RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 OR56A4Q8NGH8 313 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 CLEC4CQ8WTT0 213 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 GMLQ99445 158 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 AGAP2Q99490 1192 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 COLEC11Q9BWP8 271 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 XYLT2Q9H1B5 865 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 CLK4Q9HAZ1 481 aaKnown RBP6.75□□□□□ -1.33
CSDE1-205ENST00000438362 GOLGA2P5Q9HBQ8 144 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 PTPRHQ9HD43 1115 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 SIX4Q9UIU6 781 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 TMCO1Q9UM00 188 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 PTCH2Q9Y6C5 1203 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 COL1A2P08123 1366 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 MAN1A2O60476 641 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 LINGO3P0C6S8 592 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 NELFEP18615 380 aaKnown RBP6.75□□□□□ -1.33
CSDE1-205ENST00000438362 GNAZP19086 355 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 CD86P42081 329 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 SLC11A2P49281 568 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 SCNN1BP51168 640 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 CDH13P55290 713 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 WNT3AP56704 352 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 INTS6LQ5JSJ4 861 aaKnown RBP6.75□□□□□ -1.33
CSDE1-205ENST00000438362 CDCA2Q69YH5 1023 aaPredicted RBP6.75□□□□□ -1.33
CSDE1-205ENST00000438362 FAM45BPQ6NSW5 357 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 LRRC8DQ7L1W4 858 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 TLK2Q86UE8 772 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 LRRC49Q8IUZ0 686 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 HERC6Q8IVU3 1022 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 TMCO5AQ8N6Q1 288 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 PQLC3Q8N755 202 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 FAM47BQ8NA70 645 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 PPTC7Q8NI37 304 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 STAG3L4Q8TBR4 150 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 METTL6Q8TCB7 284 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 FAM45AQ8TCE6 357 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 MAGEE2Q8TD90 523 aaPredicted RBP6.75□□□□□ -1.33
CSDE1-205ENST00000438362 PPP1R13LQ8WUF5 828 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 LPGAT1Q92604 370 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 VPS33AQ96AX1 596 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 CDCA5Q96FF9 252 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 MAGED4Q96JG8 741 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 DACH2Q96NX9 599 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 MINDY3Q9H8M7 445 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 FZD10Q9ULW2 581 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 VWA7Q9Y334 891 aa6.75□□□□□ -1.33
CSDE1-205ENST00000438362 TAF1P21675 1872 aa6.74□□□□□ -1.33
CSDE1-205ENST00000438362 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.74□□□□□ -1.33
CSDE1-205ENST00000438362 C1orf232A0A0U1RR37 186 aa6.74□□□□□ -1.33
CSDE1-205ENST00000438362 KCNU1A8MYU2 1149 aa6.74□□□□□ -1.33
CSDE1-205ENST00000438362 PDHXO00330 501 aa6.74□□□□□ -1.33
CSDE1-205ENST00000438362 ZNF197O14709 1029 aa6.74□□□□□ -1.33
CSDE1-205ENST00000438362 C22orf31O95567 290 aa6.74□□□□□ -1.33
CSDE1-205ENST00000438362 TOP3BO95985 862 aaKnown RBP6.74□□□□□ -1.33
CSDE1-205ENST00000438362 HGFP14210 728 aa6.74□□□□□ -1.33
CSDE1-205ENST00000438362 ITGAXP20702 1163 aa6.74□□□□□ -1.33
CSDE1-205ENST00000438362 OR1E1P30953 314 aa6.74□□□□□ -1.33
CSDE1-205ENST00000438362 TRPC1P48995 793 aa6.74□□□□□ -1.33
CSDE1-205ENST00000438362 OXCT1P55809 520 aa6.74□□□□□ -1.33
CSDE1-205ENST00000438362 C21orf59P57076 290 aa6.74□□□□□ -1.33
CSDE1-205ENST00000438362 TRAF2Q12933 501 aa6.74□□□□□ -1.33
CSDE1-205ENST00000438362 BNIP2Q12982 314 aa6.74□□□□□ -1.33
CSDE1-205ENST00000438362 ZNF177Q13360 481 aaPredicted RBP6.74□□□□□ -1.33
CSDE1-205ENST00000438362 ADGRE1Q14246 886 aa6.74□□□□□ -1.33
CSDE1-205ENST00000438362 VEPH1Q14D04 833 aa6.74□□□□□ -1.33
CSDE1-205ENST00000438362 POLD3Q15054 466 aaPredicted RBP6.74□□□□□ -1.33
CSDE1-205ENST00000438362 SOWAHAQ2M3V2 549 aa6.74□□□□□ -1.33
CSDE1-205ENST00000438362 SLC9B1Q4ZJI4 515 aa6.74□□□□□ -1.33
CSDE1-205ENST00000438362 OLFML1Q6UWY5 402 aa6.74□□□□□ -1.33
CSDE1-205ENST00000438362 FRMD7Q6ZUT3 714 aa6.74□□□□□ -1.33
CSDE1-205ENST00000438362 OTOP3Q7RTS5 596 aa6.74□□□□□ -1.33
CSDE1-205ENST00000438362 PATL1Q86TB9 770 aaKnown RBP6.74□□□□□ -1.33
CSDE1-205ENST00000438362 SATL1Q86VE3 508 aa6.74□□□□□ -1.33
CSDE1-205ENST00000438362 HORMAD1Q86X24 394 aa6.74□□□□□ -1.33
CSDE1-205ENST00000438362 MYO1HQ8N1T3 1032 aa6.74□□□□□ -1.33
CSDE1-205ENST00000438362 FSTL5Q8N475 847 aaPredicted RBP6.74□□□□□ -1.33
CSDE1-205ENST00000438362 TRPC4APQ8TEL6 797 aa6.74□□□□□ -1.33
CSDE1-205ENST00000438362 TMEM174Q8WUU8 243 aa6.74□□□□□ -1.33
CSDE1-205ENST00000438362 CIB1Q99828 191 aa6.74□□□□□ -1.33
CSDE1-205ENST00000438362 FBXO44Q9H4M3 255 aa6.74□□□□□ -1.33
CSDE1-205ENST00000438362 USP29Q9HBJ7 922 aa6.74□□□□□ -1.33
CSDE1-205ENST00000438362 SEMA4BQ9NPR2 832 aaPredicted RBP6.74□□□□□ -1.33
CSDE1-205ENST00000438362 FAM50BQ9Y247 325 aa6.74□□□□□ -1.33
CSDE1-205ENST00000438362 TTLL13PA6NNM8 815 aa6.74□□□□□ -1.33
CSDE1-205ENST00000438362 BTN3A1O00481 513 aa6.74□□□□□ -1.33
CSDE1-205ENST00000438362 LGR5O75473 907 aa6.74□□□□□ -1.33
CSDE1-205ENST00000438362 TIPRLO75663 272 aa6.74□□□□□ -1.33
CSDE1-205ENST00000438362 IPO13O94829 963 aaKnown RBP6.74□□□□□ -1.33
CSDE1-205ENST00000438362 ATG7O95352 703 aa6.74□□□□□ -1.33
CSDE1-205ENST00000438362 CHRNGP07510 517 aa6.74□□□□□ -1.33
CSDE1-205ENST00000438362 SMIM10L2AP0DMW4 78 aa6.74□□□□□ -1.33
CSDE1-205ENST00000438362 SMIM10L2BP0DMW5 78 aa6.74□□□□□ -1.33
CSDE1-205ENST00000438362 DARSP14868 501 aaKnown RBP6.74□□□□□ -1.33
CSDE1-205ENST00000438362 TKTP29401 623 aaKnown RBP6.74□□□□□ -1.33
CSDE1-205ENST00000438362 POLD2P49005 469 aa6.74□□□□□ -1.33
CSDE1-205ENST00000438362 GLUD2P49448 558 aa6.74□□□□□ -1.33
CSDE1-205ENST00000438362 CCNG1P51959 295 aa6.74□□□□□ -1.33
CSDE1-205ENST00000438362 ZNF280AP59817 542 aaPredicted RBP6.74□□□□□ -1.33
CSDE1-205ENST00000438362 RALGDSQ12967 914 aa6.74□□□□□ -1.33
CSDE1-205ENST00000438362 PPIL2Q13356 520 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms