RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 RPS21P63220 83 aaKnown RBP25.07■■□□□ 1.6
RAPGEF1-206ENST00000438647 OVGP1Q12889 678 aa25.07■■□□□ 1.6
RAPGEF1-206ENST00000438647 IQCHQ86VS3 1027 aa25.07■■□□□ 1.6
RAPGEF1-206ENST00000438647 MAP7D3Q8IWC1 876 aa25.07■■□□□ 1.6
RAPGEF1-206ENST00000438647 TC2NQ8N9U0 490 aa25.07■■□□□ 1.6
RAPGEF1-206ENST00000438647 MFSD2AQ8NA29 543 aa25.07■■□□□ 1.6
RAPGEF1-206ENST00000438647 SLC35G2Q8TBE7 412 aa25.07■■□□□ 1.6
RAPGEF1-206ENST00000438647 FAM71BQ8TC56 605 aa25.07■■□□□ 1.6
RAPGEF1-206ENST00000438647 TSC1Q92574 1164 aa25.07■■□□□ 1.6
RAPGEF1-206ENST00000438647 FEM1CQ96JP0 617 aa25.07■■□□□ 1.6
RAPGEF1-206ENST00000438647 EXOC2Q96KP1 924 aa25.07■■□□□ 1.6
RAPGEF1-206ENST00000438647 KLHL32Q96NJ5 620 aa25.07■■□□□ 1.6
RAPGEF1-206ENST00000438647 IL21RQ9HBE5 538 aa25.07■■□□□ 1.6
RAPGEF1-206ENST00000438647 FNDC3AQ9Y2H6 1198 aaKnown RBP25.07■■□□□ 1.6
RAPGEF1-206ENST00000438647 PCDHGB2Q9Y5G2 931 aa25.07■■□□□ 1.6
RAPGEF1-206ENST00000438647 NCOR2Q9Y618 2525 aa25.06■■□□□ 1.6
RAPGEF1-206ENST00000438647 A0A1W2PR77 199 aa25.06■■□□□ 1.6
RAPGEF1-206ENST00000438647 GJC1P36383 396 aa25.06■■□□□ 1.6
RAPGEF1-206ENST00000438647 ARHGAP25P42331 645 aa25.06■■□□□ 1.6
RAPGEF1-206ENST00000438647 SUZ12Q15022 739 aaKnown RBP25.06■■□□□ 1.6
RAPGEF1-206ENST00000438647 ZNF423Q2M1K9 1284 aa25.06■■□□□ 1.6
RAPGEF1-206ENST00000438647 NETO2Q8NC67 525 aa25.06■■□□□ 1.6
RAPGEF1-206ENST00000438647 RFFLQ8WZ73 363 aa25.06■■□□□ 1.6
RAPGEF1-206ENST00000438647 ZNF599Q96NL3 588 aa25.06■■□□□ 1.6
RAPGEF1-206ENST00000438647 CINPQ9BW66 212 aaPredicted RBP25.06■■□□□ 1.6
RAPGEF1-206ENST00000438647 GDF3Q9NR23 364 aa25.06■■□□□ 1.6
RAPGEF1-206ENST00000438647 DKK3Q9UBP4 350 aa25.06■■□□□ 1.6
RAPGEF1-206ENST00000438647 TLR4O00206 839 aa25.05■■□□□ 1.6
RAPGEF1-206ENST00000438647 NEMP1O14524 444 aa25.05■■□□□ 1.6
RAPGEF1-206ENST00000438647 GIPC1O14908 333 aa25.05■■□□□ 1.6
RAPGEF1-206ENST00000438647 TSPAN6O43657 245 aa25.05■■□□□ 1.6
RAPGEF1-206ENST00000438647 WNT1P04628 370 aa25.05■■□□□ 1.6
RAPGEF1-206ENST00000438647 HNRNPA2B1P22626 353 aaKnown RBP25.05■■□□□ 1.6
RAPGEF1-206ENST00000438647 AKT2P31751 481 aa25.05■■□□□ 1.6
RAPGEF1-206ENST00000438647 CCT8P50990 548 aa25.05■■□□□ 1.6
RAPGEF1-206ENST00000438647 MESDQ14696 234 aa25.05■■□□□ 1.6
RAPGEF1-206ENST00000438647 PDK2Q15119 407 aa25.05■■□□□ 1.6
RAPGEF1-206ENST00000438647 ZNF284Q2VY69 593 aa25.05■■□□□ 1.6
RAPGEF1-206ENST00000438647 N4BP2L1Q5TBK1 243 aaPredicted RBP25.05■■□□□ 1.6
RAPGEF1-206ENST00000438647 TMCO4Q5TGY1 634 aa25.05■■□□□ 1.6
RAPGEF1-206ENST00000438647 NAXDQ8IW45 347 aa25.05■■□□□ 1.6
RAPGEF1-206ENST00000438647 KCTD6Q8NC69 237 aa25.05■■□□□ 1.6
RAPGEF1-206ENST00000438647 ZNF670Q9BS34 389 aa25.05■■□□□ 1.6
RAPGEF1-206ENST00000438647 ETNK2Q9NVF9 386 aa25.05■■□□□ 1.6
RAPGEF1-206ENST00000438647 WNT9AO14904 365 aa25.04■■□□□ 1.6
RAPGEF1-206ENST00000438647 SLC31A1O15431 190 aa25.04■■□□□ 1.6
RAPGEF1-206ENST00000438647 MTA2O94776 668 aa25.04■■□□□ 1.6
RAPGEF1-206ENST00000438647 CSNK1DP48730 415 aa25.04■■□□□ 1.6
RAPGEF1-206ENST00000438647 RENBPP51606 427 aa25.04■■□□□ 1.6
RAPGEF1-206ENST00000438647 TMEM259Q4ZIN3 620 aa25.04■■□□□ 1.6
RAPGEF1-206ENST00000438647 ZFYVE27Q5T4F4 411 aa25.04■■□□□ 1.6
RAPGEF1-206ENST00000438647 ARHGAP36Q6ZRI8 547 aa25.04■■□□□ 1.6
RAPGEF1-206ENST00000438647 TTC7BQ86TV6 843 aa25.04■■□□□ 1.6
RAPGEF1-206ENST00000438647 LRRC49Q8IUZ0 686 aa25.04■■□□□ 1.6
RAPGEF1-206ENST00000438647 CCDC170Q8IYT3 715 aa25.04■■□□□ 1.6
RAPGEF1-206ENST00000438647 OXR1Q8N573 874 aa25.04■■□□□ 1.6
RAPGEF1-206ENST00000438647 ATPAF2Q8N5M1 289 aa25.04■■□□□ 1.6
RAPGEF1-206ENST00000438647 HCAR2Q8TDS4 363 aa25.04■■□□□ 1.6
RAPGEF1-206ENST00000438647 VOPP1Q96AW1 172 aa25.04■■□□□ 1.6
RAPGEF1-206ENST00000438647 TUBGCP5Q96RT8 1024 aa25.04■■□□□ 1.6
RAPGEF1-206ENST00000438647 CALN1Q9BXU9 219 aa25.04■■□□□ 1.6
RAPGEF1-206ENST00000438647 SEPT3Q9UH03 358 aa25.04■■□□□ 1.6
RAPGEF1-206ENST00000438647 ZFR2Q9UPR6 939 aaKnown RBP25.04■■□□□ 1.6
RAPGEF1-206ENST00000438647 PCDHB9Q9Y5E1 797 aa25.04■■□□□ 1.6
RAPGEF1-206ENST00000438647 TMEM110-MUSTN1A8MSY1 372 aa25.03■■□□□ 1.6
RAPGEF1-206ENST00000438647 H0Y8X5 98 aa25.03■■□□□ 1.6
RAPGEF1-206ENST00000438647 YKT6O15498 198 aa25.03■■□□□ 1.6
RAPGEF1-206ENST00000438647 FLRT2O43155 660 aa25.03■■□□□ 1.6
RAPGEF1-206ENST00000438647 SH3BP5O60239 455 aa25.03■■□□□ 1.6
RAPGEF1-206ENST00000438647 PRLRP16471 622 aa25.03■■□□□ 1.6
RAPGEF1-206ENST00000438647 IL4RP24394 825 aa25.03■■□□□ 1.6
RAPGEF1-206ENST00000438647 ABL2P42684 1182 aa25.03■■□□□ 1.6
RAPGEF1-206ENST00000438647 SUOXP51687 545 aa25.03■■□□□ 1.6
RAPGEF1-206ENST00000438647 ARSEP51690 589 aa25.03■■□□□ 1.6
RAPGEF1-206ENST00000438647 NXPH1P58417 271 aa25.03■■□□□ 1.6
RAPGEF1-206ENST00000438647 NSUN2Q08J23 767 aaKnown RBP eCLIP25.03■■□□□ 1.6
RAPGEF1-206ENST00000438647 DPYSL3Q14195 570 aa25.03■■□□□ 1.6
RAPGEF1-206ENST00000438647 CFAP58Q5T655 872 aa25.03■■□□□ 1.6
RAPGEF1-206ENST00000438647 SEL1L3Q68CR1 1132 aa25.03■■□□□ 1.6
RAPGEF1-206ENST00000438647 BBS5Q8N3I7 341 aa25.03■■□□□ 1.6
RAPGEF1-206ENST00000438647 TMEM145Q8NBT3 493 aa25.03■■□□□ 1.6
RAPGEF1-206ENST00000438647 TSEN2Q8NCE0 465 aaKnown RBP25.03■■□□□ 1.6
RAPGEF1-206ENST00000438647 FAM174AQ8TBP5 190 aa25.03■■□□□ 1.6
RAPGEF1-206ENST00000438647 NSMCE1Q8WV22 266 aa25.03■■□□□ 1.6
RAPGEF1-206ENST00000438647 KLK6Q92876 244 aa25.03■■□□□ 1.6
RAPGEF1-206ENST00000438647 ZNF641Q96N77 438 aaPredicted RBP25.03■■□□□ 1.6
RAPGEF1-206ENST00000438647 ELF4Q99607 663 aaPredicted RBP25.03■■□□□ 1.6
RAPGEF1-206ENST00000438647 SLC17A9Q9BYT1 436 aa25.03■■□□□ 1.6
RAPGEF1-206ENST00000438647 LUC7LQ9NQ29 371 aaKnown RBP25.03■■□□□ 1.6
RAPGEF1-206ENST00000438647 PCNX2A6NKB5 2137 aa25.02■■□□□ 1.6
RAPGEF1-206ENST00000438647 INSIG1O15503 277 aa25.02■■□□□ 1.6
RAPGEF1-206ENST00000438647 CD48P09326 243 aa25.02■■□□□ 1.6
RAPGEF1-206ENST00000438647 XPAP23025 273 aaPredicted RBP25.02■■□□□ 1.6
RAPGEF1-206ENST00000438647 TAS2R40P59535 323 aa25.02■■□□□ 1.6
RAPGEF1-206ENST00000438647 MMRN1Q13201 1228 aa25.02■■□□□ 1.6
RAPGEF1-206ENST00000438647 LBRQ14739 615 aaKnown RBP25.02■■□□□ 1.6
RAPGEF1-206ENST00000438647 ATP13A4Q4VNC1 1196 aa25.02■■□□□ 1.6
RAPGEF1-206ENST00000438647 CPNE8Q86YQ8 564 aa25.02■■□□□ 1.6
RAPGEF1-206ENST00000438647 TP53INP2Q8IXH6 220 aa25.02■■□□□ 1.6
RAPGEF1-206ENST00000438647 SETD7Q8WTS6 366 aaKnown RBP25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms