RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 SPARCL1Q14515 664 aa26.79■■□□□ 1.88
TMEM248-205ENST00000433271 E2F5Q15329 346 aa26.79■■□□□ 1.88
TMEM248-205ENST00000433271 SLC44A4Q53GD3 710 aa26.79■■□□□ 1.88
TMEM248-205ENST00000433271 NCEH1Q6PIU2 408 aa26.79■■□□□ 1.88
TMEM248-205ENST00000433271 LINC00523Q86TU6 105 aa26.79■■□□□ 1.88
TMEM248-205ENST00000433271 IPMKQ8NFU5 416 aa26.79■■□□□ 1.88
TMEM248-205ENST00000433271 ADRA1AP35348 466 aa26.78■■□□□ 1.88
TMEM248-205ENST00000433271 ZNF234Q14588 700 aa26.78■■□□□ 1.88
TMEM248-205ENST00000433271 CARD16Q5EG05 197 aa26.78■■□□□ 1.88
TMEM248-205ENST00000433271 TMEM196Q5HYL7 178 aa26.78■■□□□ 1.88
TMEM248-205ENST00000433271 IER5LQ5T953 404 aa26.78■■□□□ 1.88
TMEM248-205ENST00000433271 NAPEPLDQ6IQ20 393 aa26.78■■□□□ 1.88
TMEM248-205ENST00000433271 AENQ8WTP8 325 aaKnown RBP26.78■■□□□ 1.88
TMEM248-205ENST00000433271 MRGPRX2Q96LB1 330 aa26.78■■□□□ 1.88
TMEM248-205ENST00000433271 NSMCE3Q96MG7 304 aa26.78■■□□□ 1.88
TMEM248-205ENST00000433271 SERPINB12Q96P63 405 aa26.78■■□□□ 1.88
TMEM248-205ENST00000433271 XAB2Q9HCS7 855 aaKnown RBP26.78■■□□□ 1.88
TMEM248-205ENST00000433271 THAP10Q9P2Z0 257 aaPredicted RBP26.78■■□□□ 1.88
TMEM248-205ENST00000433271 SORCS3Q9UPU3 1222 aa26.78■■□□□ 1.88
TMEM248-205ENST00000433271 K7EQS6 105 aa26.77■■□□□ 1.88
TMEM248-205ENST00000433271 FAM153BP0C7A2 387 aa26.77■■□□□ 1.88
TMEM248-205ENST00000433271 PON2Q15165 354 aa26.77■■□□□ 1.88
TMEM248-205ENST00000433271 HIF1AQ16665 826 aa26.77■■□□□ 1.88
TMEM248-205ENST00000433271 FAM153CQ494X1 144 aa26.77■■□□□ 1.88
TMEM248-205ENST00000433271 MAP9Q49MG5 647 aa26.77■■□□□ 1.88
TMEM248-205ENST00000433271 FNDC3BQ53EP0 1204 aaKnown RBP26.77■■□□□ 1.88
TMEM248-205ENST00000433271 Q6ZVU0 165 aa26.77■■□□□ 1.88
TMEM248-205ENST00000433271 CAND1Q86VP6 1230 aaKnown RBP26.77■■□□□ 1.88
TMEM248-205ENST00000433271 PWWP2AQ96N64 755 aa26.77■■□□□ 1.88
TMEM248-205ENST00000433271 FSD1LQ9BXM9 530 aa26.77■■□□□ 1.88
TMEM248-205ENST00000433271 HECAQ9UBI9 543 aaPredicted RBP26.77■■□□□ 1.88
TMEM248-205ENST00000433271 HCN2Q9UL51 889 aa26.77■■□□□ 1.88
TMEM248-205ENST00000433271 NPC1O15118 1278 aa26.76■■□□□ 1.87
TMEM248-205ENST00000433271 PPFIA2O75334 1257 aa26.76■■□□□ 1.87
TMEM248-205ENST00000433271 ERLIN1O75477 346 aa26.76■■□□□ 1.87
TMEM248-205ENST00000433271 EPOP01588 193 aa26.76■■□□□ 1.87
TMEM248-205ENST00000433271 MLNP12872 115 aa26.76■■□□□ 1.87
TMEM248-205ENST00000433271 HNRNPLP14866 589 aaKnown RBP eCLIP26.76■■□□□ 1.87
TMEM248-205ENST00000433271 DRD1P21728 446 aa26.76■■□□□ 1.87
TMEM248-205ENST00000433271 GRIA1P42261 906 aa26.76■■□□□ 1.87
TMEM248-205ENST00000433271 RECQLP46063 649 aaPredicted RBP26.76■■□□□ 1.87
TMEM248-205ENST00000433271 ARL4CP56559 192 aa26.76■■□□□ 1.87
TMEM248-205ENST00000433271 GRSF1Q12849 480 aaKnown RBP eCLIP26.76■■□□□ 1.87
TMEM248-205ENST00000433271 PCSK7Q16549 785 aa26.76■■□□□ 1.87
TMEM248-205ENST00000433271 MYLK3Q32MK0 819 aa26.76■■□□□ 1.87
TMEM248-205ENST00000433271 LRRC8BQ6P9F7 803 aa26.76■■□□□ 1.87
TMEM248-205ENST00000433271 EMBQ6PCB8 327 aa26.76■■□□□ 1.87
TMEM248-205ENST00000433271 RANBP10Q6VN20 620 aa26.76■■□□□ 1.87
TMEM248-205ENST00000433271 ZNF534Q76KX8 674 aa26.76■■□□□ 1.87
TMEM248-205ENST00000433271 PDIK1LQ8N165 341 aa26.76■■□□□ 1.87
TMEM248-205ENST00000433271 OR2A12Q8NGT7 310 aa26.76■■□□□ 1.87
TMEM248-205ENST00000433271 EZH1Q92800 747 aaPredicted RBP26.76■■□□□ 1.87
TMEM248-205ENST00000433271 TBL1YQ9BQ87 522 aa26.76■■□□□ 1.87
TMEM248-205ENST00000433271 TMEM245Q9H330 911 aa26.76■■□□□ 1.87
TMEM248-205ENST00000433271 EVLQ9UI08 416 aaPredicted RBP26.76■■□□□ 1.87
TMEM248-205ENST00000433271 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP26.76■■□□□ 1.87
TMEM248-205ENST00000433271 USP12O75317 370 aa26.76■■□□□ 1.87
TMEM248-205ENST00000433271 POP4O95707 220 aaKnown RBP26.76■■□□□ 1.87
TMEM248-205ENST00000433271 CBLBQ13191 982 aa26.76■■□□□ 1.87
TMEM248-205ENST00000433271 DPY19L3Q6ZPD9 716 aa26.76■■□□□ 1.87
TMEM248-205ENST00000433271 CEP128Q6ZU80 1094 aa26.76■■□□□ 1.87
TMEM248-205ENST00000433271 RYBPQ8N488 228 aaPredicted RBP26.76■■□□□ 1.87
TMEM248-205ENST00000433271 HNRNPLLQ8WVV9 542 aaKnown RBP26.76■■□□□ 1.87
TMEM248-205ENST00000433271 FICDQ9BVA6 458 aa26.76■■□□□ 1.87
TMEM248-205ENST00000433271 PHACTR1Q9C0D0 580 aa26.76■■□□□ 1.87
TMEM248-205ENST00000433271 LOC285095A0A1B0GVY8 99 aa26.75■■□□□ 1.87
TMEM248-205ENST00000433271 AP3B1O00203 1094 aa26.75■■□□□ 1.87
TMEM248-205ENST00000433271 AGTP01019 485 aa26.75■■□□□ 1.87
TMEM248-205ENST00000433271 BMP1P13497 986 aa26.75■■□□□ 1.87
TMEM248-205ENST00000433271 H2AFXP16104 143 aaPredicted RBP26.75■■□□□ 1.87
TMEM248-205ENST00000433271 MAGEA3P43357 314 aa26.75■■□□□ 1.87
TMEM248-205ENST00000433271 OLIG2Q13516 323 aa26.75■■□□□ 1.87
TMEM248-205ENST00000433271 FNBP1LQ5T0N5 605 aa26.75■■□□□ 1.87
TMEM248-205ENST00000433271 EMC10Q5UCC4 262 aa26.75■■□□□ 1.87
TMEM248-205ENST00000433271 EGFLAMQ63HQ2 1017 aa26.75■■□□□ 1.87
TMEM248-205ENST00000433271 FSTL4Q6MZW2 842 aa26.75■■□□□ 1.87
TMEM248-205ENST00000433271 SERPINA13PQ6UXR4 307 aa26.75■■□□□ 1.87
TMEM248-205ENST00000433271 OR6K2Q8NGY2 324 aa26.75■■□□□ 1.87
TMEM248-205ENST00000433271 KCNV2Q8TDN2 545 aa26.75■■□□□ 1.87
TMEM248-205ENST00000433271 PTPRN2Q92932 1015 aa26.75■■□□□ 1.87
TMEM248-205ENST00000433271 FEM1CQ96JP0 617 aa26.75■■□□□ 1.87
TMEM248-205ENST00000433271 CPEB1Q9BZB8 566 aaKnown RBP26.75■■□□□ 1.87
TMEM248-205ENST00000433271 CASS4Q9NQ75 786 aa26.75■■□□□ 1.87
TMEM248-205ENST00000433271 ARGLU1Q9NWB6 273 aaPredicted RBP26.75■■□□□ 1.87
TMEM248-205ENST00000433271 ARIH1Q9Y4X5 557 aaPredicted RBP26.75■■□□□ 1.87
TMEM248-205ENST00000433271 BNIP3LO60238 219 aa26.74■■□□□ 1.87
TMEM248-205ENST00000433271 KIR2DL1P43626 348 aaPredicted RBP26.74■■□□□ 1.87
TMEM248-205ENST00000433271 TNNT3P45378 269 aaPredicted RBP26.74■■□□□ 1.87
TMEM248-205ENST00000433271 CCNHP51946 323 aaPredicted RBP26.74■■□□□ 1.87
TMEM248-205ENST00000433271 RAD51Q06609 339 aa26.74■■□□□ 1.87
TMEM248-205ENST00000433271 CDK18Q07002 472 aa26.74■■□□□ 1.87
TMEM248-205ENST00000433271 HNRNPA1L2Q32P51 320 aaKnown RBP26.74■■□□□ 1.87
TMEM248-205ENST00000433271 TPRG1Q6ZUI0 275 aa26.74■■□□□ 1.87
TMEM248-205ENST00000433271 CENPUQ71F23 418 aa26.74■■□□□ 1.87
TMEM248-205ENST00000433271 KDELC2Q7Z4H8 507 aa26.74■■□□□ 1.87
TMEM248-205ENST00000433271 CCDC25Q86WR0 208 aa26.74■■□□□ 1.87
TMEM248-205ENST00000433271 OR52K1Q8NGK4 314 aa26.74■■□□□ 1.87
TMEM248-205ENST00000433271 FAM3CQ92520 227 aa26.74■■□□□ 1.87
TMEM248-205ENST00000433271 ASB2Q96Q27 587 aa26.74■■□□□ 1.87
TMEM248-205ENST00000433271 TUBGCP5Q96RT8 1024 aa26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms