RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 UMODL1-AS1Q8N2C9 162 aa18.67■□□□□ 0.58
PSPC1-202ENST00000427943 LRIG1Q96JA1 1093 aa18.67■□□□□ 0.58
PSPC1-202ENST00000427943 FEM1CQ96JP0 617 aa18.67■□□□□ 0.58
PSPC1-202ENST00000427943 KCTD15Q96SI1 283 aaPredicted RBP18.67■□□□□ 0.58
PSPC1-202ENST00000427943 SLC17A9Q9BYT1 436 aa18.67■□□□□ 0.58
PSPC1-202ENST00000427943 EDEM3Q9BZQ6 932 aa18.67■□□□□ 0.58
PSPC1-202ENST00000427943 LHX3Q9UBR4 397 aa18.67■□□□□ 0.58
PSPC1-202ENST00000427943 DMXL2Q8TDJ6 3036 aa18.66■□□□□ 0.58
PSPC1-202ENST00000427943 CFAP47Q6ZTR5 3102 aa18.66■□□□□ 0.58
PSPC1-202ENST00000427943 FREM2Q5SZK8 3169 aa18.66■□□□□ 0.58
PSPC1-202ENST00000427943 FAM149AA5PLN7 773 aa18.66■□□□□ 0.58
PSPC1-202ENST00000427943 IGLON5A6NGN9 336 aa18.66■□□□□ 0.58
PSPC1-202ENST00000427943 A6NNZ2 444 aa18.66■□□□□ 0.58
PSPC1-202ENST00000427943 NEMP1O14524 444 aa18.66■□□□□ 0.58
PSPC1-202ENST00000427943 RAD51BO15315 384 aa18.66■□□□□ 0.58
PSPC1-202ENST00000427943 RNF8O76064 485 aa18.66■□□□□ 0.58
PSPC1-202ENST00000427943 MIPP30301 263 aa18.66■□□□□ 0.58
PSPC1-202ENST00000427943 CLDN6P56747 220 aa18.66■□□□□ 0.58
PSPC1-202ENST00000427943 FIGNQ5HY92 759 aa18.66■□□□□ 0.58
PSPC1-202ENST00000427943 ERMARDQ5T6L9 678 aa18.66■□□□□ 0.58
PSPC1-202ENST00000427943 KDM7AQ6ZMT4 941 aa18.66■□□□□ 0.58
PSPC1-202ENST00000427943 CYP4V2Q6ZWL3 525 aaPredicted RBP18.66■□□□□ 0.58
PSPC1-202ENST00000427943 ABI3BPQ7Z7G0 1075 aa18.66■□□□□ 0.58
PSPC1-202ENST00000427943 CASKIN2Q8WXE0 1202 aa18.66■□□□□ 0.58
PSPC1-202ENST00000427943 OSBPL1AQ9BXW6 950 aa18.66■□□□□ 0.58
PSPC1-202ENST00000427943 LRRC19Q9H756 370 aa18.66■□□□□ 0.58
PSPC1-202ENST00000427943 UBA2Q9UBT2 640 aaPredicted RBP18.66■□□□□ 0.58
PSPC1-202ENST00000427943 SCINQ9Y6U3 715 aa18.66■□□□□ 0.58
PSPC1-202ENST00000427943 POM121BA6NF01 834 aa18.65■□□□□ 0.58
PSPC1-202ENST00000427943 SRRM3A6NNA2 597 aaPredicted RBP18.65■□□□□ 0.58
PSPC1-202ENST00000427943 J3KR12 359 aa18.65■□□□□ 0.58
PSPC1-202ENST00000427943 INSIG1O15503 277 aa18.65■□□□□ 0.58
PSPC1-202ENST00000427943 TSPAN6O43657 245 aa18.65■□□□□ 0.58
PSPC1-202ENST00000427943 PRPSAP2O60256 369 aa18.65■□□□□ 0.58
PSPC1-202ENST00000427943 LRCH4O75427 683 aa18.65■□□□□ 0.58
PSPC1-202ENST00000427943 PIGNO95427 931 aa18.65■□□□□ 0.58
PSPC1-202ENST00000427943 HTR7P34969 479 aa18.65■□□□□ 0.58
PSPC1-202ENST00000427943 PBX1P40424 430 aa18.65■□□□□ 0.58
PSPC1-202ENST00000427943 ACADVLP49748 655 aa18.65■□□□□ 0.58
PSPC1-202ENST00000427943 UBASH3AP57075 661 aa18.65■□□□□ 0.58
PSPC1-202ENST00000427943 CYTH1Q15438 398 aa18.65■□□□□ 0.58
PSPC1-202ENST00000427943 INO80DQ53TQ3 878 aaPredicted RBP18.65■□□□□ 0.58
PSPC1-202ENST00000427943 PPP6R3Q5H9R7 873 aaPredicted RBP18.65■□□□□ 0.58
PSPC1-202ENST00000427943 HGSNATQ68CP4 663 aa18.65■□□□□ 0.58
PSPC1-202ENST00000427943 Q6ZSR6 202 aa18.65■□□□□ 0.58
PSPC1-202ENST00000427943 GALNT15Q8N3T1 639 aa18.65■□□□□ 0.58
PSPC1-202ENST00000427943 FNIP1Q8TF40 1166 aa18.65■□□□□ 0.58
PSPC1-202ENST00000427943 RAB7BQ96AH8 199 aa18.65■□□□□ 0.58
PSPC1-202ENST00000427943 BMFQ96LC9 184 aa18.65■□□□□ 0.58
PSPC1-202ENST00000427943 NCAPGQ9BPX3 1015 aa18.65■□□□□ 0.58
PSPC1-202ENST00000427943 SLC39A8Q9C0K1 460 aa18.65■□□□□ 0.58
PSPC1-202ENST00000427943 PDFQ9HBH1 243 aa18.65■□□□□ 0.58
PSPC1-202ENST00000427943 UCKL1Q9NWZ5 548 aa18.65■□□□□ 0.58
PSPC1-202ENST00000427943 GOLGA6L19H0YKK7 550 aa18.64■□□□□ 0.57
PSPC1-202ENST00000427943 DAPK3O43293 454 aa18.64■□□□□ 0.57
PSPC1-202ENST00000427943 RFPL3O75679 317 aa18.64■□□□□ 0.57
PSPC1-202ENST00000427943 ERCC2P18074 760 aa18.64■□□□□ 0.57
PSPC1-202ENST00000427943 ITIH2P19823 946 aa18.64■□□□□ 0.57
PSPC1-202ENST00000427943 DGKAP23743 735 aa18.64■□□□□ 0.57
PSPC1-202ENST00000427943 NDST2P52849 883 aa18.64■□□□□ 0.57
PSPC1-202ENST00000427943 RAD51Q06609 339 aa18.64■□□□□ 0.57
PSPC1-202ENST00000427943 SGCGQ13326 291 aa18.64■□□□□ 0.57
PSPC1-202ENST00000427943 ZNF542PQ5EBM4 170 aa18.64■□□□□ 0.57
PSPC1-202ENST00000427943 KYAT3Q6YP21 454 aaKnown RBP18.64■□□□□ 0.57
PSPC1-202ENST00000427943 RFX8Q6ZV50 586 aa18.64■□□□□ 0.57
PSPC1-202ENST00000427943 TTC7BQ86TV6 843 aa18.64■□□□□ 0.57
PSPC1-202ENST00000427943 NPWQ8N729 165 aa18.64■□□□□ 0.57
PSPC1-202ENST00000427943 CPLX3Q8WVH0 158 aa18.64■□□□□ 0.57
PSPC1-202ENST00000427943 TRIM11Q96F44 468 aa18.64■□□□□ 0.57
PSPC1-202ENST00000427943 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.64■□□□□ 0.57
PSPC1-202ENST00000427943 ISCUQ9H1K1 167 aa18.64■□□□□ 0.57
PSPC1-202ENST00000427943 KLHL11Q9NVR0 708 aa18.64■□□□□ 0.57
PSPC1-202ENST00000427943 LRP4O75096 1905 aa18.63■□□□□ 0.57
PSPC1-202ENST00000427943 A0A1W2PQJ5 194 aa18.63■□□□□ 0.57
PSPC1-202ENST00000427943 EIF3CLB5ME19 914 aaKnown RBP18.63■□□□□ 0.57
PSPC1-202ENST00000427943 FFAR2O15552 330 aa18.63■□□□□ 0.57
PSPC1-202ENST00000427943 PRAMEF11O60813 436 aa18.63■□□□□ 0.57
PSPC1-202ENST00000427943 CAPNS1P04632 268 aa18.63■□□□□ 0.57
PSPC1-202ENST00000427943 MYBL1P10243 752 aa18.63■□□□□ 0.57
PSPC1-202ENST00000427943 PAPOLAP51003 745 aaKnown RBP18.63■□□□□ 0.57
PSPC1-202ENST00000427943 SMAD1Q15797 465 aaKnown RBP18.63■□□□□ 0.57
PSPC1-202ENST00000427943 ARHGAP12Q8IWW6 846 aa18.63■□□□□ 0.57
PSPC1-202ENST00000427943 SLC25A45Q8N413 288 aa18.63■□□□□ 0.57
PSPC1-202ENST00000427943 MDM1Q8TC05 714 aa18.63■□□□□ 0.57
PSPC1-202ENST00000427943 TSC1Q92574 1164 aa18.63■□□□□ 0.57
PSPC1-202ENST00000427943 ARHGEF26Q96DR7 871 aa18.63■□□□□ 0.57
PSPC1-202ENST00000427943 KLF6Q99612 283 aaPredicted RBP18.63■□□□□ 0.57
PSPC1-202ENST00000427943 EIF3CQ99613 913 aaKnown RBP18.63■□□□□ 0.57
PSPC1-202ENST00000427943 C1QTNF2Q9BXJ5 285 aa18.63■□□□□ 0.57
PSPC1-202ENST00000427943 MRPL47Q9HD33 250 aaKnown RBP18.63■□□□□ 0.57
PSPC1-202ENST00000427943 DNAJC28Q9NX36 388 aa18.63■□□□□ 0.57
PSPC1-202ENST00000427943 PCDHGA1Q9Y5H4 931 aa18.63■□□□□ 0.57
PSPC1-202ENST00000427943 HS3ST3A1Q9Y663 406 aa18.63■□□□□ 0.57
PSPC1-202ENST00000427943 ARHGAP42A6NI28 874 aa18.62■□□□□ 0.57
PSPC1-202ENST00000427943 TAF4O00268 1085 aa18.62■□□□□ 0.57
PSPC1-202ENST00000427943 DFFAO00273 331 aa18.62■□□□□ 0.57
PSPC1-202ENST00000427943 TRIM38O00635 465 aa18.62■□□□□ 0.57
PSPC1-202ENST00000427943 FPGTO14772 594 aa18.62■□□□□ 0.57
PSPC1-202ENST00000427943 AREL1O15033 823 aa18.62■□□□□ 0.57
PSPC1-202ENST00000427943 SIGLEC6O43699 453 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms