RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 SLC18A1P54219 525 aa13.53□□□□□ -0.24
USP42-203ENST00000426246 MGAT3Q09327 533 aa13.53□□□□□ -0.24
USP42-203ENST00000426246 MAP7Q14244 749 aa13.53□□□□□ -0.24
USP42-203ENST00000426246 SLC5A9Q2M3M2 681 aa13.53□□□□□ -0.24
USP42-203ENST00000426246 LIN52Q52LA3 116 aa13.53□□□□□ -0.24
USP42-203ENST00000426246 LRRC23Q53EV4 343 aaPredicted RBP13.53□□□□□ -0.24
USP42-203ENST00000426246 ZNF789Q5FWF6 425 aa13.53□□□□□ -0.24
USP42-203ENST00000426246 BTBD8Q5XKL5 378 aa13.53□□□□□ -0.24
USP42-203ENST00000426246 OR52E8Q6IFG1 317 aa13.53□□□□□ -0.24
USP42-203ENST00000426246 LRRC8BQ6P9F7 803 aa13.53□□□□□ -0.24
USP42-203ENST00000426246 CNSTQ6PJW8 725 aa13.53□□□□□ -0.24
USP42-203ENST00000426246 FBXW8Q8N3Y1 598 aa13.53□□□□□ -0.24
USP42-203ENST00000426246 SMG8Q8ND04 991 aaKnown RBP13.53□□□□□ -0.24
USP42-203ENST00000426246 CYGBQ8WWM9 190 aa13.53□□□□□ -0.24
USP42-203ENST00000426246 DCUN1D1Q96GG9 259 aa13.53□□□□□ -0.24
USP42-203ENST00000426246 ZNF560Q96MR9 790 aa13.53□□□□□ -0.24
USP42-203ENST00000426246 SSU72Q9NP77 194 aaKnown RBP13.53□□□□□ -0.24
USP42-203ENST00000426246 PCDH10Q9P2E7 1040 aa13.53□□□□□ -0.24
USP42-203ENST00000426246 AP4B1Q9Y6B7 739 aa13.53□□□□□ -0.24
USP42-203ENST00000426246 SPATA31D3P0C874 917 aa13.53□□□□□ -0.24
USP42-203ENST00000426246 PRKAR2AP13861 404 aaKnown RBP13.53□□□□□ -0.24
USP42-203ENST00000426246 PTPN7P35236 360 aa13.53□□□□□ -0.24
USP42-203ENST00000426246 MS4A2Q01362 244 aa13.53□□□□□ -0.24
USP42-203ENST00000426246 INCA1Q0VD86 236 aa13.53□□□□□ -0.24
USP42-203ENST00000426246 GRIK3Q13003 919 aa13.53□□□□□ -0.24
USP42-203ENST00000426246 SPATA31D4Q6ZUB0 917 aa13.53□□□□□ -0.24
USP42-203ENST00000426246 UTS2BQ765I0 119 aa13.53□□□□□ -0.24
USP42-203ENST00000426246 SLC26A9Q7LBE3 791 aa13.53□□□□□ -0.24
USP42-203ENST00000426246 SERINC5Q86VE9 423 aa13.53□□□□□ -0.24
USP42-203ENST00000426246 SEPHS2Q99611 448 aa13.53□□□□□ -0.24
USP42-203ENST00000426246 LZTS1Q9Y250 596 aa13.53□□□□□ -0.24
USP42-203ENST00000426246 LRRC14BA6NHZ5 514 aa13.53□□□□□ -0.24
USP42-203ENST00000426246 MAGEC1O60732 1142 aa13.53□□□□□ -0.24
USP42-203ENST00000426246 CHRNA1P02708 482 aa13.53□□□□□ -0.24
USP42-203ENST00000426246 AHSGP02765 367 aa13.53□□□□□ -0.24
USP42-203ENST00000426246 GFAPP14136 432 aa13.53□□□□□ -0.24
USP42-203ENST00000426246 TAS2R39P59534 338 aa13.53□□□□□ -0.24
USP42-203ENST00000426246 PPP1R8Q12972 351 aaKnown RBP13.53□□□□□ -0.24
USP42-203ENST00000426246 TAF2Q6P1X5 1199 aa13.53□□□□□ -0.24
USP42-203ENST00000426246 RNF111Q6ZNA4 994 aa13.53□□□□□ -0.24
USP42-203ENST00000426246 SH2D5Q6ZV89 423 aa13.53□□□□□ -0.24
USP42-203ENST00000426246 CPNE1Q99829 537 aa13.53□□□□□ -0.24
USP42-203ENST00000426246 CCT7Q99832 543 aa13.53□□□□□ -0.24
USP42-203ENST00000426246 OCEL1Q9H607 264 aa13.53□□□□□ -0.24
USP42-203ENST00000426246 NOL11Q9H8H0 719 aaKnown RBP13.53□□□□□ -0.24
USP42-203ENST00000426246 KIAA1257Q9ULG3 409 aa13.53□□□□□ -0.24
USP42-203ENST00000426246 A8MX80 341 aa13.52□□□□□ -0.24
USP42-203ENST00000426246 M0QZ92 97 aa13.52□□□□□ -0.24
USP42-203ENST00000426246 NOS2P35228 1153 aa13.52□□□□□ -0.24
USP42-203ENST00000426246 MARK2Q7KZI7 788 aaKnown RBP13.52□□□□□ -0.24
USP42-203ENST00000426246 PIM3Q86V86 326 aa13.52□□□□□ -0.24
USP42-203ENST00000426246 ZNF786Q8N393 782 aa13.52□□□□□ -0.24
USP42-203ENST00000426246 GRIN3AQ8TCU5 1115 aa13.52□□□□□ -0.24
USP42-203ENST00000426246 TMEM209Q96SK2 561 aa13.52□□□□□ -0.24
USP42-203ENST00000426246 RBBP8Q99708 897 aa13.52□□□□□ -0.24
USP42-203ENST00000426246 SENP6Q9GZR1 1112 aaPredicted RBP13.52□□□□□ -0.24
USP42-203ENST00000426246 NDFIP2Q9NV92 336 aa13.52□□□□□ -0.24
USP42-203ENST00000426246 MOCS1Q9NZB8 636 aa13.52□□□□□ -0.24
USP42-203ENST00000426246 PDP2Q9P2J9 529 aa13.52□□□□□ -0.24
USP42-203ENST00000426246 FZD10Q9ULW2 581 aa13.52□□□□□ -0.24
USP42-203ENST00000426246 IPPQ9Y573 584 aa13.52□□□□□ -0.24
USP42-203ENST00000426246 KCTD3Q9Y597 815 aa13.52□□□□□ -0.24
USP42-203ENST00000426246 SHROOM3Q8TF72 1996 aa13.52□□□□□ -0.24
USP42-203ENST00000426246 PDLIM1O00151 329 aa13.52□□□□□ -0.25
USP42-203ENST00000426246 FKBP6O75344 327 aa13.52□□□□□ -0.25
USP42-203ENST00000426246 BAIAP3O94812 1187 aa13.52□□□□□ -0.25
USP42-203ENST00000426246 SIX3O95343 332 aaPredicted RBP13.52□□□□□ -0.25
USP42-203ENST00000426246 TBX18O95935 607 aa13.52□□□□□ -0.25
USP42-203ENST00000426246 ASGR1P07306 291 aa13.52□□□□□ -0.25
USP42-203ENST00000426246 THRAP10827 490 aa13.52□□□□□ -0.25
USP42-203ENST00000426246 CHRM3P20309 590 aa13.52□□□□□ -0.25
USP42-203ENST00000426246 NR2C2P49116 596 aa13.52□□□□□ -0.25
USP42-203ENST00000426246 KCNA10Q16322 511 aa13.52□□□□□ -0.25
USP42-203ENST00000426246 CLEC20AQ6ZU45 233 aa13.52□□□□□ -0.25
USP42-203ENST00000426246 REM2Q8IYK8 340 aaPredicted RBP13.52□□□□□ -0.25
USP42-203ENST00000426246 EFHBQ8N7U6 833 aa13.52□□□□□ -0.25
USP42-203ENST00000426246 LRRC39Q96DD0 335 aa13.52□□□□□ -0.25
USP42-203ENST00000426246 TSPYL2Q9H2G4 693 aaPredicted RBP13.52□□□□□ -0.25
USP42-203ENST00000426246 SOX17Q9H6I2 414 aaPredicted RBP13.52□□□□□ -0.25
USP42-203ENST00000426246 VCX3AQ9NNX9 186 aa13.52□□□□□ -0.25
USP42-203ENST00000426246 EPS15L1Q9UBC2 864 aa13.52□□□□□ -0.25
USP42-203ENST00000426246 ZNF180Q9UJW8 692 aa13.52□□□□□ -0.25
USP42-203ENST00000426246 NR4A1P22736 598 aa13.52□□□□□ -0.25
USP42-203ENST00000426246 CCR1P32246 355 aa13.52□□□□□ -0.25
USP42-203ENST00000426246 GRIA3P42263 894 aa13.52□□□□□ -0.25
USP42-203ENST00000426246 YWHAHQ04917 246 aaPredicted RBP13.52□□□□□ -0.25
USP42-203ENST00000426246 PLA2G4EQ3MJ16 856 aa13.52□□□□□ -0.25
USP42-203ENST00000426246 OTUD3Q5T2D3 398 aaPredicted RBP13.52□□□□□ -0.25
USP42-203ENST00000426246 CHST15Q7LFX5 561 aaPredicted RBP13.52□□□□□ -0.25
USP42-203ENST00000426246 CEP97Q8IW35 865 aa13.52□□□□□ -0.25
USP42-203ENST00000426246 B4GALNT2Q8NHY0 566 aa13.52□□□□□ -0.25
USP42-203ENST00000426246 KBTBD7Q8WVZ9 684 aa13.52□□□□□ -0.25
USP42-203ENST00000426246 LRTOMTQ8WZ04 291 aa13.52□□□□□ -0.25
USP42-203ENST00000426246 COLEC11Q9BWP8 271 aa13.52□□□□□ -0.25
USP42-203ENST00000426246 SRRDQ9UH36 339 aa13.52□□□□□ -0.25
USP42-203ENST00000426246 ZNF711Q9Y462 761 aa13.52□□□□□ -0.25
USP42-203ENST00000426246 HDAC3O15379 428 aa13.51□□□□□ -0.25
USP42-203ENST00000426246 UQCRBP14927 111 aa13.51□□□□□ -0.25
USP42-203ENST00000426246 MRPS6P82932 125 aaKnown RBP13.51□□□□□ -0.25
USP42-203ENST00000426246 ECT2LQ008S8 904 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms