RNA–Protein interactions for RNA: ENST00000433949.7

CTCFL-209, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-209ENST00000433949 TRIM33Q9UPN9 1127 aa12.09□□□□□ -0.47
CTCFL-209ENST00000433949 TCAF1Q9Y4C2 921 aa12.09□□□□□ -0.47
CTCFL-209ENST00000433949 SEC24AO95486 1093 aa12.09□□□□□ -0.47
CTCFL-209ENST00000433949 TOP3BO95985 862 aaKnown RBP12.09□□□□□ -0.47
CTCFL-209ENST00000433949 IGLV3-27P01718 113 aa12.09□□□□□ -0.47
CTCFL-209ENST00000433949 CTSAP10619 480 aa12.09□□□□□ -0.47
CTCFL-209ENST00000433949 COL6A2P12110 1019 aa12.09□□□□□ -0.47
CTCFL-209ENST00000433949 CPA3P15088 417 aa12.09□□□□□ -0.47
CTCFL-209ENST00000433949 C10orf120Q5SQS8 335 aa12.09□□□□□ -0.47
CTCFL-209ENST00000433949 MARC1Q5VT66 337 aa12.09□□□□□ -0.47
CTCFL-209ENST00000433949 ICE2Q659A1 982 aa12.09□□□□□ -0.47
CTCFL-209ENST00000433949 DENND5AQ6IQ26 1287 aa12.09□□□□□ -0.47
CTCFL-209ENST00000433949 C16orf46Q6P387 395 aa12.09□□□□□ -0.47
CTCFL-209ENST00000433949 CLEC14AQ86T13 490 aa12.09□□□□□ -0.47
CTCFL-209ENST00000433949 RDH11Q8TC12 318 aa12.09□□□□□ -0.47
CTCFL-209ENST00000433949 TBC1D10AQ9BXI6 508 aa12.09□□□□□ -0.47
CTCFL-209ENST00000433949 SLC28A3Q9HAS3 691 aa12.09□□□□□ -0.47
CTCFL-209ENST00000433949 MSRAQ9UJ68 235 aa12.09□□□□□ -0.47
CTCFL-209ENST00000433949 MAGED2Q9UNF1 606 aaPredicted RBP12.09□□□□□ -0.47
CTCFL-209ENST00000433949 BACE2Q9Y5Z0 518 aa12.09□□□□□ -0.47
CTCFL-209ENST00000433949 REV3LO60673 3130 aa12.09□□□□□ -0.47
CTCFL-209ENST00000433949 DRGXA6NNA5 263 aa12.08□□□□□ -0.48
CTCFL-209ENST00000433949 PER2O15055 1255 aa12.08□□□□□ -0.48
CTCFL-209ENST00000433949 SIN3BO75182 1162 aa12.08□□□□□ -0.48
CTCFL-209ENST00000433949 HAPLN1P10915 354 aaPredicted RBP12.08□□□□□ -0.48
CTCFL-209ENST00000433949 RALBP11234 206 aa12.08□□□□□ -0.48
CTCFL-209ENST00000433949 CCND1P24385 295 aa12.08□□□□□ -0.48
CTCFL-209ENST00000433949 PRKAA2P54646 552 aa12.08□□□□□ -0.48
CTCFL-209ENST00000433949 AQP5P55064 265 aa12.08□□□□□ -0.48
CTCFL-209ENST00000433949 YBEYP58557 167 aaPredicted RBP12.08□□□□□ -0.48
CTCFL-209ENST00000433949 IRX4P78413 519 aa12.08□□□□□ -0.48
CTCFL-209ENST00000433949 ILF2Q12905 390 aaKnown RBP12.08□□□□□ -0.48
CTCFL-209ENST00000433949 TAF10Q12962 218 aa12.08□□□□□ -0.48
CTCFL-209ENST00000433949 PARP15Q460N3 678 aa12.08□□□□□ -0.48
CTCFL-209ENST00000433949 PPM1JQ5JR12 505 aa12.08□□□□□ -0.48
CTCFL-209ENST00000433949 SWT1Q5T5J6 900 aaKnown RBP12.08□□□□□ -0.48
CTCFL-209ENST00000433949 KIAA0930Q6ICG6 404 aaPredicted RBP12.08□□□□□ -0.48
CTCFL-209ENST00000433949 CMC1Q7Z7K0 106 aa12.08□□□□□ -0.48
CTCFL-209ENST00000433949 ZC3HC1Q86WB0 502 aaKnown RBP12.08□□□□□ -0.48
CTCFL-209ENST00000433949 TDHQ8IZJ6 230 aa12.08□□□□□ -0.48
CTCFL-209ENST00000433949 ZNF461Q8TAF7 563 aa12.08□□□□□ -0.48
CTCFL-209ENST00000433949 CALML6Q8TD86 181 aa12.08□□□□□ -0.48
CTCFL-209ENST00000433949 ZNF419Q96HQ0 510 aaPredicted RBP12.08□□□□□ -0.48
CTCFL-209ENST00000433949 MRGPRX2Q96LB1 330 aa12.08□□□□□ -0.48
CTCFL-209ENST00000433949 FAM167BQ9BTA0 163 aa12.08□□□□□ -0.48
CTCFL-209ENST00000433949 NOL6Q9H6R4 1146 aaKnown RBP12.08□□□□□ -0.48
CTCFL-209ENST00000433949 SP110Q9HB58 689 aa12.08□□□□□ -0.48
CTCFL-209ENST00000433949 TLR9Q9NR96 1032 aa12.08□□□□□ -0.48
CTCFL-209ENST00000433949 FBXO6Q9NRD1 293 aaPredicted RBP12.08□□□□□ -0.48
CTCFL-209ENST00000433949 TLK1Q9UKI8 766 aa12.08□□□□□ -0.48
CTCFL-209ENST00000433949 KIAA1671Q9BY89 1806 aa12.07□□□□□ -0.48
CTCFL-209ENST00000433949 HEATR9A2RTY3 570 aa12.07□□□□□ -0.48
CTCFL-209ENST00000433949 FCHO1O14526 889 aa12.07□□□□□ -0.48
CTCFL-209ENST00000433949 PRRG1O14668 218 aa12.07□□□□□ -0.48
CTCFL-209ENST00000433949 C2P06681 752 aa12.07□□□□□ -0.48
CTCFL-209ENST00000433949 SERPINA6P08185 405 aa12.07□□□□□ -0.48
CTCFL-209ENST00000433949 ZDHHC11BP0C7U3 371 aa12.07□□□□□ -0.48
CTCFL-209ENST00000433949 MYL4P12829 197 aa12.07□□□□□ -0.48
CTCFL-209ENST00000433949 MAPKAPK2P49137 400 aa12.07□□□□□ -0.48
CTCFL-209ENST00000433949 CSRP3P50461 194 aa12.07□□□□□ -0.48
CTCFL-209ENST00000433949 GPM6BQ13491 265 aa12.07□□□□□ -0.48
CTCFL-209ENST00000433949 CAMK1Q14012 370 aa12.07□□□□□ -0.48
CTCFL-209ENST00000433949 POU6F1Q14863 301 aa12.07□□□□□ -0.48
CTCFL-209ENST00000433949 ZCCHC23Q6ZST2 131 aa12.07□□□□□ -0.48
CTCFL-209ENST00000433949 KIAA0408Q6ZU52 694 aa12.07□□□□□ -0.48
CTCFL-209ENST00000433949 C10orf107Q8IVU9 208 aa12.07□□□□□ -0.48
CTCFL-209ENST00000433949 GDPD5Q8WTR4 605 aa12.07□□□□□ -0.48
CTCFL-209ENST00000433949 PTCD3Q96EY7 689 aaKnown RBP12.07□□□□□ -0.48
CTCFL-209ENST00000433949 IMP4Q96G21 291 aaKnown RBP12.07□□□□□ -0.48
CTCFL-209ENST00000433949 RANBP9Q96S59 729 aa12.07□□□□□ -0.48
CTCFL-209ENST00000433949 BTBD10Q9BSF8 475 aa12.07□□□□□ -0.48
CTCFL-209ENST00000433949 TMEM114B3SHH9 223 aa12.07□□□□□ -0.48
CTCFL-209ENST00000433949 LILRB3O75022 631 aa12.07□□□□□ -0.48
CTCFL-209ENST00000433949 PMPCBO75439 489 aa12.07□□□□□ -0.48
CTCFL-209ENST00000433949 PEX11BO96011 259 aa12.07□□□□□ -0.48
CTCFL-209ENST00000433949 PRKCGP05129 697 aa12.07□□□□□ -0.48
CTCFL-209ENST00000433949 ESRRAP11474 423 aaPredicted RBP12.07□□□□□ -0.48
CTCFL-209ENST00000433949 EZRP15311 586 aaKnown RBP12.07□□□□□ -0.48
CTCFL-209ENST00000433949 HARS2P49590 506 aaKnown RBP12.07□□□□□ -0.48
CTCFL-209ENST00000433949 IL10RBQ08334 325 aa12.07□□□□□ -0.48
CTCFL-209ENST00000433949 SLC12A1Q13621 1099 aa12.07□□□□□ -0.48
CTCFL-209ENST00000433949 THOC5Q13769 683 aaKnown RBP12.07□□□□□ -0.48
CTCFL-209ENST00000433949 CES4AQ5XG92 561 aa12.07□□□□□ -0.48
CTCFL-209ENST00000433949 FBXL22Q6P050 247 aa12.07□□□□□ -0.48
CTCFL-209ENST00000433949 TEX26Q8N6G2 289 aa12.07□□□□□ -0.48
CTCFL-209ENST00000433949 UTP4Q969X6 686 aaKnown RBP12.07□□□□□ -0.48
CTCFL-209ENST00000433949 HMCESQ96FZ2 354 aa12.07□□□□□ -0.48
CTCFL-209ENST00000433949 ATXN7L3BQ96GX2 97 aa12.07□□□□□ -0.48
CTCFL-209ENST00000433949 ZNF778Q96MU6 729 aa12.07□□□□□ -0.48
CTCFL-209ENST00000433949 TTLL2Q9BWV7 592 aa12.07□□□□□ -0.48
CTCFL-209ENST00000433949 C20orf27Q9GZN8 174 aa12.07□□□□□ -0.48
CTCFL-209ENST00000433949 NMRAL1Q9HBL8 299 aa12.07□□□□□ -0.48
CTCFL-209ENST00000433949 TREX1Q9NSU2 369 aa12.07□□□□□ -0.48
CTCFL-209ENST00000433949 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.07□□□□□ -0.48
CTCFL-209ENST00000433949 C5orf42Q9H799 3197 aa12.07□□□□□ -0.48
CTCFL-209ENST00000433949 TRIOBPQ9H2D6 2365 aa12.07□□□□□ -0.48
CTCFL-209ENST00000433949 SLC12A8A0AV02 714 aa12.06□□□□□ -0.48
CTCFL-209ENST00000433949 C2orf71A6NGG8 1288 aa12.06□□□□□ -0.48
CTCFL-209ENST00000433949 EPOPA6NHQ4 379 aa12.06□□□□□ -0.48
CTCFL-209ENST00000433949 TGM5O43548 720 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms