RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 MLLT3P42568 568 aaPredicted RBP18.61■□□□□ 0.57
UPK3BP1-201ENST00000428678 SPIDRQ14159 915 aa18.61■□□□□ 0.57
UPK3BP1-201ENST00000428678 PTK2BQ14289 1009 aa18.61■□□□□ 0.57
UPK3BP1-201ENST00000428678 PRICKLE2Q7Z3G6 844 aa18.61■□□□□ 0.57
UPK3BP1-201ENST00000428678 CLEC14AQ86T13 490 aa18.61■□□□□ 0.57
UPK3BP1-201ENST00000428678 PHACTR4Q8IZ21 702 aa18.61■□□□□ 0.57
UPK3BP1-201ENST00000428678 WDR48Q8TAF3 677 aa18.61■□□□□ 0.57
UPK3BP1-201ENST00000428678 RAB7BQ96AH8 199 aa18.61■□□□□ 0.57
UPK3BP1-201ENST00000428678 CCDC3Q9BQI4 270 aa18.61■□□□□ 0.57
UPK3BP1-201ENST00000428678 LRRC61Q9BV99 259 aa18.61■□□□□ 0.57
UPK3BP1-201ENST00000428678 SLC13A1Q9BZW2 595 aa18.61■□□□□ 0.57
UPK3BP1-201ENST00000428678 ZYG11BQ9C0D3 744 aa18.61■□□□□ 0.57
UPK3BP1-201ENST00000428678 PDCL3Q9H2J4 239 aa18.61■□□□□ 0.57
UPK3BP1-201ENST00000428678 ZNF212Q9UDV6 495 aa18.61■□□□□ 0.57
UPK3BP1-201ENST00000428678 AJAP1Q9UKB5 411 aaPredicted RBP18.61■□□□□ 0.57
UPK3BP1-201ENST00000428678 CYSRT1A8MQ03 144 aa18.6■□□□□ 0.57
UPK3BP1-201ENST00000428678 LMO7DNF2Z398 122 aa18.6■□□□□ 0.57
UPK3BP1-201ENST00000428678 PON1P27169 355 aa18.6■□□□□ 0.57
UPK3BP1-201ENST00000428678 CLCN1P35523 988 aa18.6■□□□□ 0.57
UPK3BP1-201ENST00000428678 ZNF805Q5CZA5 627 aa18.6■□□□□ 0.57
UPK3BP1-201ENST00000428678 C6orf132Q5T0Z8 1188 aa18.6■□□□□ 0.57
UPK3BP1-201ENST00000428678 ARTNQ5T4W7 220 aa18.6■□□□□ 0.57
UPK3BP1-201ENST00000428678 FAXCQ5TGI0 409 aa18.6■□□□□ 0.57
UPK3BP1-201ENST00000428678 VPS36Q86VN1 386 aa18.6■□□□□ 0.57
UPK3BP1-201ENST00000428678 TMEM35BQ8NCS4 154 aa18.6■□□□□ 0.57
UPK3BP1-201ENST00000428678 ASB12Q8WXK4 309 aa18.6■□□□□ 0.57
UPK3BP1-201ENST00000428678 HAPLN3Q96S86 360 aa18.6■□□□□ 0.57
UPK3BP1-201ENST00000428678 CCNL2Q96S94 520 aaPredicted RBP18.6■□□□□ 0.57
UPK3BP1-201ENST00000428678 TMEM51Q9NW97 253 aa18.6■□□□□ 0.57
UPK3BP1-201ENST00000428678 PADI4Q9UM07 663 aa18.6■□□□□ 0.57
UPK3BP1-201ENST00000428678 COL12A1Q99715 3063 aa18.6■□□□□ 0.57
UPK3BP1-201ENST00000428678 FOXN3O00409 490 aaPredicted RBP18.59■□□□□ 0.57
UPK3BP1-201ENST00000428678 KRIT1O00522 736 aa18.59■□□□□ 0.57
UPK3BP1-201ENST00000428678 UGT2B4P06133 528 aa18.59■□□□□ 0.57
UPK3BP1-201ENST00000428678 ITGA2BP08514 1039 aa18.59■□□□□ 0.57
UPK3BP1-201ENST00000428678 IGFALSP35858 605 aa18.59■□□□□ 0.57
UPK3BP1-201ENST00000428678 FLT3P36888 993 aa18.59■□□□□ 0.57
UPK3BP1-201ENST00000428678 ACVRL1P37023 503 aa18.59■□□□□ 0.57
UPK3BP1-201ENST00000428678 PDX1P52945 283 aa18.59■□□□□ 0.57
UPK3BP1-201ENST00000428678 ESRP1Q6NXG1 681 aaKnown RBP18.59■□□□□ 0.57
UPK3BP1-201ENST00000428678 FAM131BQ86XD5 332 aa18.59■□□□□ 0.57
UPK3BP1-201ENST00000428678 ISG20Q96AZ6 181 aaKnown RBP18.59■□□□□ 0.57
UPK3BP1-201ENST00000428678 C18orf8Q96DM3 657 aa18.59■□□□□ 0.57
UPK3BP1-201ENST00000428678 ARHGEF26Q96DR7 871 aa18.59■□□□□ 0.57
UPK3BP1-201ENST00000428678 GULP1Q9UBP9 304 aa18.59■□□□□ 0.57
UPK3BP1-201ENST00000428678 DNAJC12Q9UKB3 198 aa18.59■□□□□ 0.57
UPK3BP1-201ENST00000428678 PNMA8BQ9ULN7 279 aaPredicted RBP18.59■□□□□ 0.57
UPK3BP1-201ENST00000428678 DOLKQ9UPQ8 538 aa18.59■□□□□ 0.57
UPK3BP1-201ENST00000428678 UBR5O95071 2799 aaPredicted RBP18.59■□□□□ 0.57
UPK3BP1-201ENST00000428678 GTPBP10A4D1E9 387 aaKnown RBP18.58■□□□□ 0.56
UPK3BP1-201ENST00000428678 GOLGA8SH3BPF8 625 aa18.58■□□□□ 0.56
UPK3BP1-201ENST00000428678 YY2O15391 372 aa18.58■□□□□ 0.56
UPK3BP1-201ENST00000428678 ARHGAP6O43182 974 aa18.58■□□□□ 0.56
UPK3BP1-201ENST00000428678 WISP1O95388 367 aa18.58■□□□□ 0.56
UPK3BP1-201ENST00000428678 CD160O95971 181 aa18.58■□□□□ 0.56
UPK3BP1-201ENST00000428678 TSHRP16473 764 aa18.58■□□□□ 0.56
UPK3BP1-201ENST00000428678 SCNN1AP37088 669 aa18.58■□□□□ 0.56
UPK3BP1-201ENST00000428678 POLD3Q15054 466 aaPredicted RBP18.58■□□□□ 0.56
UPK3BP1-201ENST00000428678 ARL13BQ3SXY8 428 aa18.58■□□□□ 0.56
UPK3BP1-201ENST00000428678 LRRC73Q5JTD7 316 aa18.58■□□□□ 0.56
UPK3BP1-201ENST00000428678 XYLT1Q86Y38 959 aa18.58■□□□□ 0.56
UPK3BP1-201ENST00000428678 JAMLQ86YT9 394 aa18.58■□□□□ 0.56
UPK3BP1-201ENST00000428678 CENPTQ96BT3 561 aa18.58■□□□□ 0.56
UPK3BP1-201ENST00000428678 TBATAQ96M53 351 aa18.58■□□□□ 0.56
UPK3BP1-201ENST00000428678 CLPBQ9H078 707 aa18.58■□□□□ 0.56
UPK3BP1-201ENST00000428678 EPB41L5Q9HCM4 733 aa18.58■□□□□ 0.56
UPK3BP1-201ENST00000428678 ATXN7L1Q9ULK2 861 aaPredicted RBP18.58■□□□□ 0.56
UPK3BP1-201ENST00000428678 HEMK1Q9Y5R4 338 aaPredicted RBP18.58■□□□□ 0.56
UPK3BP1-201ENST00000428678 UNC13CQ8NB66 2214 aa18.57■□□□□ 0.56
UPK3BP1-201ENST00000428678 PLD2O14939 933 aa18.57■□□□□ 0.56
UPK3BP1-201ENST00000428678 CELA2BP08218 269 aaPredicted RBP18.57■□□□□ 0.56
UPK3BP1-201ENST00000428678 ETFBP38117 255 aa18.57■□□□□ 0.56
UPK3BP1-201ENST00000428678 GABRB2P47870 512 aa18.57■□□□□ 0.56
UPK3BP1-201ENST00000428678 BPIFB4P59827 614 aa18.57■□□□□ 0.56
UPK3BP1-201ENST00000428678 YPEL5P62699 121 aa18.57■□□□□ 0.56
UPK3BP1-201ENST00000428678 PPARDQ03181 441 aa18.57■□□□□ 0.56
UPK3BP1-201ENST00000428678 NFATC3Q12968 1075 aa18.57■□□□□ 0.56
UPK3BP1-201ENST00000428678 TCEA2Q15560 299 aa18.57■□□□□ 0.56
UPK3BP1-201ENST00000428678 C2CD6Q53TS8 623 aa18.57■□□□□ 0.56
UPK3BP1-201ENST00000428678 LEKR1Q6ZMV7 388 aa18.57■□□□□ 0.56
UPK3BP1-201ENST00000428678 MACC1Q6ZN28 852 aa18.57■□□□□ 0.56
UPK3BP1-201ENST00000428678 B3GNT8Q7Z7M8 397 aa18.57■□□□□ 0.56
UPK3BP1-201ENST00000428678 PLPP6Q8IY26 295 aa18.57■□□□□ 0.56
UPK3BP1-201ENST00000428678 OR2AP1Q8NGE2 309 aa18.57■□□□□ 0.56
UPK3BP1-201ENST00000428678 LIN37Q96GY3 246 aaPredicted RBP18.57■□□□□ 0.56
UPK3BP1-201ENST00000428678 CFAP57Q96MR6 1250 aa18.57■□□□□ 0.56
UPK3BP1-201ENST00000428678 KLHL32Q96NJ5 620 aa18.57■□□□□ 0.56
UPK3BP1-201ENST00000428678 C1QTNF7Q9BXJ2 289 aa18.57■□□□□ 0.56
UPK3BP1-201ENST00000428678 SIX2Q9NPC8 291 aa18.57■□□□□ 0.56
UPK3BP1-201ENST00000428678 SIRPGQ9P1W8 387 aa18.57■□□□□ 0.56
UPK3BP1-201ENST00000428678 PPARGC1AQ9UBK2 798 aaKnown RBP18.57■□□□□ 0.56
UPK3BP1-201ENST00000428678 FLNCQ14315 2725 aa18.57■□□□□ 0.56
UPK3BP1-201ENST00000428678 CHD5Q8TDI0 1954 aa18.56■□□□□ 0.56
UPK3BP1-201ENST00000428678 NTN3O00634 580 aaPredicted RBP18.56■□□□□ 0.56
UPK3BP1-201ENST00000428678 MMP20O60882 483 aa18.56■□□□□ 0.56
UPK3BP1-201ENST00000428678 GSRP00390 522 aa18.56■□□□□ 0.56
UPK3BP1-201ENST00000428678 SLC5A2P31639 672 aa18.56■□□□□ 0.56
UPK3BP1-201ENST00000428678 EIF4A3P38919 411 aaKnown RBP18.56■□□□□ 0.56
UPK3BP1-201ENST00000428678 MTIF2P46199 727 aaKnown RBP18.56■□□□□ 0.56
UPK3BP1-201ENST00000428678 GEMIN4P57678 1058 aaKnown RBP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms