RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 RADILQ96JH8 1075 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 SIGLEC10Q96LC7 697 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 GCNAQ96QF7 691 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 EBNA1BP2Q99848 306 aaKnown RBP8.17□□□□□ -1.1
VTI1A-202ENST00000432306 FAM213AQ9BRX8 229 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 TTLL2Q9BWV7 592 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 BCO2Q9BYV7 579 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 GCOM2Q9BZD3 368 aaPredicted RBP8.17□□□□□ -1.1
VTI1A-202ENST00000432306 TSPAN10Q9H1Z9 355 aaPredicted RBP8.17□□□□□ -1.1
VTI1A-202ENST00000432306 PLGRKTQ9HBL7 147 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 PRDM6Q9NQX0 595 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 VPS45Q9NRW7 570 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 ZC3H7BQ9UGR2 993 aaKnown RBP8.17□□□□□ -1.1
VTI1A-202ENST00000432306 DCDC2Q9UHG0 476 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 PTBP2Q9UKA9 531 aaKnown RBP8.17□□□□□ -1.1
VTI1A-202ENST00000432306 DNAJC16Q9Y2G8 782 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 PCDHB12Q9Y5F1 795 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 PCDHA11Q9Y5I1 949 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 PTPRJQ12913 1337 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 SYNJ2BP-COX16A0A087WUM0 186 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 MEI4A8MW99 385 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 MUSKO15146 869 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 ZBED1O96006 694 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 SLURP2P0DP57 97 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 CYP2C8P10632 490 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 ZNF26P17031 533 aaPredicted RBP8.17□□□□□ -1.1
VTI1A-202ENST00000432306 SYN1P17600 705 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 TGM2P21980 687 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 PSMA2P25787 234 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 SERPINB6P35237 376 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 SLC19A1P41440 591 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 LIMK1P53667 647 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 NUP107P57740 925 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 RAC1P63000 192 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 NIPAL4Q0D2K0 466 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 ZNF423Q2M1K9 1284 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 MDH1BQ5I0G3 518 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 SNAP47Q5SQN1 464 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 SPOPLQ6IQ16 392 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 GPAT2Q6NUI2 795 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 EPGNQ6UW88 154 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 UNC5AQ6ZN44 842 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 ZNF534Q76KX8 674 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 GPR155Q7Z3F1 870 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 MAP7D3Q8IWC1 876 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 RNF168Q8IYW5 571 aaPredicted RBP8.17□□□□□ -1.1
VTI1A-202ENST00000432306 CBARPQ8N350 705 aaPredicted RBP8.17□□□□□ -1.1
VTI1A-202ENST00000432306 TMEM102Q8N9M5 508 aaPredicted RBP8.17□□□□□ -1.1
VTI1A-202ENST00000432306 RP9Q8TA86 221 aaKnown RBP8.17□□□□□ -1.1
VTI1A-202ENST00000432306 FAM151AQ8WW52 585 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 ZNF597Q96LX8 424 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 UHRF1Q96T88 793 aaPredicted RBP8.17□□□□□ -1.1
VTI1A-202ENST00000432306 TREX2Q9BQ50 279 aaPredicted RBP8.17□□□□□ -1.1
VTI1A-202ENST00000432306 NIFKQ9BYG3 293 aaKnown RBP8.17□□□□□ -1.1
VTI1A-202ENST00000432306 IMPG2Q9BZV3 1241 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 ZNF385DQ9H6B1 395 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 C11orf49Q9H6J7 331 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 IFT22Q9H7X7 185 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 BRD9Q9H8M2 597 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 ZNF395Q9H8N7 513 aaPredicted RBP8.17□□□□□ -1.1
VTI1A-202ENST00000432306 XPNPEP1Q9NQW7 623 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 COL20A1Q9P218 1284 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 IGSF9Q9P2J2 1179 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 SAE1Q9UBE0 346 aaPredicted RBP8.17□□□□□ -1.1
VTI1A-202ENST00000432306 FEM1BQ9UK73 627 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 GPR34Q9UPC5 381 aa8.17□□□□□ -1.1
VTI1A-202ENST00000432306 DOCK1Q14185 1865 aa8.16□□□□□ -1.1
VTI1A-202ENST00000432306 TMEM114B3SHH9 223 aa8.16□□□□□ -1.1
VTI1A-202ENST00000432306 TADA2AO75478 443 aa8.16□□□□□ -1.1
VTI1A-202ENST00000432306 STAM2O75886 525 aa8.16□□□□□ -1.1
VTI1A-202ENST00000432306 BCAS2O75934 225 aaPredicted RBP8.16□□□□□ -1.1
VTI1A-202ENST00000432306 GDF11O95390 407 aa8.16□□□□□ -1.1
VTI1A-202ENST00000432306 BMP10O95393 424 aa8.16□□□□□ -1.1
VTI1A-202ENST00000432306 TRUB2O95900 331 aaKnown RBP8.16□□□□□ -1.1
VTI1A-202ENST00000432306 CCNE2O96020 404 aa8.16□□□□□ -1.1
VTI1A-202ENST00000432306 SLC4A1P02730 911 aa8.16□□□□□ -1.1
VTI1A-202ENST00000432306 HMGCRP04035 888 aa8.16□□□□□ -1.1
VTI1A-202ENST00000432306 ALDH2P05091 517 aa8.16□□□□□ -1.1
VTI1A-202ENST00000432306 THRAP10827 490 aa8.16□□□□□ -1.1
VTI1A-202ENST00000432306 KRT3P12035 628 aa8.16□□□□□ -1.1
VTI1A-202ENST00000432306 TNNI1P19237 187 aa8.16□□□□□ -1.1
VTI1A-202ENST00000432306 RFC1P35251 1148 aaPredicted RBP8.16□□□□□ -1.1
VTI1A-202ENST00000432306 CD86P42081 329 aa8.16□□□□□ -1.1
VTI1A-202ENST00000432306 NLRP11P59045 1033 aaKnown RBP8.16□□□□□ -1.1
VTI1A-202ENST00000432306 YWHAEP62258 255 aaKnown RBP8.16□□□□□ -1.1
VTI1A-202ENST00000432306 PLOD1Q02809 727 aaPredicted RBP8.16□□□□□ -1.1
VTI1A-202ENST00000432306 KLF10Q13118 480 aa8.16□□□□□ -1.1
VTI1A-202ENST00000432306 CBX3Q13185 183 aa8.16□□□□□ -1.1
VTI1A-202ENST00000432306 FRG1Q14331 258 aaKnown RBP8.16□□□□□ -1.1
VTI1A-202ENST00000432306 LRRC36Q1X8D7 754 aa8.16□□□□□ -1.1
VTI1A-202ENST00000432306 CCDC153Q494R4 210 aa8.16□□□□□ -1.1
VTI1A-202ENST00000432306 PTPN20Q4JDL3 420 aa8.16□□□□□ -1.1
VTI1A-202ENST00000432306 SEZ6Q53EL9 994 aa8.16□□□□□ -1.1
VTI1A-202ENST00000432306 OLFML2BQ68BL8 750 aa8.16□□□□□ -1.1
VTI1A-202ENST00000432306 SLC9A4Q6AI14 798 aa8.16□□□□□ -1.1
VTI1A-202ENST00000432306 CYP4V2Q6ZWL3 525 aaPredicted RBP8.16□□□□□ -1.1
VTI1A-202ENST00000432306 CARM1Q86X55 608 aa8.16□□□□□ -1.1
VTI1A-202ENST00000432306 WDR49Q8IV35 697 aa8.16□□□□□ -1.1
VTI1A-202ENST00000432306 SLC44A2Q8IWA5 706 aaPredicted RBP8.16□□□□□ -1.1
VTI1A-202ENST00000432306 PGAM4Q8N0Y7 254 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms