RNA–Protein interactions for RNA: ENST00000437036.6

SKA2-202, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 625 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-202ENST00000437036 TMEM121Q9BTD3 319 aa14.91□□□□□ -0.02
SKA2-202ENST00000437036 FAM126AQ9BYI3 521 aaPredicted RBP14.91□□□□□ -0.02
SKA2-202ENST00000437036 CEP41Q9BYV8 373 aa14.91□□□□□ -0.02
SKA2-202ENST00000437036 MKRN2Q9H000 416 aaKnown RBP14.91□□□□□ -0.02
SKA2-202ENST00000437036 C10orf88Q9H8K7 445 aa14.91□□□□□ -0.02
SKA2-202ENST00000437036 USP29Q9HBJ7 922 aa14.91□□□□□ -0.02
SKA2-202ENST00000437036 GLOD4Q9HC38 313 aa14.91□□□□□ -0.02
SKA2-202ENST00000437036 SMARCAL1Q9NZC9 954 aa14.91□□□□□ -0.02
SKA2-202ENST00000437036 NCKAP1Q9Y2A7 1128 aa14.91□□□□□ -0.02
SKA2-202ENST00000437036 CUL9Q8IWT3 2517 aa14.9□□□□□ -0.02
SKA2-202ENST00000437036 CCDC163A0A0D9SF12 145 aa14.9□□□□□ -0.02
SKA2-202ENST00000437036 A0A1W2PQ67 120 aa14.9□□□□□ -0.02
SKA2-202ENST00000437036 C5orf60A6NFR6 353 aa14.9□□□□□ -0.02
SKA2-202ENST00000437036 AXIN1O15169 862 aa14.9□□□□□ -0.02
SKA2-202ENST00000437036 GALR2O43603 387 aaPredicted RBP14.9□□□□□ -0.02
SKA2-202ENST00000437036 OPHN1O60890 802 aa14.9□□□□□ -0.02
SKA2-202ENST00000437036 PHF2O75151 1096 aa14.9□□□□□ -0.02
SKA2-202ENST00000437036 ZNF217O75362 1048 aa14.9□□□□□ -0.02
SKA2-202ENST00000437036 LEFTY1O75610 366 aa14.9□□□□□ -0.02
SKA2-202ENST00000437036 SERPINF2P08697 491 aa14.9□□□□□ -0.02
SKA2-202ENST00000437036 CR2P20023 1033 aa14.9□□□□□ -0.02
SKA2-202ENST00000437036 RGRP47804 291 aa14.9□□□□□ -0.02
SKA2-202ENST00000437036 CKAP4Q07065 602 aaKnown RBP14.9□□□□□ -0.02
SKA2-202ENST00000437036 CYP1B1Q16678 543 aa14.9□□□□□ -0.02
SKA2-202ENST00000437036 ALG1LQ6GMV1 187 aa14.9□□□□□ -0.02
SKA2-202ENST00000437036 NCEH1Q6PIU2 408 aa14.9□□□□□ -0.02
SKA2-202ENST00000437036 GDPD4Q6W3E5 623 aa14.9□□□□□ -0.02
SKA2-202ENST00000437036 ARHGEF18Q6ZSZ5 1173 aa14.9□□□□□ -0.02
SKA2-202ENST00000437036 RASSF3Q86WH2 238 aa14.9□□□□□ -0.02
SKA2-202ENST00000437036 ZNF567Q8N184 647 aa14.9□□□□□ -0.02
SKA2-202ENST00000437036 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.9□□□□□ -0.02
SKA2-202ENST00000437036 CNTD1Q8N815 330 aa14.9□□□□□ -0.02
SKA2-202ENST00000437036 CCDC89Q8N998 374 aa14.9□□□□□ -0.02
SKA2-202ENST00000437036 C12orf50Q8NA57 414 aaPredicted RBP14.9□□□□□ -0.02
SKA2-202ENST00000437036 MDGA1Q8NFP4 955 aa14.9□□□□□ -0.02
SKA2-202ENST00000437036 ATL2Q8NHH9 583 aa14.9□□□□□ -0.02
SKA2-202ENST00000437036 ZNF641Q96N77 438 aaPredicted RBP14.9□□□□□ -0.02
SKA2-202ENST00000437036 SPATA13Q96N96 652 aa14.9□□□□□ -0.02
SKA2-202ENST00000437036 PPP1R2P1Q96PQ5 205 aa14.9□□□□□ -0.02
SKA2-202ENST00000437036 OMDQ99983 421 aa14.9□□□□□ -0.02
SKA2-202ENST00000437036 SLC25A51Q9H1U9 297 aa14.9□□□□□ -0.02
SKA2-202ENST00000437036 PABPC3Q9H361 631 aaKnown RBP14.9□□□□□ -0.02
SKA2-202ENST00000437036 NOD2Q9HC29 1040 aa14.9□□□□□ -0.02
SKA2-202ENST00000437036 RSPH14Q9UHP6 348 aa14.9□□□□□ -0.02
SKA2-202ENST00000437036 CDC23Q9UJX2 597 aa14.9□□□□□ -0.02
SKA2-202ENST00000437036 WASF2Q9Y6W5 498 aa14.9□□□□□ -0.02
SKA2-202ENST00000437036 ESPNB1AK53 854 aa14.89□□□□□ -0.03
SKA2-202ENST00000437036 CCDC188H7C350 402 aa14.89□□□□□ -0.03
SKA2-202ENST00000437036 MID1O15344 667 aa14.89□□□□□ -0.03
SKA2-202ENST00000437036 SOCS5O75159 536 aa14.89□□□□□ -0.03
SKA2-202ENST00000437036 GCATO75600 419 aa14.89□□□□□ -0.03
SKA2-202ENST00000437036 IFNB1P01574 187 aa14.89□□□□□ -0.03
SKA2-202ENST00000437036 UGT2B4P06133 528 aa14.89□□□□□ -0.03
SKA2-202ENST00000437036 C7P10643 843 aa14.89□□□□□ -0.03
SKA2-202ENST00000437036 COILP38432 576 aaPredicted RBP14.89□□□□□ -0.03
SKA2-202ENST00000437036 TNNT3P45378 269 aaPredicted RBP14.89□□□□□ -0.03
SKA2-202ENST00000437036 FNTAP49354 379 aa14.89□□□□□ -0.03
SKA2-202ENST00000437036 DSC2Q02487 901 aa14.89□□□□□ -0.03
SKA2-202ENST00000437036 PRPSAP1Q14558 356 aa14.89□□□□□ -0.03
SKA2-202ENST00000437036 ANGPT1Q15389 498 aa14.89□□□□□ -0.03
SKA2-202ENST00000437036 ZNF528Q3MIS6 628 aa14.89□□□□□ -0.03
SKA2-202ENST00000437036 USP39Q53GS9 565 aaKnown RBP14.89□□□□□ -0.03
SKA2-202ENST00000437036 ZNF805Q5CZA5 627 aa14.89□□□□□ -0.03
SKA2-202ENST00000437036 ANKRD20A2Q5SQ80 823 aa14.89□□□□□ -0.03
SKA2-202ENST00000437036 ANKRD20A1Q5TYW2 823 aa14.89□□□□□ -0.03
SKA2-202ENST00000437036 ANKRD20A3Q5VUR7 823 aa14.89□□□□□ -0.03
SKA2-202ENST00000437036 KBTBD6Q86V97 674 aa14.89□□□□□ -0.03
SKA2-202ENST00000437036 CACUL1Q86Y37 369 aa14.89□□□□□ -0.03
SKA2-202ENST00000437036 HCAR2Q8TDS4 363 aa14.89□□□□□ -0.03
SKA2-202ENST00000437036 GRK7Q8WTQ7 553 aa14.89□□□□□ -0.03
SKA2-202ENST00000437036 LRRC45Q96CN5 670 aa14.89□□□□□ -0.03
SKA2-202ENST00000437036 RUNDC3BQ96NL0 473 aa14.89□□□□□ -0.03
SKA2-202ENST00000437036 SLC6A17Q9H1V8 727 aa14.89□□□□□ -0.03
SKA2-202ENST00000437036 SUV39H2Q9H5I1 410 aa14.89□□□□□ -0.03
SKA2-202ENST00000437036 SHROOM3Q8TF72 1996 aa14.89□□□□□ -0.03
SKA2-202ENST00000437036 CKAP5Q14008 2032 aa14.88□□□□□ -0.03
SKA2-202ENST00000437036 GOLGA6CA6NDK9 693 aa14.88□□□□□ -0.03
SKA2-202ENST00000437036 GOLGA6BA6NDN3 693 aa14.88□□□□□ -0.03
SKA2-202ENST00000437036 ZNF500O60304 480 aaPredicted RBP14.88□□□□□ -0.03
SKA2-202ENST00000437036 CTSLP07711 333 aa14.88□□□□□ -0.03
SKA2-202ENST00000437036 GOLGA6DP0CG33 693 aa14.88□□□□□ -0.03
SKA2-202ENST00000437036 XPAP23025 273 aaPredicted RBP14.88□□□□□ -0.03
SKA2-202ENST00000437036 NFKBIAP25963 317 aa14.88□□□□□ -0.03
SKA2-202ENST00000437036 ITGB7P26010 798 aa14.88□□□□□ -0.03
SKA2-202ENST00000437036 OXTRP30559 389 aa14.88□□□□□ -0.03
SKA2-202ENST00000437036 GKP32189 559 aa14.88□□□□□ -0.03
SKA2-202ENST00000437036 PXNP49023 591 aaPredicted RBP14.88□□□□□ -0.03
SKA2-202ENST00000437036 WHAMMP3Q1A5X7 153 aa14.88□□□□□ -0.03
SKA2-202ENST00000437036 P3H1Q32P28 736 aa14.88□□□□□ -0.03
SKA2-202ENST00000437036 POM121L1PQ3SYA9 428 aa14.88□□□□□ -0.03
SKA2-202ENST00000437036 CCDC137Q6PK04 289 aaKnown RBP14.88□□□□□ -0.03
SKA2-202ENST00000437036 TSSK4Q6SA08 328 aa14.88□□□□□ -0.03
SKA2-202ENST00000437036 C4orf22Q6V702 233 aa14.88□□□□□ -0.03
SKA2-202ENST00000437036 USP30Q70CQ3 517 aa14.88□□□□□ -0.03
SKA2-202ENST00000437036 WDR5BQ86VZ2 330 aa14.88□□□□□ -0.03
SKA2-202ENST00000437036 LONP2Q86WA8 852 aa14.88□□□□□ -0.03
SKA2-202ENST00000437036 CAMK1DQ8IU85 385 aa14.88□□□□□ -0.03
SKA2-202ENST00000437036 MAML2Q8IZL2 1156 aaPredicted RBP14.88□□□□□ -0.03
SKA2-202ENST00000437036 HDDC3Q8N4P3 179 aa14.88□□□□□ -0.03
SKA2-202ENST00000437036 CCDC110Q8TBZ0 833 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms