153 1309 aa11.69□□□□□ -0.54
TRAPPC9-202ENST00000438773 MEI4A8MW99 385 aa11.69□□□□□ -0.54
TRAPPC9-202ENST00000438773 YBEYP58557 167 aaPredicted RBP11.69□□□□□ -0.54
TRAPPC9-202ENST00000438773 SLC1A5Q15758 541 aa11.69□□□□□ -0.54
TRAPPC9-202ENST00000438773 ADGRD1Q6QNK2 874 aa11.69□□□□□ -0.54
TRAPPC9-202ENST00000438773 RTL3Q8N8U3 475 aaKnown RBP11.69□□□□□ -0.54
TRAPPC9-202ENST00000438773 HDAC10Q969S8 669 aa11.69□□□□□ -0.54
TRAPPC9-202ENST00000438773 TBC1D10AQ9BXI6 508 aa11.69□□□□□ -0.54
TRAPPC9-202ENST00000438773 TAS2R13Q9NYV9 303 aa11.69□□□□□ -0.54
TRAPPC9-202ENST00000438773 AURKCQ9UQB9 309 aa11.69□□□□□ -0.54
TRAPPC9-202ENST00000438773 FAM50BQ9Y247 325 aa11.69□□□□□ -0.54
TRAPPC9-202ENST00000438773 C1RP00736 705 aa11.69□□□□□ -0.54
TRAPPC9-202ENST00000438773 ETS2P15036 469 aa11.69□□□□□ -0.54
TRAPPC9-202ENST00000438773 GPR15P49685 360 aa11.69□□□□□ -0.54
TRAPPC9-202ENST00000438773 CDK7P50613 346 aa11.69□□□□□ -0.54
TRAPPC9-202ENST00000438773 AFF1P51825 1210 aaKnown RBP11.69□□□□□ -0.54
TRAPPC9-202ENST00000438773 LBRQ14739 615 aaKnown RBP11.69□□□□□ -0.54
TRAPPC9-202ENST00000438773 TRIP4Q15650 581 aaPredicted RBP11.69□□□□□ -0.54
TRAPPC9-202ENST00000438773 SLC9A4Q6AI14 798 aa11.69□□□□□ -0.54
TRAPPC9-202ENST00000438773 IZUMO2Q6UXV1 221 aa11.69□□□□□ -0.54
TRAPPC9-202ENST00000438773 SLC41A1Q8IVJ1 513 aa11.69□□□□□ -0.54
TRAPPC9-202ENST00000438773 ACMSDQ8TDX5 336 aa11.69□□□□□ -0.54
TRAPPC9-202ENST00000438773 TEKT5Q96M29 485 aa11.69□□□□□ -0.54
TRAPPC9-202ENST00000438773 HAPLN3Q96S86 360 aa11.69□□□□□ -0.54
TRAPPC9-202ENST00000438773 MECRQ9BV79 373 aa11.69□□□□□ -0.54
TRAPPC9-202ENST00000438773 PHACTR1Q9C0D0 580 aa11.69□□□□□ -0.54
TRAPPC9-202ENST00000438773 VPS45Q9NRW7 570 aa11.69□□□□□ -0.54
TRAPPC9-202ENST00000438773 DDX18Q9NVP1 670 aaKnown RBP11.69□□□□□ -0.54
TRAPPC9-202ENST00000438773 NUMBLQ9Y6R0 609 aa11.69□□□□□ -0.54
TRAPPC9-202ENST00000438773 EVPLQ92817 2033 aa11.68□□□□□ -0.54
TRAPPC9-202ENST00000438773 LRRC37AA6NMS7 1700 aa11.68□□□□□ -0.54
TRAPPC9-202ENST00000438773 TRPC5OSA6NMA1 111 aa11.68□□□□□ -0.54
TRAPPC9-202ENST00000438773 FCHO1O14526 889 aa11.68□□□□□ -0.54
TRAPPC9-202ENST00000438773 GSTA4O15217 222 aa11.68□□□□□ -0.54
TRAPPC9-202ENST00000438773 H2AFYO75367 372 aaKnown RBP11.68□□□□□ -0.54
TRAPPC9-202ENST00000438773 CLDN11O75508 207 aa11.68□□□□□ -0.54
TRAPPC9-202ENST00000438773 IGSF6O95976 241 aa11.68□□□□□ -0.54
TRAPPC9-202ENST00000438773 ITGB6P18564 788 aa11.68□□□□□ -0.54
TRAPPC9-202ENST00000438773 HTR7P34969 479 aa11.68□□□□□ -0.54
TRAPPC9-202ENST00000438773 VHLP40337 213 aa11.68□□□□□ -0.54
TRAPPC9-202ENST00000438773 COPAP53621 1224 aa11.68□□□□□ -0.54
TRAPPC9-202ENST00000438773 SPDYAQ5MJ70 313 aa11.68□□□□□ -0.54
TRAPPC9-202ENST00000438773 ACBD5Q5T8D3 534 aaPredicted RBP11.68□□□□□ -0.54
TRAPPC9-202ENST00000438773 ANO7Q6IWH7 933 aa11.68□□□□□ -0.54
TRAPPC9-202ENST00000438773 TDRD5Q8NAT2 981 aaKnown RBP11.68□□□□□ -0.54
TRAPPC9-202ENST00000438773 NDNQ99608 321 aa11.68□□□□□ -0.54
TRAPPC9-202ENST00000438773 SLC39A8Q9C0K1 460 aa11.68□□□□□ -0.54
TRAPPC9-202ENST00000438773 CCDC90BQ9GZT6 254 aa11.68□□□□□ -0.54
TRAPPC9-202ENST00000438773 RNPEPL1Q9HAU8 725 aa11.68□□□□□ -0.54
TRAPPC9-202ENST00000438773 IL1RL2Q9HB29 575 aa11.68□□□□□ -0.54
TRAPPC9-202ENST00000438773 LGALS13Q9UHV8 139 aa11.68□□□□□ -0.54
TRAPPC9-202ENST00000438773 ENPP3O14638 875 aa11.68□□□□□ -0.54
TRAPPC9-202ENST00000438773 MATN3O15232 486 aa11.68□□□□□ -0.54
TRAPPC9-202ENST00000438773 ACSL4O60488 711 aa11.68□□□□□ -0.54
TRAPPC9-202ENST00000438773 COL6A1P12109 1028 aa11.68□□□□□ -0.54
TRAPPC9-202ENST00000438773 MRPS35P82673 323 aaKnown RBP11.68□□□□□ -0.54
TRAPPC9-202ENST00000438773 SEMA5AQ13591 1074 aa11.68□□□□□ -0.54
TRAPPC9-202ENST00000438773 GALNT3Q14435 633 aa11.68□□□□□ -0.54
TRAPPC9-202ENST00000438773 RNF43Q68DV7 783 aa11.68□□□□□ -0.54
TRAPPC9-202ENST00000438773 OR7D4Q8NG98 312 aa11.68□□□□□ -0.54
TRAPPC9-202ENST00000438773 OXCT2Q9BYC2 517 aaPredicted RBP11.68□□□□□ -0.54
TRAPPC9-202ENST00000438773 MRPL1Q9BYD6 325 aaKnown RBP11.68□□□□□ -0.54
TRAPPC9-202ENST00000438773 SNX15Q9NRS6 342 aa11.68□□□□□ -0.54
TRAPPC9-202ENST00000438773 AGO1Q9UL18 857 aaKnown RBP11.68□□□□□ -0.54
TRAPPC9-202ENST00000438773 MFHAS1Q9Y4C4 1052 aa11.68□□□□□ -0.54
TRAPPC9-202ENST00000438773 SLC38A8A6NNN8 435 aa11.68□□□□□ -0.54
TRAPPC9-202ENST00000438773 ANGPT2O15123 496 aa11.68□□□□□ -0.54
TRAPPC9-202ENST00000438773 PDE5AO76074 875 aa11.68□□□□□ -0.54
TRAPPC9-202ENST00000438773 TPBGLP0DKB5 382 aa11.68□□□□□ -0.54
TRAPPC9-202ENST00000438773 CACNA2D1P54289 1103 aa11.68□□□□□ -0.54
TRAPPC9-202ENST00000438773 SGO1Q5FBB7 561 aa11.68□□□□□ -0.54
TRAPPC9-202ENST00000438773 PLPP4Q5VZY2 271 aa11.68□□□□□ -0.54
TRAPPC9-202ENST00000438773 HJURPQ8NCD3 748 aaPredicted RBP11.68□□□□□ -0.54
TRAPPC9-202ENST00000438773 PXYLP1Q8TE99 480 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms