RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 PPCSQ9HAB8 311 aa15.29■□□□□ 0.04
GINS3-203ENST00000426538 ARNT2Q9HBZ2 717 aa15.29■□□□□ 0.04
GINS3-203ENST00000426538 LOC285095A0A1B0GVY8 99 aa15.29■□□□□ 0.04
GINS3-203ENST00000426538 K7ERQ8 282 aa15.29■□□□□ 0.04
GINS3-203ENST00000426538 HOXC11O43248 304 aaPredicted RBP15.29■□□□□ 0.04
GINS3-203ENST00000426538 GJB3O75712 270 aa15.29■□□□□ 0.04
GINS3-203ENST00000426538 EPOP01588 193 aa15.29■□□□□ 0.04
GINS3-203ENST00000426538 ARSAP15289 507 aa15.29■□□□□ 0.04
GINS3-203ENST00000426538 PSMC3P17980 439 aa15.29■□□□□ 0.04
GINS3-203ENST00000426538 CR2P20023 1033 aa15.29■□□□□ 0.04
GINS3-203ENST00000426538 RGRP47804 291 aa15.29■□□□□ 0.04
GINS3-203ENST00000426538 DGKGP49619 791 aa15.29■□□□□ 0.04
GINS3-203ENST00000426538 SLC1A5Q15758 541 aa15.29■□□□□ 0.04
GINS3-203ENST00000426538 FUT11Q495W5 492 aa15.29■□□□□ 0.04
GINS3-203ENST00000426538 RALGPS1Q5JS13 557 aa15.29■□□□□ 0.04
GINS3-203ENST00000426538 PCID2Q5JVF3 399 aa15.29■□□□□ 0.04
GINS3-203ENST00000426538 KCTD16Q68DU8 428 aa15.29■□□□□ 0.04
GINS3-203ENST00000426538 DENND5AQ6IQ26 1287 aa15.29■□□□□ 0.04
GINS3-203ENST00000426538 RNF135Q8IUD6 432 aa15.29■□□□□ 0.04
GINS3-203ENST00000426538 ELSPBP1Q96BH3 223 aa15.29■□□□□ 0.04
GINS3-203ENST00000426538 ASIC4Q96FT7 647 aa15.29■□□□□ 0.04
GINS3-203ENST00000426538 ATP6V1G3Q96LB4 118 aa15.29■□□□□ 0.04
GINS3-203ENST00000426538 FAM83CQ9BQN1 747 aa15.29■□□□□ 0.04
GINS3-203ENST00000426538 STMN4Q9H169 189 aaPredicted RBP15.29■□□□□ 0.04
GINS3-203ENST00000426538 POMKQ9H5K3 350 aa15.29■□□□□ 0.04
GINS3-203ENST00000426538 ACSS3Q9H6R3 686 aa15.29■□□□□ 0.04
GINS3-203ENST00000426538 ECT2Q9H8V3 914 aa15.29■□□□□ 0.04
GINS3-203ENST00000426538 FBXO10Q9UK96 956 aa15.29■□□□□ 0.04
GINS3-203ENST00000426538 ARIH1Q9Y4X5 557 aaPredicted RBP15.29■□□□□ 0.04
GINS3-203ENST00000426538 IKBKGQ9Y6K9 419 aa15.29■□□□□ 0.04
GINS3-203ENST00000426538 RPS6KL1Q9Y6S9 549 aa15.29■□□□□ 0.04
GINS3-203ENST00000426538 HMGB1P1B2RPK0 211 aaPredicted RBP15.28■□□□□ 0.04
GINS3-203ENST00000426538 CDH16O75309 829 aa15.28■□□□□ 0.04
GINS3-203ENST00000426538 ECT2LQ008S8 904 aa15.28■□□□□ 0.04
GINS3-203ENST00000426538 FCHO2Q0JRZ9 810 aa15.28■□□□□ 0.04
GINS3-203ENST00000426538 ACCSLQ4AC99 568 aa15.28■□□□□ 0.04
GINS3-203ENST00000426538 PPHLN1Q8NEY8 458 aaKnown RBP15.28■□□□□ 0.04
GINS3-203ENST00000426538 PGM2Q96G03 612 aa15.28■□□□□ 0.04
GINS3-203ENST00000426538 FEM1CQ96JP0 617 aa15.28■□□□□ 0.04
GINS3-203ENST00000426538 PPANQ9NQ55 473 aaKnown RBP15.28■□□□□ 0.04
GINS3-203ENST00000426538 LHX3Q9UBR4 397 aa15.28■□□□□ 0.04
GINS3-203ENST00000426538 FETUBQ9UGM5 382 aa15.28■□□□□ 0.04
GINS3-203ENST00000426538 SLC24A2Q9UI40 661 aa15.28■□□□□ 0.04
GINS3-203ENST00000426538 REV3LO60673 3130 aa15.28■□□□□ 0.04
GINS3-203ENST00000426538 SZT2Q5T011 3432 aa15.27■□□□□ 0.04
GINS3-203ENST00000426538 FAM237BA0A1B0GVD1 139 aa15.27■□□□□ 0.04
GINS3-203ENST00000426538 SMAD6O43541 496 aaKnown RBP15.27■□□□□ 0.04
GINS3-203ENST00000426538 USP1O94782 785 aa15.27■□□□□ 0.04
GINS3-203ENST00000426538 HLA-DPA1P20036 260 aa15.27■□□□□ 0.04
GINS3-203ENST00000426538 CA4P22748 312 aa15.27■□□□□ 0.04
GINS3-203ENST00000426538 ATP5DP30049 168 aa15.27■□□□□ 0.04
GINS3-203ENST00000426538 NNMTP40261 264 aa15.27■□□□□ 0.04
GINS3-203ENST00000426538 CTSOP43234 321 aaPredicted RBP15.27■□□□□ 0.04
GINS3-203ENST00000426538 MSH2P43246 934 aa15.27■□□□□ 0.04
GINS3-203ENST00000426538 CHRNA4P43681 627 aa15.27■□□□□ 0.04
GINS3-203ENST00000426538 IHHQ14623 411 aa15.27■□□□□ 0.04
GINS3-203ENST00000426538 POU6F1Q14863 301 aa15.27■□□□□ 0.04
GINS3-203ENST00000426538 KBTBD12Q3ZCT8 623 aa15.27■□□□□ 0.04
GINS3-203ENST00000426538 TTMPQ5BVD1 217 aa15.27■□□□□ 0.04
GINS3-203ENST00000426538 SPANXN3Q5MJ09 141 aa15.27■□□□□ 0.04
GINS3-203ENST00000426538 AGBL2Q5U5Z8 902 aa15.27■□□□□ 0.04
GINS3-203ENST00000426538 MBLAC2Q68D91 279 aa15.27■□□□□ 0.04
GINS3-203ENST00000426538 CYS1Q717R9 158 aa15.27■□□□□ 0.04
GINS3-203ENST00000426538 SRLQ86TD4 932 aa15.27■□□□□ 0.04
GINS3-203ENST00000426538 RIBC1Q8N443 379 aaPredicted RBP15.27■□□□□ 0.04
GINS3-203ENST00000426538 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.27■□□□□ 0.04
GINS3-203ENST00000426538 SMRP1Q8NCR6 262 aa15.27■□□□□ 0.04
GINS3-203ENST00000426538 PTCD2Q8WV60 388 aaKnown RBP15.27■□□□□ 0.04
GINS3-203ENST00000426538 MRRFQ96E11 262 aaKnown RBP15.27■□□□□ 0.04
GINS3-203ENST00000426538 TRIM56Q9BRZ2 755 aaKnown RBP15.27■□□□□ 0.04
GINS3-203ENST00000426538 TM6SF2Q9BZW4 377 aa15.27■□□□□ 0.04
GINS3-203ENST00000426538 CHRAC1Q9NRG0 131 aa15.27■□□□□ 0.04
GINS3-203ENST00000426538 SOX13Q9UN79 622 aa15.27■□□□□ 0.04
GINS3-203ENST00000426538 HS3ST2Q9Y278 367 aa15.27■□□□□ 0.04
GINS3-203ENST00000426538 TRIM24O15164 1050 aa15.26■□□□□ 0.03
GINS3-203ENST00000426538 IGSF6O95976 241 aa15.26■□□□□ 0.03
GINS3-203ENST00000426538 FGF1P05230 155 aa15.26■□□□□ 0.03
GINS3-203ENST00000426538 SRCP12931 536 aa15.26■□□□□ 0.03
GINS3-203ENST00000426538 MAPK8P45983 427 aa15.26■□□□□ 0.03
GINS3-203ENST00000426538 SNRPD1P62314 119 aaKnown RBP15.26■□□□□ 0.03
GINS3-203ENST00000426538 CRYMQ14894 314 aa15.26■□□□□ 0.03
GINS3-203ENST00000426538 COL19A1Q14993 1142 aa15.26■□□□□ 0.03
GINS3-203ENST00000426538 SIRPB2Q5JXA9 342 aa15.26■□□□□ 0.03
GINS3-203ENST00000426538 STEAP4Q687X5 459 aa15.26■□□□□ 0.03
GINS3-203ENST00000426538 NCEH1Q6PIU2 408 aa15.26■□□□□ 0.03
GINS3-203ENST00000426538 PARM1Q6UWI2 310 aa15.26■□□□□ 0.03
GINS3-203ENST00000426538 MTSS1LQ765P7 747 aa15.26■□□□□ 0.03
GINS3-203ENST00000426538 KIAA0907Q7Z7F0 614 aaPredicted RBP15.26■□□□□ 0.03
GINS3-203ENST00000426538 TMEM135Q86UB9 458 aa15.26■□□□□ 0.03
GINS3-203ENST00000426538 ADIPOR2Q86V24 386 aa15.26■□□□□ 0.03
GINS3-203ENST00000426538 TDRPQ86YL5 185 aa15.26■□□□□ 0.03
GINS3-203ENST00000426538 CTAGE3PQ8IX95 158 aa15.26■□□□□ 0.03
GINS3-203ENST00000426538 CPA6Q8N4T0 437 aa15.26■□□□□ 0.03
GINS3-203ENST00000426538 SH2D3CQ8N5H7 860 aa15.26■□□□□ 0.03
GINS3-203ENST00000426538 CDKL2Q92772 493 aa15.26■□□□□ 0.03
GINS3-203ENST00000426538 TTC17Q96AE7 1141 aa15.26■□□□□ 0.03
GINS3-203ENST00000426538 ISG20Q96AZ6 181 aaKnown RBP15.26■□□□□ 0.03
GINS3-203ENST00000426538 ZNF669Q96BR6 464 aaPredicted RBP15.26■□□□□ 0.03
GINS3-203ENST00000426538 KXD1Q9BQD3 176 aa15.26■□□□□ 0.03
GINS3-203ENST00000426538 PLA2G2FQ9BZM2 168 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms