RNA–Protein interactions for RNA: ENST00000426539.1

GACAT3-201, gastric cancer associated transcript 3, humanhuman

TSL 3 BASIC

Gene GACAT3, Length 1,096 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-201ENST00000426539 KRIT1O00522 736 aa10.2□□□□□ -0.78
GACAT3-201ENST00000426539 AREL1O15033 823 aa10.2□□□□□ -0.78
GACAT3-201ENST00000426539 TSPAN6O43657 245 aa10.2□□□□□ -0.78
GACAT3-201ENST00000426539 KDELR3O43731 214 aa10.2□□□□□ -0.78
GACAT3-201ENST00000426539 GSRP00390 522 aa10.2□□□□□ -0.78
GACAT3-201ENST00000426539 UGT2B4P06133 528 aa10.2□□□□□ -0.78
GACAT3-201ENST00000426539 PLEKP08567 350 aaPredicted RBP10.2□□□□□ -0.78
GACAT3-201ENST00000426539 ITIH2P19823 946 aa10.2□□□□□ -0.78
GACAT3-201ENST00000426539 ETFBP38117 255 aa10.2□□□□□ -0.78
GACAT3-201ENST00000426539 GSCP56915 257 aaPredicted RBP10.2□□□□□ -0.78
GACAT3-201ENST00000426539 MYLK3Q32MK0 819 aa10.2□□□□□ -0.78
GACAT3-201ENST00000426539 TBC1D25Q3MII6 688 aa10.2□□□□□ -0.78
GACAT3-201ENST00000426539 ARL13BQ3SXY8 428 aa10.2□□□□□ -0.78
GACAT3-201ENST00000426539 ZNF805Q5CZA5 627 aa10.2□□□□□ -0.78
GACAT3-201ENST00000426539 PARGQ86W56 976 aa10.2□□□□□ -0.78
GACAT3-201ENST00000426539 RYBPQ8N488 228 aaPredicted RBP10.2□□□□□ -0.78
GACAT3-201ENST00000426539 OR2AP1Q8NGE2 309 aa10.2□□□□□ -0.78
GACAT3-201ENST00000426539 FAM172AQ8WUF8 416 aa10.2□□□□□ -0.78
GACAT3-201ENST00000426539 ASB12Q8WXK4 309 aa10.2□□□□□ -0.78
GACAT3-201ENST00000426539 BAP1Q92560 729 aa10.2□□□□□ -0.78
GACAT3-201ENST00000426539 FGF11Q92914 225 aa10.2□□□□□ -0.78
GACAT3-201ENST00000426539 NTAN1Q96AB6 310 aa10.2□□□□□ -0.78
GACAT3-201ENST00000426539 CENPTQ96BT3 561 aa10.2□□□□□ -0.78
GACAT3-201ENST00000426539 TBC1D31Q96DN5 1066 aa10.2□□□□□ -0.78
GACAT3-201ENST00000426539 MAGEH1Q9H213 219 aa10.2□□□□□ -0.78
GACAT3-201ENST00000426539 TCEAL2Q9H3H9 227 aaPredicted RBP10.2□□□□□ -0.78
GACAT3-201ENST00000426539 RETREG1Q9H6L5 497 aa10.2□□□□□ -0.78
GACAT3-201ENST00000426539 LMBRD1Q9NUN5 540 aa10.2□□□□□ -0.78
GACAT3-201ENST00000426539 FANCLQ9NW38 375 aa10.2□□□□□ -0.78
GACAT3-201ENST00000426539 DOCK4Q8N1I0 1966 aa10.19□□□□□ -0.78
GACAT3-201ENST00000426539 A0A1W2PNU3 283 aaPredicted RBP10.19□□□□□ -0.78
GACAT3-201ENST00000426539 FPGTO14772 594 aa10.19□□□□□ -0.78
GACAT3-201ENST00000426539 CASC3O15234 703 aaKnown RBP10.19□□□□□ -0.78
GACAT3-201ENST00000426539 LZTS3O60299 673 aaPredicted RBP10.19□□□□□ -0.78
GACAT3-201ENST00000426539 RAMP2O60895 175 aa10.19□□□□□ -0.78
GACAT3-201ENST00000426539 TMCC1O94876 653 aa10.19□□□□□ -0.78
GACAT3-201ENST00000426539 POP4O95707 220 aaKnown RBP10.19□□□□□ -0.78
GACAT3-201ENST00000426539 PRB1P04280 392 aa10.19□□□□□ -0.78
GACAT3-201ENST00000426539 MPOP05164 745 aa10.19□□□□□ -0.78
GACAT3-201ENST00000426539 GP1BAP07359 652 aa10.19□□□□□ -0.78
GACAT3-201ENST00000426539 ALPPL2P10696 532 aa10.19□□□□□ -0.78
GACAT3-201ENST00000426539 KRT3P12035 628 aa10.19□□□□□ -0.78
GACAT3-201ENST00000426539 IGFALSP35858 605 aa10.19□□□□□ -0.78
GACAT3-201ENST00000426539 STAT1P42224 750 aa10.19□□□□□ -0.78
GACAT3-201ENST00000426539 RABIFP47224 123 aa10.19□□□□□ -0.78
GACAT3-201ENST00000426539 HNRNPKP61978 463 aaKnown RBP eCLIP10.19□□□□□ -0.78
GACAT3-201ENST00000426539 SNRPD1P62314 119 aaKnown RBP10.19□□□□□ -0.78
GACAT3-201ENST00000426539 SGCGQ13326 291 aa10.19□□□□□ -0.78
GACAT3-201ENST00000426539 PDE1CQ14123 709 aaPredicted RBP10.19□□□□□ -0.78
GACAT3-201ENST00000426539 CLEC16AQ2KHT3 1053 aa10.19□□□□□ -0.78
GACAT3-201ENST00000426539 HS1BP3Q53T59 392 aa10.19□□□□□ -0.78
GACAT3-201ENST00000426539 LRRC73Q5JTD7 316 aa10.19□□□□□ -0.78
GACAT3-201ENST00000426539 WDR59Q6PJI9 974 aa10.19□□□□□ -0.78
GACAT3-201ENST00000426539 TRIM72Q6ZMU5 477 aa10.19□□□□□ -0.78
GACAT3-201ENST00000426539 CLEC17AQ6ZS10 378 aa10.19□□□□□ -0.78
GACAT3-201ENST00000426539 RBM43Q6ZSC3 357 aaKnown RBP10.19□□□□□ -0.78
GACAT3-201ENST00000426539 MON1BQ7L1V2 547 aa10.19□□□□□ -0.78
GACAT3-201ENST00000426539 ZSCAN30Q86W11 494 aa10.19□□□□□ -0.78
GACAT3-201ENST00000426539 PHF13Q86YI8 300 aaPredicted RBP10.19□□□□□ -0.78
GACAT3-201ENST00000426539 RBFAQ8N0V3 343 aa10.19□□□□□ -0.78
GACAT3-201ENST00000426539 RTL3Q8N8U3 475 aaKnown RBP10.19□□□□□ -0.78
GACAT3-201ENST00000426539 RAB7BQ96AH8 199 aa10.19□□□□□ -0.78
GACAT3-201ENST00000426539 KLHL32Q96NJ5 620 aa10.19□□□□□ -0.78
GACAT3-201ENST00000426539 ADAM22Q9P0K1 906 aa10.19□□□□□ -0.78
GACAT3-201ENST00000426539 CSNK1G3Q9Y6M4 447 aa10.19□□□□□ -0.78
GACAT3-201ENST00000426539 MYLKQ15746 1914 aa10.19□□□□□ -0.78
GACAT3-201ENST00000426539 IGSF10Q6WRI0 2623 aa10.19□□□□□ -0.78
GACAT3-201ENST00000426539 NEMP2A6NFY4 417 aa10.18□□□□□ -0.78
GACAT3-201ENST00000426539 SIGLEC16A6NMB1 481 aa10.18□□□□□ -0.78
GACAT3-201ENST00000426539 INSIG1O15503 277 aa10.18□□□□□ -0.78
GACAT3-201ENST00000426539 RRP8O43159 456 aaKnown RBP10.18□□□□□ -0.78
GACAT3-201ENST00000426539 CCP110O43303 1012 aa10.18□□□□□ -0.78
GACAT3-201ENST00000426539 AQP9O43315 295 aa10.18□□□□□ -0.78
GACAT3-201ENST00000426539 BUB1O43683 1085 aa10.18□□□□□ -0.78
GACAT3-201ENST00000426539 MMP20O60882 483 aa10.18□□□□□ -0.78
GACAT3-201ENST00000426539 CSO75390 466 aaKnown RBP10.18□□□□□ -0.78
GACAT3-201ENST00000426539 GCATO75600 419 aa10.18□□□□□ -0.78
GACAT3-201ENST00000426539 C1QL1O75973 258 aa10.18□□□□□ -0.78
GACAT3-201ENST00000426539 TIMP2P16035 220 aa10.18□□□□□ -0.78
GACAT3-201ENST00000426539 JUNDP17535 347 aa10.18□□□□□ -0.78
GACAT3-201ENST00000426539 GPD1P21695 349 aa10.18□□□□□ -0.78
GACAT3-201ENST00000426539 TGM2P21980 687 aa10.18□□□□□ -0.78
GACAT3-201ENST00000426539 ACTN2P35609 894 aa10.18□□□□□ -0.78
GACAT3-201ENST00000426539 COPB1P53618 953 aaKnown RBP10.18□□□□□ -0.78
GACAT3-201ENST00000426539 GEMIN4P57678 1058 aaKnown RBP10.18□□□□□ -0.78
GACAT3-201ENST00000426539 TLE3Q04726 772 aa10.18□□□□□ -0.78
GACAT3-201ENST00000426539 CCDC173Q0VFZ6 552 aa10.18□□□□□ -0.78
GACAT3-201ENST00000426539 POLD3Q15054 466 aaPredicted RBP10.18□□□□□ -0.78
GACAT3-201ENST00000426539 SYCP1Q15431 976 aa10.18□□□□□ -0.78
GACAT3-201ENST00000426539 CDKN3Q16667 212 aa10.18□□□□□ -0.78
GACAT3-201ENST00000426539 DEFB133Q30KQ1 61 aa10.18□□□□□ -0.78
GACAT3-201ENST00000426539 ZCCHC8Q6NZY4 707 aaKnown RBP10.18□□□□□ -0.78
GACAT3-201ENST00000426539 GUSBP11Q6P575 273 aa10.18□□□□□ -0.78
GACAT3-201ENST00000426539 GDPD4Q6W3E5 623 aa10.18□□□□□ -0.78
GACAT3-201ENST00000426539 LRRC69Q6ZNQ3 347 aa10.18□□□□□ -0.78
GACAT3-201ENST00000426539 APTXQ7Z2E3 356 aaKnown RBP10.18□□□□□ -0.78
GACAT3-201ENST00000426539 SLFN11Q7Z7L1 901 aa10.18□□□□□ -0.78
GACAT3-201ENST00000426539 SPACA3Q8IXA5 215 aa10.18□□□□□ -0.78
GACAT3-201ENST00000426539 C3orf20Q8ND61 904 aa10.18□□□□□ -0.78
GACAT3-201ENST00000426539 DENND6BQ8NEG7 585 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms