RNA–Protein interactions for RNA: ENST00000435218.6

TMEM40-204, Transcript of transmembrane protein 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM40, Length 1,547 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40-204ENST00000435218 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.27■□□□□ 0.04
TMEM40-204ENST00000435218 MAGEB16A2A368 324 aa15.27■□□□□ 0.03
TMEM40-204ENST00000435218 GRXCR2A6NFK2 248 aa15.27■□□□□ 0.03
TMEM40-204ENST00000435218 OTOL1A6NHN0 477 aaPredicted RBP15.27■□□□□ 0.03
TMEM40-204ENST00000435218 MBTPS2O43462 519 aa15.27■□□□□ 0.03
TMEM40-204ENST00000435218 ZNF821O75541 412 aaPredicted RBP15.27■□□□□ 0.03
TMEM40-204ENST00000435218 CPP00450 1065 aa15.27■□□□□ 0.03
TMEM40-204ENST00000435218 AGTP01019 485 aa15.27■□□□□ 0.03
TMEM40-204ENST00000435218 SRPRAP08240 638 aaKnown RBP15.27■□□□□ 0.03
TMEM40-204ENST00000435218 POLR2EP19388 210 aaKnown RBP15.27■□□□□ 0.03
TMEM40-204ENST00000435218 HLA-DPA1P20036 260 aa15.27■□□□□ 0.03
TMEM40-204ENST00000435218 MGAT1P26572 445 aa15.27■□□□□ 0.03
TMEM40-204ENST00000435218 MAPK8P45983 427 aa15.27■□□□□ 0.03
TMEM40-204ENST00000435218 SCNN1BP51168 640 aa15.27■□□□□ 0.03
TMEM40-204ENST00000435218 AP1S1P61966 158 aa15.27■□□□□ 0.03
TMEM40-204ENST00000435218 ZNF844Q08AG5 666 aa15.27■□□□□ 0.03
TMEM40-204ENST00000435218 GPS2Q13227 327 aa15.27■□□□□ 0.03
TMEM40-204ENST00000435218 MTM1Q13496 603 aa15.27■□□□□ 0.03
TMEM40-204ENST00000435218 STAT4Q14765 748 aa15.27■□□□□ 0.03
TMEM40-204ENST00000435218 SLC1A5Q15758 541 aa15.27■□□□□ 0.03
TMEM40-204ENST00000435218 GEN1Q17RS7 908 aa15.27■□□□□ 0.03
TMEM40-204ENST00000435218 HP1BP3Q5SSJ5 553 aaPredicted RBP15.27■□□□□ 0.03
TMEM40-204ENST00000435218 TMEM215Q68D42 235 aa15.27■□□□□ 0.03
TMEM40-204ENST00000435218 NCEH1Q6PIU2 408 aa15.27■□□□□ 0.03
TMEM40-204ENST00000435218 C12orf40Q86WS4 652 aa15.27■□□□□ 0.03
TMEM40-204ENST00000435218 PLPP6Q8IY26 295 aa15.27■□□□□ 0.03
TMEM40-204ENST00000435218 MPP5Q8N3R9 675 aa15.27■□□□□ 0.03
TMEM40-204ENST00000435218 PHTF2Q8N3S3 785 aa15.27■□□□□ 0.03
TMEM40-204ENST00000435218 PCDH20Q8N6Y1 951 aaKnown RBP15.27■□□□□ 0.03
TMEM40-204ENST00000435218 NAT16Q8N8M0 369 aa15.27■□□□□ 0.03
TMEM40-204ENST00000435218 PTCD2Q8WV60 388 aaKnown RBP15.27■□□□□ 0.03
TMEM40-204ENST00000435218 TRIB3Q96RU7 358 aa15.27■□□□□ 0.03
TMEM40-204ENST00000435218 TRMT61BQ9BVS5 477 aaKnown RBP15.27■□□□□ 0.03
TMEM40-204ENST00000435218 PPCSQ9HAB8 311 aa15.27■□□□□ 0.03
TMEM40-204ENST00000435218 MED4Q9NPJ6 270 aa15.27■□□□□ 0.03
TMEM40-204ENST00000435218 SYBUQ9NX95 663 aa15.27■□□□□ 0.03
TMEM40-204ENST00000435218 FCF1Q9Y324 198 aaKnown RBP15.27■□□□□ 0.03
TMEM40-204ENST00000435218 ZNF106Q9H2Y7 1883 aaKnown RBP15.26■□□□□ 0.03
TMEM40-204ENST00000435218 TCF20Q9UGU0 1960 aaKnown RBP15.26■□□□□ 0.03
TMEM40-204ENST00000435218 SCN8AQ9UQD0 1980 aa15.26■□□□□ 0.03
TMEM40-204ENST00000435218 XIRP2A4UGR9 3374 aa15.26■□□□□ 0.03
TMEM40-204ENST00000435218 H3BQ06 376 aaPredicted RBP15.26■□□□□ 0.03
TMEM40-204ENST00000435218 SMAD6O43541 496 aaKnown RBP15.26■□□□□ 0.03
TMEM40-204ENST00000435218 OPA1O60313 960 aa15.26■□□□□ 0.03
TMEM40-204ENST00000435218 GSRP00390 522 aa15.26■□□□□ 0.03
TMEM40-204ENST00000435218 SHBGP04278 402 aa15.26■□□□□ 0.03
TMEM40-204ENST00000435218 FGF1P05230 155 aa15.26■□□□□ 0.03
TMEM40-204ENST00000435218 PGAM1P18669 254 aa15.26■□□□□ 0.03
TMEM40-204ENST00000435218 SSTR1P30872 391 aa15.26■□□□□ 0.03
TMEM40-204ENST00000435218 CTSOP43234 321 aaPredicted RBP15.26■□□□□ 0.03
TMEM40-204ENST00000435218 SESN2P58004 480 aaPredicted RBP15.26■□□□□ 0.03
TMEM40-204ENST00000435218 CDK18Q07002 472 aa15.26■□□□□ 0.03
TMEM40-204ENST00000435218 FRG1Q14331 258 aaKnown RBP15.26■□□□□ 0.03
TMEM40-204ENST00000435218 GRM2Q14416 872 aa15.26■□□□□ 0.03
TMEM40-204ENST00000435218 EIF4HQ15056 248 aaKnown RBP15.26■□□□□ 0.03
TMEM40-204ENST00000435218 GRAMD4Q6IC98 578 aa15.26■□□□□ 0.03
TMEM40-204ENST00000435218 C22orf39Q6P5X5 142 aa15.26■□□□□ 0.03
TMEM40-204ENST00000435218 C3orf62Q6ZUJ4 267 aa15.26■□□□□ 0.03
TMEM40-204ENST00000435218 SRLQ86TD4 932 aa15.26■□□□□ 0.03
TMEM40-204ENST00000435218 TMEM135Q86UB9 458 aa15.26■□□□□ 0.03
TMEM40-204ENST00000435218 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.26■□□□□ 0.03
TMEM40-204ENST00000435218 EXOC2Q96KP1 924 aa15.26■□□□□ 0.03
TMEM40-204ENST00000435218 RANBP9Q96S59 729 aa15.26■□□□□ 0.03
TMEM40-204ENST00000435218 CDX2Q99626 313 aaPredicted RBP15.26■□□□□ 0.03
TMEM40-204ENST00000435218 CCDC77Q9BR77 488 aa15.26■□□□□ 0.03
TMEM40-204ENST00000435218 TDRD1Q9BXT4 1180 aaKnown RBP15.26■□□□□ 0.03
TMEM40-204ENST00000435218 ACSS3Q9H6R3 686 aa15.26■□□□□ 0.03
TMEM40-204ENST00000435218 MRM3Q9HC36 420 aaKnown RBP15.26■□□□□ 0.03
TMEM40-204ENST00000435218 DEC1Q9P2X7 70 aa15.26■□□□□ 0.03
TMEM40-204ENST00000435218 SOX13Q9UN79 622 aa15.26■□□□□ 0.03
TMEM40-204ENST00000435218 ERVW-1Q9UQF0 538 aa15.26■□□□□ 0.03
TMEM40-204ENST00000435218 NUMBLQ9Y6R0 609 aa15.26■□□□□ 0.03
TMEM40-204ENST00000435218 MYO10Q9HD67 2058 aa15.25■□□□□ 0.03
TMEM40-204ENST00000435218 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.25■□□□□ 0.03
TMEM40-204ENST00000435218 FAM237BA0A1B0GVD1 139 aa15.25■□□□□ 0.03
TMEM40-204ENST00000435218 TTC24A2A3L6 582 aaPredicted RBP15.25■□□□□ 0.03
TMEM40-204ENST00000435218 K7ERQ8 282 aa15.25■□□□□ 0.03
TMEM40-204ENST00000435218 TRIM24O15164 1050 aa15.25■□□□□ 0.03
TMEM40-204ENST00000435218 TIMM44O43615 452 aa15.25■□□□□ 0.03
TMEM40-204ENST00000435218 ATP9BO43861 1147 aa15.25■□□□□ 0.03
TMEM40-204ENST00000435218 GJB3O75712 270 aa15.25■□□□□ 0.03
TMEM40-204ENST00000435218 IGSF6O95976 241 aa15.25■□□□□ 0.03
TMEM40-204ENST00000435218 ATP5BP06576 529 aaKnown RBP15.25■□□□□ 0.03
TMEM40-204ENST00000435218 ATXN1LP0C7T5 689 aaKnown RBP15.25■□□□□ 0.03
TMEM40-204ENST00000435218 CA4P22748 312 aa15.25■□□□□ 0.03
TMEM40-204ENST00000435218 GDI1P31150 447 aa15.25■□□□□ 0.03
TMEM40-204ENST00000435218 GJA4P35212 333 aa15.25■□□□□ 0.03
TMEM40-204ENST00000435218 IFFO1Q0D2I5 559 aa15.25■□□□□ 0.03
TMEM40-204ENST00000435218 MSLNQ13421 630 aaPredicted RBP15.25■□□□□ 0.03
TMEM40-204ENST00000435218 PCSK7Q16549 785 aa15.25■□□□□ 0.03
TMEM40-204ENST00000435218 ITPRIPL2Q3MIP1 535 aa15.25■□□□□ 0.03
TMEM40-204ENST00000435218 PREPLQ4J6C6 727 aaPredicted RBP15.25■□□□□ 0.03
TMEM40-204ENST00000435218 ZNF449Q6P9G9 518 aa15.25■□□□□ 0.03
TMEM40-204ENST00000435218 KDM1BQ8NB78 822 aa15.25■□□□□ 0.03
TMEM40-204ENST00000435218 OR2AP1Q8NGE2 309 aa15.25■□□□□ 0.03
TMEM40-204ENST00000435218 OR2W6PQ8NHA6 318 aa15.25■□□□□ 0.03
TMEM40-204ENST00000435218 GSDMBQ8TAX9 411 aa15.25■□□□□ 0.03
TMEM40-204ENST00000435218 MYLIPQ8WY64 445 aa15.25■□□□□ 0.03
TMEM40-204ENST00000435218 NXPE3Q969Y0 559 aa15.25■□□□□ 0.03
TMEM40-204ENST00000435218 IFT43Q96FT9 208 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms