RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 NUDT1P36639 197 aa11.96□□□□□ -0.49
HDAC4-202ENST00000430200 RECQLP46063 649 aaPredicted RBP11.96□□□□□ -0.49
HDAC4-202ENST00000430200 INSM1Q01101 510 aaPredicted RBP11.96□□□□□ -0.49
HDAC4-202ENST00000430200 OVGP1Q12889 678 aa11.96□□□□□ -0.49
HDAC4-202ENST00000430200 POLD3Q15054 466 aaPredicted RBP11.96□□□□□ -0.49
HDAC4-202ENST00000430200 COL28A1Q2UY09 1125 aa11.96□□□□□ -0.49
HDAC4-202ENST00000430200 ARL13BQ3SXY8 428 aa11.96□□□□□ -0.49
HDAC4-202ENST00000430200 SLC45A4Q5BKX6 768 aa11.96□□□□□ -0.49
HDAC4-202ENST00000430200 ACBD5Q5T8D3 534 aaPredicted RBP11.96□□□□□ -0.49
HDAC4-202ENST00000430200 ACAD10Q6JQN1 1059 aa11.96□□□□□ -0.49
HDAC4-202ENST00000430200 NEK5Q6P3R8 708 aa11.96□□□□□ -0.49
HDAC4-202ENST00000430200 SCYL2Q6P3W7 929 aa11.96□□□□□ -0.49
HDAC4-202ENST00000430200 ARHGAP36Q6ZRI8 547 aa11.96□□□□□ -0.49
HDAC4-202ENST00000430200 Q6ZSR6 202 aa11.96□□□□□ -0.49
HDAC4-202ENST00000430200 ZNF571Q7Z3V5 609 aaPredicted RBP11.96□□□□□ -0.49
HDAC4-202ENST00000430200 TMC6Q7Z403 805 aa11.96□□□□□ -0.49
HDAC4-202ENST00000430200 RBFAQ8N0V3 343 aa11.96□□□□□ -0.49
HDAC4-202ENST00000430200 OXR1Q8N573 874 aa11.96□□□□□ -0.49
HDAC4-202ENST00000430200 OR4C6Q8NH72 309 aa11.96□□□□□ -0.49
HDAC4-202ENST00000430200 ISG20Q96AZ6 181 aaKnown RBP11.96□□□□□ -0.49
HDAC4-202ENST00000430200 PPP1R16AQ96I34 528 aa11.96□□□□□ -0.49
HDAC4-202ENST00000430200 CELF6Q96J87 481 aaKnown RBP11.96□□□□□ -0.49
HDAC4-202ENST00000430200 KLHL32Q96NJ5 620 aa11.96□□□□□ -0.49
HDAC4-202ENST00000430200 KCTD15Q96SI1 283 aaPredicted RBP11.96□□□□□ -0.49
HDAC4-202ENST00000430200 CNPY3Q9BT09 278 aa11.96□□□□□ -0.49
HDAC4-202ENST00000430200 SNRNP25Q9BV90 132 aaKnown RBP11.96□□□□□ -0.49
HDAC4-202ENST00000430200 C1QTNF2Q9BXJ5 285 aa11.96□□□□□ -0.49
HDAC4-202ENST00000430200 MAGEH1Q9H213 219 aa11.96□□□□□ -0.49
HDAC4-202ENST00000430200 LRRC19Q9H756 370 aa11.96□□□□□ -0.49
HDAC4-202ENST00000430200 DKK4Q9UBT3 224 aa11.96□□□□□ -0.49
HDAC4-202ENST00000430200 FARP1Q9Y4F1 1045 aaPredicted RBP11.96□□□□□ -0.49
HDAC4-202ENST00000430200 PCDHGA1Q9Y5H4 931 aa11.96□□□□□ -0.49
HDAC4-202ENST00000430200 ARHGEF17Q96PE2 2063 aaPredicted RBP11.96□□□□□ -0.5
HDAC4-202ENST00000430200 FASNP49327 2511 aaKnown RBP11.95□□□□□ -0.5
HDAC4-202ENST00000430200 A6NNZ2 444 aa11.95□□□□□ -0.5
HDAC4-202ENST00000430200 J3KR12 359 aa11.95□□□□□ -0.5
HDAC4-202ENST00000430200 DDX3XO00571 662 aaKnown RBP eCLIP11.95□□□□□ -0.5
HDAC4-202ENST00000430200 TLX3O43711 291 aaPredicted RBP11.95□□□□□ -0.5
HDAC4-202ENST00000430200 MBD3O95983 291 aa11.95□□□□□ -0.5
HDAC4-202ENST00000430200 CELA2BP08218 269 aaPredicted RBP11.95□□□□□ -0.5
HDAC4-202ENST00000430200 FERP16591 822 aa11.95□□□□□ -0.5
HDAC4-202ENST00000430200 AKT2P31751 481 aa11.95□□□□□ -0.5
HDAC4-202ENST00000430200 SEMG2Q02383 582 aa11.95□□□□□ -0.5
HDAC4-202ENST00000430200 SLC20A2Q08357 652 aa11.95□□□□□ -0.5
HDAC4-202ENST00000430200 EIF2B5Q13144 721 aaKnown RBP11.95□□□□□ -0.5
HDAC4-202ENST00000430200 TARDBPQ13148 414 aaKnown RBP eCLIP11.95□□□□□ -0.5
HDAC4-202ENST00000430200 MAMLD1Q13495 774 aa11.95□□□□□ -0.5
HDAC4-202ENST00000430200 SERINC3Q13530 473 aa11.95□□□□□ -0.5
HDAC4-202ENST00000430200 IQCB1Q15051 598 aa11.95□□□□□ -0.5
HDAC4-202ENST00000430200 CYTH1Q15438 398 aa11.95□□□□□ -0.5
HDAC4-202ENST00000430200 ZNF805Q5CZA5 627 aa11.95□□□□□ -0.5
HDAC4-202ENST00000430200 EFHC2Q5JST6 749 aa11.95□□□□□ -0.5
HDAC4-202ENST00000430200 PLEKHA7Q6IQ23 1121 aa11.95□□□□□ -0.5
HDAC4-202ENST00000430200 KIAA1161Q6NSJ0 714 aa11.95□□□□□ -0.5
HDAC4-202ENST00000430200 CAVIN1Q6NZI2 390 aaKnown RBP11.95□□□□□ -0.5
HDAC4-202ENST00000430200 ARHGAP12Q8IWW6 846 aa11.95□□□□□ -0.5
HDAC4-202ENST00000430200 GALNT15Q8N3T1 639 aa11.95□□□□□ -0.5
HDAC4-202ENST00000430200 RYBPQ8N488 228 aaPredicted RBP11.95□□□□□ -0.5
HDAC4-202ENST00000430200 ZNF548Q8NEK5 533 aaPredicted RBP11.95□□□□□ -0.5
HDAC4-202ENST00000430200 SKA1Q96BD8 255 aa11.95□□□□□ -0.5
HDAC4-202ENST00000430200 SLC17A9Q9BYT1 436 aa11.95□□□□□ -0.5
HDAC4-202ENST00000430200 MBNL1Q9NR56 388 aaKnown RBP11.95□□□□□ -0.5
HDAC4-202ENST00000430200 KLHL11Q9NVR0 708 aa11.95□□□□□ -0.5
HDAC4-202ENST00000430200 AP4E1Q9UPM8 1137 aa11.95□□□□□ -0.5
HDAC4-202ENST00000430200 PCDHB1Q9Y5F3 818 aa11.95□□□□□ -0.5
HDAC4-202ENST00000430200 A0A1B0GTH6 734 aa11.94□□□□□ -0.5
HDAC4-202ENST00000430200 CXorf51AA0A1B0GTR3 108 aa11.94□□□□□ -0.5
HDAC4-202ENST00000430200 WASH4PA8MWX3 477 aa11.94□□□□□ -0.5
HDAC4-202ENST00000430200 MUSKO15146 869 aa11.94□□□□□ -0.5
HDAC4-202ENST00000430200 BUB1O43683 1085 aa11.94□□□□□ -0.5
HDAC4-202ENST00000430200 PRKCGP05129 697 aa11.94□□□□□ -0.5
HDAC4-202ENST00000430200 CKMT2P17540 419 aa11.94□□□□□ -0.5
HDAC4-202ENST00000430200 ACP1P24666 158 aa11.94□□□□□ -0.5
HDAC4-202ENST00000430200 ETFBP38117 255 aa11.94□□□□□ -0.5
HDAC4-202ENST00000430200 PFN3P60673 137 aa11.94□□□□□ -0.5
HDAC4-202ENST00000430200 RPS21P63220 83 aaKnown RBP11.94□□□□□ -0.5
HDAC4-202ENST00000430200 MYLK3Q32MK0 819 aa11.94□□□□□ -0.5
HDAC4-202ENST00000430200 TXNRD3NBQ6F5E7 133 aa11.94□□□□□ -0.5
HDAC4-202ENST00000430200 TMPRSS12Q86WS5 348 aa11.94□□□□□ -0.5
HDAC4-202ENST00000430200 CPNE8Q86YQ8 564 aa11.94□□□□□ -0.5
HDAC4-202ENST00000430200 PLPP6Q8IY26 295 aa11.94□□□□□ -0.5
HDAC4-202ENST00000430200 UMODL1-AS1Q8N2C9 162 aa11.94□□□□□ -0.5
HDAC4-202ENST00000430200 TP53I13Q8NBR0 393 aaPredicted RBP11.94□□□□□ -0.5
HDAC4-202ENST00000430200 RFFLQ8WZ73 363 aa11.94□□□□□ -0.5
HDAC4-202ENST00000430200 BBC3Q96PG8 261 aaPredicted RBP11.94□□□□□ -0.5
HDAC4-202ENST00000430200 BPIFA3Q9BQP9 254 aa11.94□□□□□ -0.5
HDAC4-202ENST00000430200 WRAP53Q9BUR4 548 aaKnown RBP11.94□□□□□ -0.5
HDAC4-202ENST00000430200 HAUS4Q9H6D7 363 aa11.94□□□□□ -0.5
HDAC4-202ENST00000430200 DNAJC28Q9NX36 388 aa11.94□□□□□ -0.5
HDAC4-202ENST00000430200 COQ6Q9Y2Z9 468 aa11.94□□□□□ -0.5
HDAC4-202ENST00000430200 SPTY2D1-AS1A0A0U1RR47 76 aa11.93□□□□□ -0.5
HDAC4-202ENST00000430200 A0A1W2PNU3 283 aaPredicted RBP11.93□□□□□ -0.5
HDAC4-202ENST00000430200 TSPAN11A1L157 253 aa11.93□□□□□ -0.5
HDAC4-202ENST00000430200 PMS2P1A4D2B8 440 aa11.93□□□□□ -0.5
HDAC4-202ENST00000430200 TMEM191CA6NGB0 347 aa11.93□□□□□ -0.5
HDAC4-202ENST00000430200 BUB1BO60566 1050 aaPredicted RBP11.93□□□□□ -0.5
HDAC4-202ENST00000430200 MMP20O60882 483 aa11.93□□□□□ -0.5
HDAC4-202ENST00000430200 LRCH4O75427 683 aa11.93□□□□□ -0.5
HDAC4-202ENST00000430200 SKILP12757 684 aa11.93□□□□□ -0.5
HDAC4-202ENST00000430200 NME1P15531 152 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms