RNA–Protein interactions for RNA: ENST00000426059.1

FN1-208, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 2,388 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-208ENST00000426059 MGME1Q9BQP7 344 aa17.57■□□□□ 0.4
FN1-208ENST00000426059 FAM107BQ9H098 131 aa17.57■□□□□ 0.4
FN1-208ENST00000426059 SLC28A3Q9HAS3 691 aa17.57■□□□□ 0.4
FN1-208ENST00000426059 VPS45Q9NRW7 570 aa17.57■□□□□ 0.4
FN1-208ENST00000426059 C20orf96Q9NUD7 363 aaPredicted RBP17.57■□□□□ 0.4
FN1-208ENST00000426059 ZNF510Q9Y2H8 683 aa17.57■□□□□ 0.4
FN1-208ENST00000426059 ACTL7BQ9Y614 415 aa17.57■□□□□ 0.4
FN1-208ENST00000426059 C2orf16Q68DN1 1984 aa17.56■□□□□ 0.4
FN1-208ENST00000426059 ANKRD36A6QL64 1941 aa17.56■□□□□ 0.4
FN1-208ENST00000426059 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.56■□□□□ 0.4
FN1-208ENST00000426059 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.56■□□□□ 0.4
FN1-208ENST00000426059 ERICH4A6NGS2 130 aa17.56■□□□□ 0.4
FN1-208ENST00000426059 TMCC1O94876 653 aa17.56■□□□□ 0.4
FN1-208ENST00000426059 MT-ND3P03897 115 aa17.56■□□□□ 0.4
FN1-208ENST00000426059 LMAN2Q12907 356 aa17.56■□□□□ 0.4
FN1-208ENST00000426059 FYB2Q5VWT5 728 aa17.56■□□□□ 0.4
FN1-208ENST00000426059 RTL10Q7L3V2 364 aa17.56■□□□□ 0.4
FN1-208ENST00000426059 PPP1R2P1Q96PQ5 205 aa17.56■□□□□ 0.4
FN1-208ENST00000426059 KIFC1Q9BW19 673 aa17.56■□□□□ 0.4
FN1-208ENST00000426059 E2F8A0AVK6 867 aa17.55■□□□□ 0.4
FN1-208ENST00000426059 TNRC18O15417 2968 aaPredicted RBP17.55■□□□□ 0.4
FN1-208ENST00000426059 FGF19O95750 216 aa17.55■□□□□ 0.4
FN1-208ENST00000426059 PYGBP11216 843 aa17.55■□□□□ 0.4
FN1-208ENST00000426059 MGAT5Q09328 741 aa17.55■□□□□ 0.4
FN1-208ENST00000426059 PKN3Q6P5Z2 889 aa17.55■□□□□ 0.4
FN1-208ENST00000426059 CYS1Q717R9 158 aa17.55■□□□□ 0.4
FN1-208ENST00000426059 BBS5Q8N3I7 341 aa17.55■□□□□ 0.4
FN1-208ENST00000426059 CDKL2Q92772 493 aa17.55■□□□□ 0.4
FN1-208ENST00000426059 SMIM14Q96QK8 99 aa17.55■□□□□ 0.4
FN1-208ENST00000426059 PAIP2Q9BPZ3 127 aaKnown RBP17.55■□□□□ 0.4
FN1-208ENST00000426059 MSRAQ9UJ68 235 aa17.55■□□□□ 0.4
FN1-208ENST00000426059 WNT6Q9Y6F9 365 aa17.55■□□□□ 0.4
FN1-208ENST00000426059 SPTBN5Q9NRC6 3674 aaKnown RBP17.55■□□□□ 0.4
FN1-208ENST00000426059 MAGEB16A2A368 324 aa17.55■□□□□ 0.4
FN1-208ENST00000426059 NEDD8-MDP1E9PL57 170 aa17.55■□□□□ 0.4
FN1-208ENST00000426059 SERPINF2P08697 491 aa17.55■□□□□ 0.4
FN1-208ENST00000426059 ATXN1LP0C7T5 689 aaKnown RBP17.55■□□□□ 0.4
FN1-208ENST00000426059 CA4P22748 312 aa17.55■□□□□ 0.4
FN1-208ENST00000426059 DDX6P26196 483 aaKnown RBP eCLIP17.55■□□□□ 0.4
FN1-208ENST00000426059 CNGA3Q16281 694 aa17.55■□□□□ 0.4
FN1-208ENST00000426059 PACS1Q6VY07 963 aa17.55■□□□□ 0.4
FN1-208ENST00000426059 KCNMB4Q86W47 210 aa17.55■□□□□ 0.4
FN1-208ENST00000426059 IFT43Q96FT9 208 aa17.55■□□□□ 0.4
FN1-208ENST00000426059 LRRC3BQ96PB8 259 aa17.55■□□□□ 0.4
FN1-208ENST00000426059 IARS2Q9NSE4 1012 aaKnown RBP17.55■□□□□ 0.4
FN1-208ENST00000426059 CHKBQ9Y259 395 aa17.55■□□□□ 0.4
FN1-208ENST00000426059 TCAF1Q9Y4C2 921 aa17.55■□□□□ 0.4
FN1-208ENST00000426059 PCDHGC4Q9Y5F7 938 aa17.55■□□□□ 0.4
FN1-208ENST00000426059 FAM47DPA6NHR8 397 aa17.54■□□□□ 0.4
FN1-208ENST00000426059 AP3B1O00203 1094 aa17.54■□□□□ 0.4
FN1-208ENST00000426059 CCL22O00626 93 aa17.54■□□□□ 0.4
FN1-208ENST00000426059 SMAD6O43541 496 aaKnown RBP17.54■□□□□ 0.4
FN1-208ENST00000426059 SNRPAP09012 282 aaKnown RBP17.54■□□□□ 0.4
FN1-208ENST00000426059 SERPINH1P50454 418 aaKnown RBP17.54■□□□□ 0.4
FN1-208ENST00000426059 CDK18Q07002 472 aa17.54■□□□□ 0.4
FN1-208ENST00000426059 DUSP6Q16828 381 aa17.54■□□□□ 0.4
FN1-208ENST00000426059 MARK2Q7KZI7 788 aaKnown RBP17.54■□□□□ 0.4
FN1-208ENST00000426059 ZNF771Q7L3S4 317 aaPredicted RBP17.54■□□□□ 0.4
FN1-208ENST00000426059 PNPLA1Q8N8W4 532 aa17.54■□□□□ 0.4
FN1-208ENST00000426059 PPHLN1Q8NEY8 458 aaKnown RBP17.54■□□□□ 0.4
FN1-208ENST00000426059 RPL10LQ96L21 214 aaKnown RBP17.54■□□□□ 0.4
FN1-208ENST00000426059 GDF15Q99988 308 aa17.54■□□□□ 0.4
FN1-208ENST00000426059 ABCB8Q9NUT2 735 aa17.54■□□□□ 0.4
FN1-208ENST00000426059 ZNF180Q9UJW8 692 aa17.54■□□□□ 0.4
FN1-208ENST00000426059 INTS6Q9UL03 887 aaKnown RBP17.54■□□□□ 0.4
FN1-208ENST00000426059 LOC285095A0A1B0GVY8 99 aa17.54■□□□□ 0.4
FN1-208ENST00000426059 BUD23O43709 281 aaKnown RBP17.54■□□□□ 0.4
FN1-208ENST00000426059 TYROBPO43914 113 aa17.54■□□□□ 0.4
FN1-208ENST00000426059 KRT37O76014 449 aa17.54■□□□□ 0.4
FN1-208ENST00000426059 VAPBO95292 243 aa17.54■□□□□ 0.4
FN1-208ENST00000426059 BMP1P13497 986 aa17.54■□□□□ 0.4
FN1-208ENST00000426059 PFKLP17858 780 aa17.54■□□□□ 0.4
FN1-208ENST00000426059 MSLNQ13421 630 aaPredicted RBP17.54■□□□□ 0.4
FN1-208ENST00000426059 ATXN7L2Q5T6C5 722 aaPredicted RBP17.54■□□□□ 0.4
FN1-208ENST00000426059 TEDDM1Q5T9Z0 273 aa17.54■□□□□ 0.4
FN1-208ENST00000426059 OR6K2Q8NGY2 324 aa17.54■□□□□ 0.4
FN1-208ENST00000426059 BCAS4Q8TDM0 211 aa17.54■□□□□ 0.4
FN1-208ENST00000426059 DYDC1Q8WWB3 177 aa17.54■□□□□ 0.4
FN1-208ENST00000426059 TM6SF2Q9BZW4 377 aa17.54■□□□□ 0.4
FN1-208ENST00000426059 ARNT2Q9HBZ2 717 aa17.54■□□□□ 0.4
FN1-208ENST00000426059 SCUBE2Q9NQ36 999 aa17.54■□□□□ 0.4
FN1-208ENST00000426059 SENP1Q9P0U3 644 aa17.54■□□□□ 0.4
FN1-208ENST00000426059 KCTD3Q9Y597 815 aa17.54■□□□□ 0.4
FN1-208ENST00000426059 INSIG1O15503 277 aa17.53■□□□□ 0.4
FN1-208ENST00000426059 CYBBP04839 570 aa17.53■□□□□ 0.4
FN1-208ENST00000426059 PDHA1P08559 390 aa17.53■□□□□ 0.4
FN1-208ENST00000426059 CR2P20023 1033 aa17.53■□□□□ 0.4
FN1-208ENST00000426059 HLA-FP30511 346 aa17.53■□□□□ 0.4
FN1-208ENST00000426059 WDR4P57081 412 aaKnown RBP17.53■□□□□ 0.4
FN1-208ENST00000426059 PTPRCAPQ14761 206 aa17.53■□□□□ 0.4
FN1-208ENST00000426059 ZNF77Q15935 545 aa17.53■□□□□ 0.4
FN1-208ENST00000426059 ALG1LQ6GMV1 187 aa17.53■□□□□ 0.4
FN1-208ENST00000426059 ASTLQ6HA08 431 aaPredicted RBP17.53■□□□□ 0.4
FN1-208ENST00000426059 ZNF783Q6ZMS7 281 aa17.53■□□□□ 0.4
FN1-208ENST00000426059 LEMD2Q8NC56 503 aa17.53■□□□□ 0.4
FN1-208ENST00000426059 NKIRAS1Q9NYS0 192 aa17.53■□□□□ 0.4
FN1-208ENST00000426059 DPP7Q9UHL4 492 aa17.53■□□□□ 0.4
FN1-208ENST00000426059 TRIM24O15164 1050 aa17.53■□□□□ 0.4
FN1-208ENST00000426059 TOP3BO95985 862 aaKnown RBP17.53■□□□□ 0.4
FN1-208ENST00000426059 ARNTP27540 789 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms