RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 ANTXRLA6NF34 631 aa11.14□□□□□ -0.63
CHD4-202ENST00000430771 ANXA9O76027 345 aa11.14□□□□□ -0.63
CHD4-202ENST00000430771 PAPSS2O95340 614 aaPredicted RBP11.14□□□□□ -0.63
CHD4-202ENST00000430771 ADH1BP00325 375 aa11.14□□□□□ -0.63
CHD4-202ENST00000430771 COL9A1P20849 921 aa11.14□□□□□ -0.63
CHD4-202ENST00000430771 FDFT1P37268 417 aa11.14□□□□□ -0.63
CHD4-202ENST00000430771 RGRP47804 291 aa11.14□□□□□ -0.63
CHD4-202ENST00000430771 PSMD8P48556 350 aa11.14□□□□□ -0.63
CHD4-202ENST00000430771 DR1Q01658 176 aa11.14□□□□□ -0.63
CHD4-202ENST00000430771 DSC2Q02487 901 aa11.14□□□□□ -0.63
CHD4-202ENST00000430771 BCL2L1Q07817 233 aa11.14□□□□□ -0.63
CHD4-202ENST00000430771 SFSWAPQ12872 951 aaKnown RBP11.14□□□□□ -0.63
CHD4-202ENST00000430771 MTAPQ13126 283 aa11.14□□□□□ -0.63
CHD4-202ENST00000430771 MPP3Q13368 585 aa11.14□□□□□ -0.63
CHD4-202ENST00000430771 GAS6Q14393 721 aa11.14□□□□□ -0.63
CHD4-202ENST00000430771 STK40Q8N2I9 435 aa11.14□□□□□ -0.63
CHD4-202ENST00000430771 FBXL6Q8N531 539 aa11.14□□□□□ -0.63
CHD4-202ENST00000430771 CNTD1Q8N815 330 aa11.14□□□□□ -0.63
CHD4-202ENST00000430771 OR6K2Q8NGY2 324 aa11.14□□□□□ -0.63
CHD4-202ENST00000430771 FCRL5Q96RD9 977 aa11.14□□□□□ -0.63
CHD4-202ENST00000430771 KRT12Q99456 494 aa11.14□□□□□ -0.63
CHD4-202ENST00000430771 CPEB1Q9BZB8 566 aaKnown RBP11.14□□□□□ -0.63
CHD4-202ENST00000430771 RSPH9Q9H1X1 276 aaPredicted RBP11.14□□□□□ -0.63
CHD4-202ENST00000430771 MTG2Q9H4K7 406 aa11.14□□□□□ -0.63
CHD4-202ENST00000430771 L2HGDHQ9H9P8 463 aa11.14□□□□□ -0.63
CHD4-202ENST00000430771 DYRK4Q9NR20 520 aa11.14□□□□□ -0.63
CHD4-202ENST00000430771 SPATA6Q9NWH7 488 aaPredicted RBP11.14□□□□□ -0.63
CHD4-202ENST00000430771 BCCIPQ9P287 314 aaKnown RBP eCLIP11.14□□□□□ -0.63
CHD4-202ENST00000430771 EVLQ9UI08 416 aaPredicted RBP11.14□□□□□ -0.63
CHD4-202ENST00000430771 SCML1Q9UN30 329 aa11.14□□□□□ -0.63
CHD4-202ENST00000430771 TRIOO75962 3097 aa11.14□□□□□ -0.63
CHD4-202ENST00000430771 NDC80O14777 642 aa11.13□□□□□ -0.63
CHD4-202ENST00000430771 LEFTY1O75610 366 aa11.13□□□□□ -0.63
CHD4-202ENST00000430771 APBB3O95704 486 aa11.13□□□□□ -0.63
CHD4-202ENST00000430771 IL1BP01584 269 aa11.13□□□□□ -0.63
CHD4-202ENST00000430771 KRT14P02533 472 aa11.13□□□□□ -0.63
CHD4-202ENST00000430771 DNTTP04053 509 aa11.13□□□□□ -0.63
CHD4-202ENST00000430771 UGT2B4P06133 528 aa11.13□□□□□ -0.63
CHD4-202ENST00000430771 NFKBIAP25963 317 aa11.13□□□□□ -0.63
CHD4-202ENST00000430771 PSMB4P28070 264 aa11.13□□□□□ -0.63
CHD4-202ENST00000430771 CD68P34810 354 aaPredicted RBP11.13□□□□□ -0.63
CHD4-202ENST00000430771 CD86P42081 329 aa11.13□□□□□ -0.63
CHD4-202ENST00000430771 CXCL12P48061 93 aa11.13□□□□□ -0.63
CHD4-202ENST00000430771 COPAP53621 1224 aa11.13□□□□□ -0.63
CHD4-202ENST00000430771 GEMP55040 296 aa11.13□□□□□ -0.63
CHD4-202ENST00000430771 ZBTB16Q05516 673 aa11.13□□□□□ -0.63
CHD4-202ENST00000430771 CCDC15Q0P6D6 951 aa11.13□□□□□ -0.63
CHD4-202ENST00000430771 PTK6Q13882 451 aa11.13□□□□□ -0.63
CHD4-202ENST00000430771 CST6Q15828 149 aa11.13□□□□□ -0.63
CHD4-202ENST00000430771 PARP6Q2NL67 630 aa11.13□□□□□ -0.63
CHD4-202ENST00000430771 MYLK3Q32MK0 819 aa11.13□□□□□ -0.63
CHD4-202ENST00000430771 CCDC70Q6NSX1 233 aa11.13□□□□□ -0.63
CHD4-202ENST00000430771 KIAA1211LQ6NV74 962 aa11.13□□□□□ -0.63
CHD4-202ENST00000430771 C8orf74Q6P047 294 aa11.13□□□□□ -0.63
CHD4-202ENST00000430771 NCEH1Q6PIU2 408 aa11.13□□□□□ -0.63
CHD4-202ENST00000430771 TMEM92Q6UXU6 159 aa11.13□□□□□ -0.63
CHD4-202ENST00000430771 MAMSTRQ6ZN01 415 aa11.13□□□□□ -0.63
CHD4-202ENST00000430771 MAATS1Q7Z4T9 603 aa11.13□□□□□ -0.63
CHD4-202ENST00000430771 JAMLQ86YT9 394 aa11.13□□□□□ -0.63
CHD4-202ENST00000430771 CAMKK1Q8N5S9 505 aa11.13□□□□□ -0.63
CHD4-202ENST00000430771 CHST14Q8NCH0 376 aa11.13□□□□□ -0.63
CHD4-202ENST00000430771 TMIEQ8NEW7 156 aa11.13□□□□□ -0.63
CHD4-202ENST00000430771 ARRDC2Q8TBH0 407 aa11.13□□□□□ -0.63
CHD4-202ENST00000430771 PIP4K2CQ8TBX8 421 aa11.13□□□□□ -0.63
CHD4-202ENST00000430771 PRCCQ92733 491 aaPredicted RBP11.13□□□□□ -0.63
CHD4-202ENST00000430771 IMP4Q96G21 291 aaKnown RBP11.13□□□□□ -0.63
CHD4-202ENST00000430771 ZNF641Q96N77 438 aaPredicted RBP11.13□□□□□ -0.63
CHD4-202ENST00000430771 HHIPQ96QV1 700 aa11.13□□□□□ -0.63
CHD4-202ENST00000430771 FSD1LQ9BXM9 530 aa11.13□□□□□ -0.63
CHD4-202ENST00000430771 TDRD1Q9BXT4 1180 aaKnown RBP11.13□□□□□ -0.63
CHD4-202ENST00000430771 DLGAP2Q9P1A6 1054 aa11.13□□□□□ -0.63
CHD4-202ENST00000430771 ASIC3Q9UHC3 531 aa11.13□□□□□ -0.63
CHD4-202ENST00000430771 FAM153AQ9UHL3 310 aa11.13□□□□□ -0.63
CHD4-202ENST00000430771 AAR2Q9Y312 384 aaKnown RBP11.13□□□□□ -0.63
CHD4-202ENST00000430771 WASF2Q9Y6W5 498 aa11.13□□□□□ -0.63
CHD4-202ENST00000430771 MUC3AQ02505 3323 aa11.12□□□□□ -0.63
CHD4-202ENST00000430771 CUL9Q8IWT3 2517 aa11.12□□□□□ -0.63
CHD4-202ENST00000430771 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.12□□□□□ -0.63
CHD4-202ENST00000430771 FAM187AA6NFU0 413 aa11.12□□□□□ -0.63
CHD4-202ENST00000430771 ERI2A8K979 691 aaKnown RBP11.12□□□□□ -0.63
CHD4-202ENST00000430771 E7EVH7 732 aa11.12□□□□□ -0.63
CHD4-202ENST00000430771 KPNA3O00505 521 aaPredicted RBP11.12□□□□□ -0.63
CHD4-202ENST00000430771 PSMD3O43242 534 aa11.12□□□□□ -0.63
CHD4-202ENST00000430771 LAMTOR5O43504 91 aa11.12□□□□□ -0.63
CHD4-202ENST00000430771 PIGNO95427 931 aa11.12□□□□□ -0.63
CHD4-202ENST00000430771 CPP00450 1065 aa11.12□□□□□ -0.63
CHD4-202ENST00000430771 CTSLP07711 333 aa11.12□□□□□ -0.63
CHD4-202ENST00000430771 ACADMP11310 421 aa11.12□□□□□ -0.63
CHD4-202ENST00000430771 NDUFV2P19404 249 aa11.12□□□□□ -0.63
CHD4-202ENST00000430771 C5AR1P21730 350 aa11.12□□□□□ -0.63
CHD4-202ENST00000430771 ITGB7P26010 798 aa11.12□□□□□ -0.63
CHD4-202ENST00000430771 LMAN1P49257 510 aa11.12□□□□□ -0.63
CHD4-202ENST00000430771 NRLP54845 237 aa11.12□□□□□ -0.63
CHD4-202ENST00000430771 BASP1P80723 227 aaKnown RBP11.12□□□□□ -0.63
CHD4-202ENST00000430771 SKOR1P84550 965 aa11.12□□□□□ -0.63
CHD4-202ENST00000430771 SATB1Q01826 763 aa11.12□□□□□ -0.63
CHD4-202ENST00000430771 ARMC12Q5T9G4 340 aa11.12□□□□□ -0.63
CHD4-202ENST00000430771 ANO7Q6IWH7 933 aa11.12□□□□□ -0.63
CHD4-202ENST00000430771 BRAT1Q6PJG6 821 aa11.12□□□□□ -0.63
CHD4-202ENST00000430771 KIAA1324Q6UXG2 1013 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms