RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 DENND4AQ7Z401 1863 aa11.59□□□□□ -0.55
CECR3-201ENST00000428828 NUP210Q8TEM1 1887 aaPredicted RBP11.59□□□□□ -0.55
CECR3-201ENST00000428828 A0A1W2PRU2 124 aa11.58□□□□□ -0.55
CECR3-201ENST00000428828 FAM92AA1XBS5 289 aa11.58□□□□□ -0.55
CECR3-201ENST00000428828 ZNF701M0R085 212 aaPredicted RBP11.58□□□□□ -0.55
CECR3-201ENST00000428828 NRG2O14511 850 aaPredicted RBP11.58□□□□□ -0.55
CECR3-201ENST00000428828 MDM4O15151 490 aa11.58□□□□□ -0.55
CECR3-201ENST00000428828 C1RP00736 705 aa11.58□□□□□ -0.55
CECR3-201ENST00000428828 RHOP08100 348 aa11.58□□□□□ -0.55
CECR3-201ENST00000428828 FOSL2P15408 326 aa11.58□□□□□ -0.55
CECR3-201ENST00000428828 PDGFRAP16234 1089 aa11.58□□□□□ -0.55
CECR3-201ENST00000428828 TFE3P19532 575 aaPredicted RBP11.58□□□□□ -0.55
CECR3-201ENST00000428828 GPD1P21695 349 aa11.58□□□□□ -0.55
CECR3-201ENST00000428828 PSMA2P25787 234 aa11.58□□□□□ -0.55
CECR3-201ENST00000428828 HOXA9P31269 272 aa11.58□□□□□ -0.55
CECR3-201ENST00000428828 TMED10P49755 219 aaKnown RBP11.58□□□□□ -0.55
CECR3-201ENST00000428828 SULT1E1P49888 294 aa11.58□□□□□ -0.55
CECR3-201ENST00000428828 PITX1P78337 314 aaPredicted RBP11.58□□□□□ -0.55
CECR3-201ENST00000428828 COG7P83436 770 aa11.58□□□□□ -0.55
CECR3-201ENST00000428828 DLX2Q07687 328 aaPredicted RBP11.58□□□□□ -0.55
CECR3-201ENST00000428828 DLG1Q12959 904 aa11.58□□□□□ -0.55
CECR3-201ENST00000428828 ZBTB17Q13105 803 aa11.58□□□□□ -0.55
CECR3-201ENST00000428828 PDAP1Q13442 181 aaKnown RBP11.58□□□□□ -0.55
CECR3-201ENST00000428828 C15orf59Q2T9L4 293 aaPredicted RBP11.58□□□□□ -0.55
CECR3-201ENST00000428828 ANKRD54Q6NXT1 300 aa11.58□□□□□ -0.55
CECR3-201ENST00000428828 PDZD4Q76G19 769 aaPredicted RBP11.58□□□□□ -0.55
CECR3-201ENST00000428828 ADAT2Q7Z6V5 191 aaKnown RBP11.58□□□□□ -0.55
CECR3-201ENST00000428828 MON1AQ86VX9 555 aa11.58□□□□□ -0.55
CECR3-201ENST00000428828 CHSY1Q86X52 802 aa11.58□□□□□ -0.55
CECR3-201ENST00000428828 ICA1LQ8NDH6 482 aa11.58□□□□□ -0.55
CECR3-201ENST00000428828 TCEAL4Q96EI5 215 aa11.58□□□□□ -0.55
CECR3-201ENST00000428828 MYRFLQ96LU7 910 aa11.58□□□□□ -0.55
CECR3-201ENST00000428828 GCNAQ96QF7 691 aa11.58□□□□□ -0.55
CECR3-201ENST00000428828 TTC1Q99614 292 aa11.58□□□□□ -0.55
CECR3-201ENST00000428828 ATXN3LQ9H3M9 355 aa11.58□□□□□ -0.55
CECR3-201ENST00000428828 CCSER2Q9H7U1 834 aa11.58□□□□□ -0.55
CECR3-201ENST00000428828 COMMD8Q9NX08 183 aa11.58□□□□□ -0.55
CECR3-201ENST00000428828 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.58□□□□□ -0.55
CECR3-201ENST00000428828 SORCS3Q9UPU3 1222 aa11.58□□□□□ -0.55
CECR3-201ENST00000428828 NEU2Q9Y3R4 380 aa11.58□□□□□ -0.55
CECR3-201ENST00000428828 PRUNE2Q8WUY3 3088 aa11.58□□□□□ -0.56
CECR3-201ENST00000428828 FUOMA2VDF0 154 aa11.58□□□□□ -0.56
CECR3-201ENST00000428828 C2orf78A6NCI8 922 aa11.58□□□□□ -0.56
CECR3-201ENST00000428828 TMEM191CA6NGB0 347 aa11.58□□□□□ -0.56
CECR3-201ENST00000428828 B2RBV5 119 aa11.58□□□□□ -0.56
CECR3-201ENST00000428828 CCNT2O60583 730 aaKnown RBP11.58□□□□□ -0.56
CECR3-201ENST00000428828 PGM3O95394 542 aa11.58□□□□□ -0.56
CECR3-201ENST00000428828 BAG2O95816 211 aa11.58□□□□□ -0.56
CECR3-201ENST00000428828 FYNP06241 537 aa11.58□□□□□ -0.56
CECR3-201ENST00000428828 SDC4P31431 198 aa11.58□□□□□ -0.56
CECR3-201ENST00000428828 CCR2P41597 374 aa11.58□□□□□ -0.56
CECR3-201ENST00000428828 TRPC1P48995 793 aa11.58□□□□□ -0.56
CECR3-201ENST00000428828 VCPP55072 806 aaKnown RBP11.58□□□□□ -0.56
CECR3-201ENST00000428828 FOLH1Q04609 750 aa11.58□□□□□ -0.56
CECR3-201ENST00000428828 ZBTB16Q05516 673 aa11.58□□□□□ -0.56
CECR3-201ENST00000428828 ZNF252P-AS1Q0IIN9 211 aa11.58□□□□□ -0.56
CECR3-201ENST00000428828 ADAM15Q13444 863 aa11.58□□□□□ -0.56
CECR3-201ENST00000428828 TMED2Q15363 201 aa11.58□□□□□ -0.56
CECR3-201ENST00000428828 SKIV2LQ15477 1246 aaKnown RBP11.58□□□□□ -0.56
CECR3-201ENST00000428828 TGFBIQ15582 683 aa11.58□□□□□ -0.56
CECR3-201ENST00000428828 SLC1A5Q15758 541 aa11.58□□□□□ -0.56
CECR3-201ENST00000428828 RAB6CQ53S08 254 aa11.58□□□□□ -0.56
CECR3-201ENST00000428828 STXBP5Q5T5C0 1151 aa11.58□□□□□ -0.56
CECR3-201ENST00000428828 OGFRL1Q5TC84 451 aaPredicted RBP11.58□□□□□ -0.56
CECR3-201ENST00000428828 SH3PXD2AQ5TCZ1 1133 aa11.58□□□□□ -0.56
CECR3-201ENST00000428828 C1orf146Q5VVC0 180 aa11.58□□□□□ -0.56
CECR3-201ENST00000428828 GAREM2Q75VX8 874 aa11.58□□□□□ -0.56
CECR3-201ENST00000428828 RTL10Q7L3V2 364 aa11.58□□□□□ -0.56
CECR3-201ENST00000428828 TMEM150AQ86TG1 271 aa11.58□□□□□ -0.56
CECR3-201ENST00000428828 CPNE8Q86YQ8 564 aa11.58□□□□□ -0.56
CECR3-201ENST00000428828 SCML4Q8N228 414 aa11.58□□□□□ -0.56
CECR3-201ENST00000428828 PDZD8Q8NEN9 1154 aa11.58□□□□□ -0.56
CECR3-201ENST00000428828 RFWD2Q8NHY2 731 aa11.58□□□□□ -0.56
CECR3-201ENST00000428828 GIPC3Q8TF64 312 aa11.58□□□□□ -0.56
CECR3-201ENST00000428828 RNF139Q8WU17 664 aa11.58□□□□□ -0.56
CECR3-201ENST00000428828 ING5Q8WYH8 240 aa11.58□□□□□ -0.56
CECR3-201ENST00000428828 GUCD1Q96NT3 240 aa11.58□□□□□ -0.56
CECR3-201ENST00000428828 LRRC3Q9BY71 257 aa11.58□□□□□ -0.56
CECR3-201ENST00000428828 KLC2Q9H0B6 622 aa11.58□□□□□ -0.56
CECR3-201ENST00000428828 RAB6CQ9H0N0 254 aa11.58□□□□□ -0.56
CECR3-201ENST00000428828 KCNK13Q9HB14 408 aa11.58□□□□□ -0.56
CECR3-201ENST00000428828 IL21Q9HBE4 155 aa11.58□□□□□ -0.56
CECR3-201ENST00000428828 ABCC13Q9NSE7 274 aa11.58□□□□□ -0.56
CECR3-201ENST00000428828 TBC1D23Q9NUY8 699 aa11.58□□□□□ -0.56
CECR3-201ENST00000428828 ASNSD1Q9NWL6 643 aa11.58□□□□□ -0.56
CECR3-201ENST00000428828 RSL24D1Q9UHA3 163 aaKnown RBP11.58□□□□□ -0.56
CECR3-201ENST00000428828 ZNF840PA6NDX5 716 aa11.57□□□□□ -0.56
CECR3-201ENST00000428828 C2CD4BA6NLJ0 364 aa11.57□□□□□ -0.56
CECR3-201ENST00000428828 SPECC1L-ADORA2AF8WAN1 911 aa11.57□□□□□ -0.56
CECR3-201ENST00000428828 KLF11O14901 512 aa11.57□□□□□ -0.56
CECR3-201ENST00000428828 LSM1O15116 133 aaKnown RBP11.57□□□□□ -0.56
CECR3-201ENST00000428828 TBX18O95935 607 aa11.57□□□□□ -0.56
CECR3-201ENST00000428828 F11P03951 625 aa11.57□□□□□ -0.56
CECR3-201ENST00000428828 DLDP09622 509 aaKnown RBP11.57□□□□□ -0.56
CECR3-201ENST00000428828 POU3F3P20264 500 aaPredicted RBP11.57□□□□□ -0.56
CECR3-201ENST00000428828 CA4P22748 312 aa11.57□□□□□ -0.56
CECR3-201ENST00000428828 GCAP28676 217 aa11.57□□□□□ -0.56
CECR3-201ENST00000428828 PCSK6P29122 969 aa11.57□□□□□ -0.56
CECR3-201ENST00000428828 RPA3P35244 121 aaPredicted RBP11.57□□□□□ -0.56
CECR3-201ENST00000428828 SCNN1AP37088 669 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms