RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 DRD3P35462 400 aa5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 MAPK8P45983 427 aa5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 CSNK1EP49674 416 aaKnown RBP5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 CCNHP51946 323 aaPredicted RBP5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 NDST2P52849 883 aa5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 GEMIN4P57678 1058 aaKnown RBP5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 SNRPD1P62314 119 aaKnown RBP5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 ITKQ08881 620 aa5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 SLC10A7Q0GE19 358 aa5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 DPYSQ14117 519 aa5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 DPYSL3Q14195 570 aa5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 DPYSL2Q16555 572 aa5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 MYLK3Q32MK0 819 aa5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 UAP1L1Q3KQV9 507 aa5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 PARP15Q460N3 678 aa5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 CRTC2Q53ET0 693 aaPredicted RBP5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 ODF2Q5BJF6 829 aa5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 LRRC73Q5JTD7 316 aa5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 SPDYCQ5MJ68 293 aa5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 PRAMEF14Q5SWL7 426 aa5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 KIAA0895LQ68EN5 471 aa5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 FBXL19Q6PCT2 694 aa5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 NCEH1Q6PIU2 408 aa5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 USP30Q70CQ3 517 aa5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 B4GALNT4Q76KP1 1039 aa5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 DSG4Q86SJ6 1040 aa5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 KIAA1328Q86T90 577 aa5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 PSTKQ8IV42 348 aaKnown RBP5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 MAP7D3Q8IWC1 876 aa5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 RHOT2Q8IXI1 618 aa5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 CCDC170Q8IYT3 715 aa5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 ZCCHC9Q8N567 271 aaKnown RBP5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 PCDH20Q8N6Y1 951 aaKnown RBP5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 TMIEQ8NEW7 156 aa5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 OR2AP1Q8NGE2 309 aa5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 OR2I1PQ8NGU4 316 aa5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 PCDH19Q8TAB3 1148 aa5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 TEKT4Q8WW24 435 aa5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 RAPGEF5Q92565 580 aa5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 CCDC114Q96M63 670 aa5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 KLHL32Q96NJ5 620 aa5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 CSPG4P5Q96PW8 444 aa5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 EIF3CQ99613 913 aaKnown RBP5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 DESI2Q9BSY9 194 aa5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 NUSAP1Q9BXS6 441 aaKnown RBP5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 MAK16Q9BXY0 300 aaKnown RBP5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 ZFAND3Q9H8U3 227 aa5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 FBRSQ9HAH7 460 aa5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 EBF2Q9HAK2 575 aa5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 SP110Q9HB58 689 aa5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 SGK2Q9HBY8 427 aa5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 DYRK4Q9NR20 520 aa5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 IMPACTQ9P2X3 320 aa5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 UBA2Q9UBT2 640 aaPredicted RBP5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 INTUQ9ULD6 942 aa5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 SCML1Q9UN30 329 aa5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 PCDHGA5Q9Y5G8 931 aa5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 PCDHGA11Q9Y5H2 935 aa5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 ALG6Q9Y672 507 aa5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 SLCO1B1Q9Y6L6 691 aa5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 MUC3AQ02505 3323 aa5.86□□□□□ -1.47
HMGB3P24-201ENST00000433260 TMEM131Q92545 1883 aa5.85□□□□□ -1.47
HMGB3P24-201ENST00000433260 SDK1Q7Z5N4 2213 aa5.85□□□□□ -1.47
HMGB3P24-201ENST00000433260 TRIOO75962 3097 aa5.85□□□□□ -1.47
HMGB3P24-201ENST00000433260 DCDC2BA2VCK2 349 aa5.85□□□□□ -1.47
HMGB3P24-201ENST00000433260 LRRD1A4D1F6 860 aa5.85□□□□□ -1.47
HMGB3P24-201ENST00000433260 ZSCAN5CA6NGD5 496 aaPredicted RBP5.85□□□□□ -1.47
HMGB3P24-201ENST00000433260 C16orf96A6NNT2 1141 aa5.85□□□□□ -1.47
HMGB3P24-201ENST00000433260 C4orf47A7E2U8 309 aa5.85□□□□□ -1.47
HMGB3P24-201ENST00000433260 A8MX80 341 aa5.85□□□□□ -1.47
HMGB3P24-201ENST00000433260 GOLGA6L6A8MZA4 724 aa5.85□□□□□ -1.47
HMGB3P24-201ENST00000433260 ALOX15BO15296 676 aa5.85□□□□□ -1.47
HMGB3P24-201ENST00000433260 BCAT2O15382 392 aaPredicted RBP5.85□□□□□ -1.47
HMGB3P24-201ENST00000433260 SLC31A1O15431 190 aa5.85□□□□□ -1.47
HMGB3P24-201ENST00000433260 SPOPO43791 374 aa5.85□□□□□ -1.47
HMGB3P24-201ENST00000433260 BUB1BO60566 1050 aaPredicted RBP5.85□□□□□ -1.47
HMGB3P24-201ENST00000433260 PRAMEF11O60813 436 aa5.85□□□□□ -1.47
HMGB3P24-201ENST00000433260 RNGTTO60942 597 aaKnown RBP5.85□□□□□ -1.47
HMGB3P24-201ENST00000433260 TMCC1O94876 653 aa5.85□□□□□ -1.47
HMGB3P24-201ENST00000433260 IPO7O95373 1038 aaKnown RBP5.85□□□□□ -1.47
HMGB3P24-201ENST00000433260 IGLV3-19P01714 112 aa5.85□□□□□ -1.47
HMGB3P24-201ENST00000433260 PRNPP04156 253 aa5.85□□□□□ -1.47
HMGB3P24-201ENST00000433260 KRT1P04264 644 aa5.85□□□□□ -1.47
HMGB3P24-201ENST00000433260 UGT2B4P06133 528 aa5.85□□□□□ -1.47
HMGB3P24-201ENST00000433260 KRT10P13645 584 aa5.85□□□□□ -1.47
HMGB3P24-201ENST00000433260 GNSP15586 552 aa5.85□□□□□ -1.47
HMGB3P24-201ENST00000433260 ENGP17813 658 aa5.85□□□□□ -1.47
HMGB3P24-201ENST00000433260 CDC25BP30305 580 aa5.85□□□□□ -1.47
HMGB3P24-201ENST00000433260 HTR7P34969 479 aa5.85□□□□□ -1.47
HMGB3P24-201ENST00000433260 PTGIRP43119 386 aa5.85□□□□□ -1.47
HMGB3P24-201ENST00000433260 RGRP47804 291 aa5.85□□□□□ -1.47
HMGB3P24-201ENST00000433260 ID4P47928 161 aa5.85□□□□□ -1.47
HMGB3P24-201ENST00000433260 SCNN1BP51168 640 aa5.85□□□□□ -1.47
HMGB3P24-201ENST00000433260 ARSEP51690 589 aa5.85□□□□□ -1.47
HMGB3P24-201ENST00000433260 ATXN3P54252 364 aaPredicted RBP5.85□□□□□ -1.47
HMGB3P24-201ENST00000433260 ADPRHP54922 357 aa5.85□□□□□ -1.47
HMGB3P24-201ENST00000433260 PPP2CBP62714 309 aa5.85□□□□□ -1.47
HMGB3P24-201ENST00000433260 DYNLT1P63172 113 aa5.85□□□□□ -1.47
HMGB3P24-201ENST00000433260 PPP2CAP67775 309 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms