RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 NOMO3P69849 1222 aa16.81■□□□□ 0.28
VARS-216ENST00000428445 LY6DQ14210 128 aa16.81■□□□□ 0.28
VARS-216ENST00000428445 CCDC14Q49A88 953 aa16.81■□□□□ 0.28
VARS-216ENST00000428445 ZCCHC8Q6NZY4 707 aaKnown RBP16.81■□□□□ 0.28
VARS-216ENST00000428445 ZNF783Q6ZMS7 281 aa16.81■□□□□ 0.28
VARS-216ENST00000428445 VPS36Q86VN1 386 aa16.81■□□□□ 0.28
VARS-216ENST00000428445 JOSD2Q8TAC2 188 aa16.81■□□□□ 0.28
VARS-216ENST00000428445 SLC30A5Q8TAD4 765 aa16.81■□□□□ 0.28
VARS-216ENST00000428445 GPT2Q8TD30 523 aa16.81■□□□□ 0.28
VARS-216ENST00000428445 KCNE4Q8WWG9 221 aa16.81■□□□□ 0.28
VARS-216ENST00000428445 RXFP2Q8WXD0 754 aa16.81■□□□□ 0.28
VARS-216ENST00000428445 PRR11Q96HE9 360 aaPredicted RBP16.81■□□□□ 0.28
VARS-216ENST00000428445 LENG8Q96PV6 779 aaPredicted RBP16.81■□□□□ 0.28
VARS-216ENST00000428445 MBNL1Q9NR56 388 aaKnown RBP16.81■□□□□ 0.28
VARS-216ENST00000428445 PPARGC1AQ9UBK2 798 aaKnown RBP16.81■□□□□ 0.28
VARS-216ENST00000428445 OR12D3Q9UGF7 316 aa16.81■□□□□ 0.28
VARS-216ENST00000428445 H3BM21 787 aa16.8■□□□□ 0.28
VARS-216ENST00000428445 DXOO77932 396 aaKnown RBP16.8■□□□□ 0.28
VARS-216ENST00000428445 ADRA1BP35368 520 aa16.8■□□□□ 0.28
VARS-216ENST00000428445 IGFALSP35858 605 aa16.8■□□□□ 0.28
VARS-216ENST00000428445 SCNN1AP37088 669 aa16.8■□□□□ 0.28
VARS-216ENST00000428445 KLK7P49862 253 aa16.8■□□□□ 0.28
VARS-216ENST00000428445 MYLK3Q32MK0 819 aa16.8■□□□□ 0.28
VARS-216ENST00000428445 DPCR1Q3MIW9 517 aa16.8■□□□□ 0.28
VARS-216ENST00000428445 ZNF805Q5CZA5 627 aa16.8■□□□□ 0.28
VARS-216ENST00000428445 PRRT3Q5FWE3 981 aa16.8■□□□□ 0.28
VARS-216ENST00000428445 NLRP14Q86W24 1093 aa16.8■□□□□ 0.28
VARS-216ENST00000428445 CCDC185Q8N715 623 aa16.8■□□□□ 0.28
VARS-216ENST00000428445 CENPTQ96BT3 561 aa16.8■□□□□ 0.28
VARS-216ENST00000428445 IL12RB2Q99665 862 aa16.8■□□□□ 0.28
VARS-216ENST00000428445 CLPBQ9H078 707 aa16.8■□□□□ 0.28
VARS-216ENST00000428445 KLC2Q9H0B6 622 aa16.8■□□□□ 0.28
VARS-216ENST00000428445 SAMSN1Q9NSI8 373 aaKnown RBP16.8■□□□□ 0.28
VARS-216ENST00000428445 NEU3Q9UQ49 428 aa16.8■□□□□ 0.28
VARS-216ENST00000428445 LRRK1Q38SD2 2015 aa16.8■□□□□ 0.28
VARS-216ENST00000428445 ZNF462Q96JM2 2506 aa16.79■□□□□ 0.28
VARS-216ENST00000428445 EME2A4GXA9 379 aaPredicted RBP16.79■□□□□ 0.28
VARS-216ENST00000428445 TSPAN6O43657 245 aa16.79■□□□□ 0.28
VARS-216ENST00000428445 GFPT2O94808 682 aa16.79■□□□□ 0.28
VARS-216ENST00000428445 UCHL3P15374 230 aa16.79■□□□□ 0.28
VARS-216ENST00000428445 CHRNB2P17787 502 aa16.79■□□□□ 0.28
VARS-216ENST00000428445 TMPRSS3P57727 454 aa16.79■□□□□ 0.28
VARS-216ENST00000428445 NR0B2Q15466 257 aa16.79■□□□□ 0.28
VARS-216ENST00000428445 MANEALQ5VSG8 457 aa16.79■□□□□ 0.28
VARS-216ENST00000428445 BROXQ5VW32 411 aa16.79■□□□□ 0.28
VARS-216ENST00000428445 TTC7BQ86TV6 843 aa16.79■□□□□ 0.28
VARS-216ENST00000428445 FAM114A1Q8IWE2 563 aa16.79■□□□□ 0.28
VARS-216ENST00000428445 SLC35F3Q8IY50 421 aa16.79■□□□□ 0.28
VARS-216ENST00000428445 LSMEM2Q8N112 164 aa16.79■□□□□ 0.28
VARS-216ENST00000428445 PYROXD2Q8N2H3 581 aa16.79■□□□□ 0.28
VARS-216ENST00000428445 LSM14AQ8ND56 463 aaKnown RBP16.79■□□□□ 0.28
VARS-216ENST00000428445 FAM174AQ8TBP5 190 aa16.79■□□□□ 0.28
VARS-216ENST00000428445 EPS8L1Q8TE68 723 aa16.79■□□□□ 0.28
VARS-216ENST00000428445 SLC46A1Q96NT5 459 aa16.79■□□□□ 0.28
VARS-216ENST00000428445 WRAP53Q9BUR4 548 aaKnown RBP16.79■□□□□ 0.28
VARS-216ENST00000428445 SYNDIG1Q9H7V2 258 aa16.79■□□□□ 0.28
VARS-216ENST00000428445 SALL4Q9UJQ4 1053 aa16.79■□□□□ 0.28
VARS-216ENST00000428445 COQ6Q9Y2Z9 468 aa16.79■□□□□ 0.28
VARS-216ENST00000428445 CSNK1G3Q9Y6M4 447 aa16.79■□□□□ 0.28
VARS-216ENST00000428445 AGRPO00253 132 aa16.78■□□□□ 0.28
VARS-216ENST00000428445 INSIG1O15503 277 aa16.78■□□□□ 0.28
VARS-216ENST00000428445 LRIG2O94898 1065 aa16.78■□□□□ 0.28
VARS-216ENST00000428445 ERVPABLB-1P60509 514 aa16.78■□□□□ 0.28
VARS-216ENST00000428445 FAXCQ5TGI0 409 aa16.78■□□□□ 0.28
VARS-216ENST00000428445 KIAA1614Q5VZ46 1190 aa16.78■□□□□ 0.28
VARS-216ENST00000428445 ZNF354CQ86Y25 554 aa16.78■□□□□ 0.28
VARS-216ENST00000428445 PHACTR4Q8IZ21 702 aa16.78■□□□□ 0.28
VARS-216ENST00000428445 OR2AP1Q8NGE2 309 aa16.78■□□□□ 0.28
VARS-216ENST00000428445 ISG20Q96AZ6 181 aaKnown RBP16.78■□□□□ 0.28
VARS-216ENST00000428445 C11orf70Q9BRQ4 267 aa16.78■□□□□ 0.28
VARS-216ENST00000428445 LRRC61Q9BV99 259 aa16.78■□□□□ 0.28
VARS-216ENST00000428445 BOCQ9BWV1 1114 aa16.78■□□□□ 0.28
VARS-216ENST00000428445 USP29Q9HBJ7 922 aa16.78■□□□□ 0.28
VARS-216ENST00000428445 WDR70Q9NW82 654 aa16.78■□□□□ 0.28
VARS-216ENST00000428445 SPASTQ9UBP0 616 aa16.78■□□□□ 0.28
VARS-216ENST00000428445 APOBEC3BQ9UH17 382 aaKnown RBP16.78■□□□□ 0.28
VARS-216ENST00000428445 FLNBO75369 2602 aaKnown RBP16.78■□□□□ 0.28
VARS-216ENST00000428445 TENM4Q6N022 2769 aa16.77■□□□□ 0.28
VARS-216ENST00000428445 CXorf51AA0A1B0GTR3 108 aa16.77■□□□□ 0.28
VARS-216ENST00000428445 F8VZ95 297 aa16.77■□□□□ 0.28
VARS-216ENST00000428445 ERVH48-1M5A8F1 160 aa16.77■□□□□ 0.28
VARS-216ENST00000428445 AREL1O15033 823 aa16.77■□□□□ 0.28
VARS-216ENST00000428445 YY2O15391 372 aa16.77■□□□□ 0.28
VARS-216ENST00000428445 BUB1O43683 1085 aa16.77■□□□□ 0.28
VARS-216ENST00000428445 POP4O95707 220 aaKnown RBP16.77■□□□□ 0.28
VARS-216ENST00000428445 PLEKP08567 350 aaPredicted RBP16.77■□□□□ 0.28
VARS-216ENST00000428445 TIMP2P16035 220 aa16.77■□□□□ 0.28
VARS-216ENST00000428445 TSHRP16473 764 aa16.77■□□□□ 0.28
VARS-216ENST00000428445 RHOQP17081 205 aa16.77■□□□□ 0.28
VARS-216ENST00000428445 RBMS1P29558 406 aaKnown RBP16.77■□□□□ 0.28
VARS-216ENST00000428445 EIF4A3P38919 411 aaKnown RBP16.77■□□□□ 0.28
VARS-216ENST00000428445 THOP1P52888 689 aa16.77■□□□□ 0.28
VARS-216ENST00000428445 SNRPD1P62314 119 aaKnown RBP16.77■□□□□ 0.28
VARS-216ENST00000428445 POLD3Q15054 466 aaPredicted RBP16.77■□□□□ 0.28
VARS-216ENST00000428445 KLHL40Q2TBA0 621 aa16.77■□□□□ 0.28
VARS-216ENST00000428445 CT47A1Q5JQC4 288 aaPredicted RBP16.77■□□□□ 0.28
VARS-216ENST00000428445 GDPD4Q6W3E5 623 aa16.77■□□□□ 0.28
VARS-216ENST00000428445 ARCQ7LC44 396 aa16.77■□□□□ 0.28
VARS-216ENST00000428445 PLPP6Q8IY26 295 aa16.77■□□□□ 0.28
VARS-216ENST00000428445 TSACCQ96A04 125 aaPredicted RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms