RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 FAM200BP0CF97 657 aa11.3□□□□□ -0.6
RTN4-211ENST00000438462 ZNF28P17035 718 aa11.3□□□□□ -0.6
RTN4-211ENST00000438462 ADORA2BP29275 332 aa11.3□□□□□ -0.6
RTN4-211ENST00000438462 DDIT3P35638 169 aa11.3□□□□□ -0.6
RTN4-211ENST00000438462 EIF4A3P38919 411 aaKnown RBP11.3□□□□□ -0.6
RTN4-211ENST00000438462 PTGIRP43119 386 aa11.3□□□□□ -0.6
RTN4-211ENST00000438462 VAMP7P51809 220 aa11.3□□□□□ -0.6
RTN4-211ENST00000438462 GTF2BQ00403 316 aa11.3□□□□□ -0.6
RTN4-211ENST00000438462 CENPCQ03188 943 aa11.3□□□□□ -0.6
RTN4-211ENST00000438462 DNM1Q05193 864 aaKnown RBP11.3□□□□□ -0.6
RTN4-211ENST00000438462 CCDC15Q0P6D6 951 aa11.3□□□□□ -0.6
RTN4-211ENST00000438462 RAPSNQ13702 412 aa11.3□□□□□ -0.6
RTN4-211ENST00000438462 WDR72Q3MJ13 1102 aa11.3□□□□□ -0.6
RTN4-211ENST00000438462 ACCSLQ4AC99 568 aa11.3□□□□□ -0.6
RTN4-211ENST00000438462 FAM133BQ5BKY9 247 aaKnown RBP11.3□□□□□ -0.6
RTN4-211ENST00000438462 OGFOD3Q6PK18 319 aa11.3□□□□□ -0.6
RTN4-211ENST00000438462 C6orf15Q6UXA7 325 aaPredicted RBP11.3□□□□□ -0.6
RTN4-211ENST00000438462 ERN2Q76MJ5 926 aaKnown RBP11.3□□□□□ -0.6
RTN4-211ENST00000438462 ACOT1Q86TX2 421 aa11.3□□□□□ -0.6
RTN4-211ENST00000438462 HJURPQ8NCD3 748 aaPredicted RBP11.3□□□□□ -0.6
RTN4-211ENST00000438462 FAM46DQ8NEK8 389 aa11.3□□□□□ -0.6
RTN4-211ENST00000438462 NOC3LQ8WTT2 800 aaKnown RBP11.3□□□□□ -0.6
RTN4-211ENST00000438462 MTFMTQ96DP5 389 aaKnown RBP11.3□□□□□ -0.6
RTN4-211ENST00000438462 TNIP3Q96KP6 325 aa11.3□□□□□ -0.6
RTN4-211ENST00000438462 SMAD5Q99717 465 aaKnown RBP11.3□□□□□ -0.6
RTN4-211ENST00000438462 ESYT1Q9BSJ8 1104 aa11.3□□□□□ -0.6
RTN4-211ENST00000438462 ZMYND15Q9H091 742 aa11.3□□□□□ -0.6
RTN4-211ENST00000438462 FAM49BQ9NUQ9 324 aa11.3□□□□□ -0.6
RTN4-211ENST00000438462 AJAP1Q9UKB5 411 aaPredicted RBP11.3□□□□□ -0.6
RTN4-211ENST00000438462 GOLGA8IPA6NC78 632 aa11.29□□□□□ -0.6
RTN4-211ENST00000438462 GOLGA8JA6NMD2 632 aa11.29□□□□□ -0.6
RTN4-211ENST00000438462 ZNF185O15231 689 aa11.29□□□□□ -0.6
RTN4-211ENST00000438462 RASGRP1O95267 797 aa11.29□□□□□ -0.6
RTN4-211ENST00000438462 FAM163BP0C2L3 166 aa11.29□□□□□ -0.6
RTN4-211ENST00000438462 ABL2P42684 1182 aa11.29□□□□□ -0.6
RTN4-211ENST00000438462 MAZP56270 477 aaKnown RBP11.29□□□□□ -0.6
RTN4-211ENST00000438462 RPS24P62847 133 aaKnown RBP11.29□□□□□ -0.6
RTN4-211ENST00000438462 CSNK1G2P78368 415 aa11.29□□□□□ -0.6
RTN4-211ENST00000438462 FOLH1Q04609 750 aa11.29□□□□□ -0.6
RTN4-211ENST00000438462 SGCGQ13326 291 aa11.29□□□□□ -0.6
RTN4-211ENST00000438462 IL10RAQ13651 578 aa11.29□□□□□ -0.6
RTN4-211ENST00000438462 CPLX2Q6PUV4 134 aaKnown RBP11.29□□□□□ -0.6
RTN4-211ENST00000438462 TMEM200AQ86VY9 491 aa11.29□□□□□ -0.6
RTN4-211ENST00000438462 FBXL16Q8N461 479 aa11.29□□□□□ -0.6
RTN4-211ENST00000438462 MYEOVQ96EZ4 313 aa11.29□□□□□ -0.6
RTN4-211ENST00000438462 STAMBPL1Q96FJ0 436 aa11.29□□□□□ -0.6
RTN4-211ENST00000438462 FIZ1Q96SL8 496 aa11.29□□□□□ -0.6
RTN4-211ENST00000438462 REEP2Q9BRK0 252 aa11.29□□□□□ -0.6
RTN4-211ENST00000438462 TMEM121Q9BTD3 319 aa11.29□□□□□ -0.6
RTN4-211ENST00000438462 SMYD3Q9H7B4 428 aa11.29□□□□□ -0.6
RTN4-211ENST00000438462 FBXO8Q9NRD0 319 aa11.29□□□□□ -0.6
RTN4-211ENST00000438462 TNFRSF10DQ9UBN6 386 aa11.29□□□□□ -0.6
RTN4-211ENST00000438462 MDC1Q14676 2089 aaKnown RBP11.29□□□□□ -0.6
RTN4-211ENST00000438462 CHD5Q8TDI0 1954 aa11.28□□□□□ -0.6
RTN4-211ENST00000438462 TYW5A2RUC4 315 aaKnown RBP11.28□□□□□ -0.6
RTN4-211ENST00000438462 IGLON5A6NGN9 336 aa11.28□□□□□ -0.6
RTN4-211ENST00000438462 RHPN2P1A8MT19 583 aa11.28□□□□□ -0.6
RTN4-211ENST00000438462 A8MU76 341 aa11.28□□□□□ -0.6
RTN4-211ENST00000438462 MSI1O43347 362 aaKnown RBP11.28□□□□□ -0.6
RTN4-211ENST00000438462 PHACTR2O75167 634 aa11.28□□□□□ -0.6
RTN4-211ENST00000438462 FAM13AO94988 1023 aa11.28□□□□□ -0.6
RTN4-211ENST00000438462 LY6G6DO95868 133 aa11.28□□□□□ -0.6
RTN4-211ENST00000438462 SLC12A3P55017 1021 aa11.28□□□□□ -0.6
RTN4-211ENST00000438462 EVCP57679 992 aa11.28□□□□□ -0.6
RTN4-211ENST00000438462 RPS18P62269 152 aaKnown RBP11.28□□□□□ -0.6
RTN4-211ENST00000438462 YPEL5P62699 121 aa11.28□□□□□ -0.6
RTN4-211ENST00000438462 PTK2Q05397 1052 aa11.28□□□□□ -0.6
RTN4-211ENST00000438462 STK3Q13188 491 aa11.28□□□□□ -0.6
RTN4-211ENST00000438462 NR1D2Q14995 579 aa11.28□□□□□ -0.6
RTN4-211ENST00000438462 POSTNQ15063 836 aa11.28□□□□□ -0.6
RTN4-211ENST00000438462 LYPLAL1Q5VWZ2 237 aa11.28□□□□□ -0.6
RTN4-211ENST00000438462 SPECC1LQ69YQ0 1117 aa11.28□□□□□ -0.6
RTN4-211ENST00000438462 MEX3BQ6ZN04 569 aaKnown RBP11.28□□□□□ -0.6
RTN4-211ENST00000438462 CUZD1Q86UP6 607 aa11.28□□□□□ -0.6
RTN4-211ENST00000438462 GRHL3Q8TE85 626 aa11.28□□□□□ -0.6
RTN4-211ENST00000438462 CT55Q8WUE5 264 aa11.28□□□□□ -0.6
RTN4-211ENST00000438462 JAKMIP1Q96N16 626 aaKnown RBP11.28□□□□□ -0.6
RTN4-211ENST00000438462 RUFY1Q96T51 708 aa11.28□□□□□ -0.6
RTN4-211ENST00000438462 DPEP2Q9H4A9 486 aa11.28□□□□□ -0.6
RTN4-211ENST00000438462 KCND2Q9NZV8 630 aa11.28□□□□□ -0.6
RTN4-211ENST00000438462 ODF2LQ9ULJ1 636 aa11.28□□□□□ -0.6
RTN4-211ENST00000438462 HBS1LQ9Y450 684 aaKnown RBP11.28□□□□□ -0.6
RTN4-211ENST00000438462 MEGF8Q7Z7M0 2845 aa11.28□□□□□ -0.6
RTN4-211ENST00000438462 INAFM1C9JVW0 142 aa11.27□□□□□ -0.61
RTN4-211ENST00000438462 POLR1CO15160 346 aaPredicted RBP11.27□□□□□ -0.61
RTN4-211ENST00000438462 IRAK2O43187 625 aa11.27□□□□□ -0.61
RTN4-211ENST00000438462 CDSNQ15517 529 aa11.27□□□□□ -0.61
RTN4-211ENST00000438462 ZRSR1Q15695 479 aaKnown RBP11.27□□□□□ -0.61
RTN4-211ENST00000438462 ZNF174Q15697 407 aa11.27□□□□□ -0.61
RTN4-211ENST00000438462 ARSHQ5FYA8 562 aa11.27□□□□□ -0.61
RTN4-211ENST00000438462 SNAP47Q5SQN1 464 aa11.27□□□□□ -0.61
RTN4-211ENST00000438462 KRT79Q5XKE5 535 aa11.27□□□□□ -0.61
RTN4-211ENST00000438462 XKRXQ6PP77 449 aa11.27□□□□□ -0.61
RTN4-211ENST00000438462 BLOC1S2Q6QNY1 142 aa11.27□□□□□ -0.61
RTN4-211ENST00000438462 TAF8Q7Z7C8 310 aa11.27□□□□□ -0.61
RTN4-211ENST00000438462 VPS36Q86VN1 386 aa11.27□□□□□ -0.61
RTN4-211ENST00000438462 SEC14L1Q92503 715 aa11.27□□□□□ -0.61
RTN4-211ENST00000438462 RBM15Q96T37 977 aaKnown RBP eCLIP11.27□□□□□ -0.614e-8■■■■■ 30.1
RTN4-211ENST00000438462 C1QTNF2Q9BXJ5 285 aa11.27□□□□□ -0.61
RTN4-211ENST00000438462 HDAC8Q9BY41 377 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms