RNA–Protein interactions for RNA: ENST00000426542.6

ARHGEF28-203, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF28, Length 6,118 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-203ENST00000426542 MTAPQ13126 283 aa18.11■□□□□ 0.49
ARHGEF28-203ENST00000426542 LLGL2Q6P1M3 1020 aa18.11■□□□□ 0.49
ARHGEF28-203ENST00000426542 ZNF549Q6P9A3 640 aa18.11■□□□□ 0.49
ARHGEF28-203ENST00000426542 KLHL24Q6TFL4 600 aa18.11■□□□□ 0.49
ARHGEF28-203ENST00000426542 GCNT7Q6ZNI0 430 aa18.11■□□□□ 0.49
ARHGEF28-203ENST00000426542 REXO5Q96IC2 774 aaKnown RBP18.11■□□□□ 0.49
ARHGEF28-203ENST00000426542 ASAH2Q9NR71 780 aa18.11■□□□□ 0.49
ARHGEF28-203ENST00000426542 GSTK1Q9Y2Q3 226 aa18.11■□□□□ 0.49
ARHGEF28-203ENST00000426542 MTF2Q9Y483 593 aaPredicted RBP18.11■□□□□ 0.49
ARHGEF28-203ENST00000426542 LMTK2Q8IWU2 1503 aa18.11■□□□□ 0.49
ARHGEF28-203ENST00000426542 SNRPB2P08579 225 aaKnown RBP18.1■□□□□ 0.49
ARHGEF28-203ENST00000426542 MAPKAPK2P49137 400 aa18.1■□□□□ 0.49
ARHGEF28-203ENST00000426542 TTPAP49638 278 aa18.1■□□□□ 0.49
ARHGEF28-203ENST00000426542 SLC25A3Q00325 362 aa18.1■□□□□ 0.49
ARHGEF28-203ENST00000426542 SLC25A24Q6NUK1 477 aa18.1■□□□□ 0.49
ARHGEF28-203ENST00000426542 PMF1Q6P1K2 205 aa18.1■□□□□ 0.49
ARHGEF28-203ENST00000426542 NKX2-3Q8TAU0 364 aa18.1■□□□□ 0.49
ARHGEF28-203ENST00000426542 MYPNQ86TC9 1320 aa18.1■□□□□ 0.49
ARHGEF28-203ENST00000426542 STX11O75558 287 aa18.1■□□□□ 0.49
ARHGEF28-203ENST00000426542 CATSPERGQ6ZRH7 1159 aa18.1■□□□□ 0.49
ARHGEF28-203ENST00000426542 BPIFB6Q8NFQ5 453 aa18.1■□□□□ 0.49
ARHGEF28-203ENST00000426542 GALNT8Q9NY28 637 aa18.1■□□□□ 0.49
ARHGEF28-203ENST00000426542 SLC27A5Q9Y2P5 690 aa18.1■□□□□ 0.49
ARHGEF28-203ENST00000426542 CCNIQ14094 377 aa18.1■□□□□ 0.49
ARHGEF28-203ENST00000426542 FAM220AQ7Z4H9 259 aa18.1■□□□□ 0.49
ARHGEF28-203ENST00000426542 DENND6AQ8IWF6 608 aa18.1■□□□□ 0.49
ARHGEF28-203ENST00000426542 GPR156Q8NFN8 814 aa18.1■□□□□ 0.49
ARHGEF28-203ENST00000426542 DNAJB14Q8TBM8 379 aa18.1■□□□□ 0.49
ARHGEF28-203ENST00000426542 TINF2Q9BSI4 451 aa18.1■□□□□ 0.49
ARHGEF28-203ENST00000426542 TEX28O15482 410 aa18.1■□□□□ 0.49
ARHGEF28-203ENST00000426542 OR10H2O60403 315 aa18.1■□□□□ 0.49
ARHGEF28-203ENST00000426542 TFEBP19484 476 aa18.1■□□□□ 0.49
ARHGEF28-203ENST00000426542 RPL22P35268 128 aaKnown RBP18.1■□□□□ 0.49
ARHGEF28-203ENST00000426542 GALNT3Q14435 633 aa18.1■□□□□ 0.49
ARHGEF28-203ENST00000426542 ATP13A4Q4VNC1 1196 aa18.1■□□□□ 0.49
ARHGEF28-203ENST00000426542 TTMPQ5BVD1 217 aa18.1■□□□□ 0.49
ARHGEF28-203ENST00000426542 OFCC1Q8IZS5 231 aa18.1■□□□□ 0.49
ARHGEF28-203ENST00000426542 ZFP28Q8NHY6 868 aa18.1■□□□□ 0.49
ARHGEF28-203ENST00000426542 LNX1Q8TBB1 728 aaPredicted RBP18.1■□□□□ 0.49
ARHGEF28-203ENST00000426542 KCTD4Q8WVF5 259 aa18.1■□□□□ 0.49
ARHGEF28-203ENST00000426542 NELL1Q92832 810 aa18.1■□□□□ 0.49
ARHGEF28-203ENST00000426542 ZNF184Q99676 751 aaPredicted RBP18.1■□□□□ 0.49
ARHGEF28-203ENST00000426542 EHD3Q9NZN3 535 aa18.1■□□□□ 0.49
ARHGEF28-203ENST00000426542 RPS6KA6Q9UK32 745 aa18.1■□□□□ 0.49
ARHGEF28-203ENST00000426542 C15orf41Q9Y2V0 281 aa18.1■□□□□ 0.49
ARHGEF28-203ENST00000426542 SLIT1O75093 1534 aa18.1■□□□□ 0.49
ARHGEF28-203ENST00000426542 SLC28A1O00337 649 aa18.1■□□□□ 0.49
ARHGEF28-203ENST00000426542 KPNA5O15131 536 aa18.1■□□□□ 0.49
ARHGEF28-203ENST00000426542 MFN2O95140 757 aa18.1■□□□□ 0.49
ARHGEF28-203ENST00000426542 ATP5F1P24539 256 aaPredicted RBP18.1■□□□□ 0.49
ARHGEF28-203ENST00000426542 RALGDSQ12967 914 aa18.1■□□□□ 0.49
ARHGEF28-203ENST00000426542 ABRQ12979 859 aa18.1■□□□□ 0.49
ARHGEF28-203ENST00000426542 XKR6Q5GH73 641 aa18.1■□□□□ 0.49
ARHGEF28-203ENST00000426542 MZT2AQ6P582 158 aa18.1■□□□□ 0.49
ARHGEF28-203ENST00000426542 TSHZ1Q6ZSZ6 1077 aa18.1■□□□□ 0.49
ARHGEF28-203ENST00000426542 DSELQ8IZU8 1212 aa18.1■□□□□ 0.49
ARHGEF28-203ENST00000426542 PIWIL2Q8TC59 973 aaKnown RBP18.1■□□□□ 0.49
ARHGEF28-203ENST00000426542 RNF157Q96PX1 679 aa18.1■□□□□ 0.49
ARHGEF28-203ENST00000426542 PURBQ96QR8 312 aaKnown RBP18.1■□□□□ 0.49
ARHGEF28-203ENST00000426542 ACO2Q99798 780 aaKnown RBP18.1■□□□□ 0.49
ARHGEF28-203ENST00000426542 PSMD10O75832 226 aa18.09■□□□□ 0.49
ARHGEF28-203ENST00000426542 CCNA2P20248 432 aa18.09■□□□□ 0.49
ARHGEF28-203ENST00000426542 HNF4AP41235 474 aa18.09■□□□□ 0.49
ARHGEF28-203ENST00000426542 RPL38P63173 70 aaKnown RBP18.09■□□□□ 0.49
ARHGEF28-203ENST00000426542 TOP3AQ13472 1001 aaPredicted RBP18.09■□□□□ 0.49
ARHGEF28-203ENST00000426542 ZIK1Q3SY52 487 aaPredicted RBP18.09■□□□□ 0.49
ARHGEF28-203ENST00000426542 R3HCC1LQ7Z5L2 792 aaKnown RBP18.09■□□□□ 0.49
ARHGEF28-203ENST00000426542 CKAP2Q8WWK9 683 aa18.09■□□□□ 0.49
ARHGEF28-203ENST00000426542 NUAK2Q9H093 628 aa18.09■□□□□ 0.49
ARHGEF28-203ENST00000426542 ANGPT4Q9Y264 503 aa18.09■□□□□ 0.49
ARHGEF28-203ENST00000426542 ASTN1O14525 1302 aa18.09■□□□□ 0.49
ARHGEF28-203ENST00000426542 COX4I1P13073 169 aa18.09■□□□□ 0.49
ARHGEF28-203ENST00000426542 LYPLAL1Q5VWZ2 237 aa18.09■□□□□ 0.49
ARHGEF28-203ENST00000426542 CLN6Q9NWW5 311 aa18.09■□□□□ 0.49
ARHGEF28-203ENST00000426542 ATXN2Q99700 1313 aaKnown RBP18.09■□□□□ 0.49
ARHGEF28-203ENST00000426542 CNSTQ6PJW8 725 aa18.09■□□□□ 0.49
ARHGEF28-203ENST00000426542 SCIMPQ6UWF3 145 aa18.09■□□□□ 0.49
ARHGEF28-203ENST00000426542 TTC7BQ86TV6 843 aa18.09■□□□□ 0.49
ARHGEF28-203ENST00000426542 SIX5Q8N196 739 aa18.09■□□□□ 0.49
ARHGEF28-203ENST00000426542 VPS35Q96QK1 796 aa18.09■□□□□ 0.49
ARHGEF28-203ENST00000426542 C1QTNF3-AMACRE9PGA6 284 aa18.09■□□□□ 0.49
ARHGEF28-203ENST00000426542 MAGEC1O60732 1142 aa18.09■□□□□ 0.49
ARHGEF28-203ENST00000426542 GOT1P17174 413 aa18.09■□□□□ 0.49
ARHGEF28-203ENST00000426542 NOMO2Q5JPE7 1267 aa18.09■□□□□ 0.49
ARHGEF28-203ENST00000426542 SPATA6LQ8N4H0 392 aa18.09■□□□□ 0.49
ARHGEF28-203ENST00000426542 COQ7Q99807 217 aa18.09■□□□□ 0.49
ARHGEF28-203ENST00000426542 SEMA3CQ99985 751 aa18.09■□□□□ 0.49
ARHGEF28-203ENST00000426542 EXO5Q9H790 373 aa18.09■□□□□ 0.49
ARHGEF28-203ENST00000426542 POLR1BQ9H9Y6 1135 aa18.09■□□□□ 0.49
ARHGEF28-203ENST00000426542 KCNMB3Q9NPA1 279 aa18.09■□□□□ 0.49
ARHGEF28-203ENST00000426542 MCM8Q9UJA3 840 aa18.09■□□□□ 0.49
ARHGEF28-203ENST00000426542 LEF1Q9UJU2 399 aaPredicted RBP18.09■□□□□ 0.49
ARHGEF28-203ENST00000426542 PCDHGC5Q9Y5F6 944 aa18.09■□□□□ 0.49
ARHGEF28-203ENST00000426542 CABYRO75952 493 aa18.09■□□□□ 0.49
ARHGEF28-203ENST00000426542 CTPS1P17812 591 aa18.09■□□□□ 0.49
ARHGEF28-203ENST00000426542 SRP54P61011 504 aaKnown RBP18.09■□□□□ 0.49
ARHGEF28-203ENST00000426542 RAB10P61026 200 aa18.09■□□□□ 0.49
ARHGEF28-203ENST00000426542 GTF2BQ00403 316 aa18.09■□□□□ 0.49
ARHGEF28-203ENST00000426542 CES5AQ6NT32 575 aa18.09■□□□□ 0.49
ARHGEF28-203ENST00000426542 SAPCD2Q86UD0 394 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms