RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 FSHRP23945 695 aa11.41□□□□□ -0.58
SEC61A1-202ENST00000424880 POLR2BP30876 1174 aaKnown RBP11.41□□□□□ -0.58
SEC61A1-202ENST00000424880 PTGER2P43116 358 aa11.41□□□□□ -0.58
SEC61A1-202ENST00000424880 HNRNPFP52597 415 aaKnown RBP11.41□□□□□ -0.58
SEC61A1-202ENST00000424880 DPYSQ14117 519 aa11.41□□□□□ -0.58
SEC61A1-202ENST00000424880 POLD3Q15054 466 aaPredicted RBP11.41□□□□□ -0.58
SEC61A1-202ENST00000424880 KIZQ2M2Z5 673 aa11.41□□□□□ -0.58
SEC61A1-202ENST00000424880 TMEM236Q5W0B7 351 aa11.41□□□□□ -0.58
SEC61A1-202ENST00000424880 OR6B2Q6IFH4 312 aa11.41□□□□□ -0.58
SEC61A1-202ENST00000424880 ZNF280DQ6N043 979 aa11.41□□□□□ -0.58
SEC61A1-202ENST00000424880 CYP2U1Q7Z449 544 aa11.41□□□□□ -0.58
SEC61A1-202ENST00000424880 DHFR2Q86XF0 187 aa11.41□□□□□ -0.58
SEC61A1-202ENST00000424880 CDKL2Q92772 493 aa11.41□□□□□ -0.58
SEC61A1-202ENST00000424880 MFSD3Q96ES6 412 aa11.41□□□□□ -0.58
SEC61A1-202ENST00000424880 SH3YL1Q96HL8 342 aaPredicted RBP11.41□□□□□ -0.58
SEC61A1-202ENST00000424880 MAGED4Q96JG8 741 aa11.41□□□□□ -0.58
SEC61A1-202ENST00000424880 RIT2Q99578 217 aa11.41□□□□□ -0.58
SEC61A1-202ENST00000424880 AGO4Q9HCK5 861 aaKnown RBP11.41□□□□□ -0.58
SEC61A1-202ENST00000424880 TNFRSF12AQ9NP84 129 aa11.41□□□□□ -0.58
SEC61A1-202ENST00000424880 ARHGAP28Q9P2N2 729 aa11.41□□□□□ -0.58
SEC61A1-202ENST00000424880 SLC30A1Q9Y6M5 507 aa11.41□□□□□ -0.58
SEC61A1-202ENST00000424880 SYNJ2BP-COX16A0A087WUM0 186 aa11.41□□□□□ -0.58
SEC61A1-202ENST00000424880 PTGES3LE9PB15 166 aa11.41□□□□□ -0.58
SEC61A1-202ENST00000424880 APOL1O14791 398 aa11.41□□□□□ -0.58
SEC61A1-202ENST00000424880 DPEP1P16444 411 aa11.41□□□□□ -0.58
SEC61A1-202ENST00000424880 YWHAQP27348 245 aa11.41□□□□□ -0.58
SEC61A1-202ENST00000424880 HSD17B4P51659 736 aa11.41□□□□□ -0.58
SEC61A1-202ENST00000424880 CYP4V2Q6ZWL3 525 aaPredicted RBP11.41□□□□□ -0.58
SEC61A1-202ENST00000424880 RNF135Q8IUD6 432 aa11.41□□□□□ -0.58
SEC61A1-202ENST00000424880 CMTR2Q8IYT2 770 aaKnown RBP11.41□□□□□ -0.58
SEC61A1-202ENST00000424880 HMGCLL1Q8TB92 370 aa11.41□□□□□ -0.58
SEC61A1-202ENST00000424880 MUS81Q96NY9 551 aa11.41□□□□□ -0.58
SEC61A1-202ENST00000424880 TAAR1Q96RJ0 339 aa11.41□□□□□ -0.58
SEC61A1-202ENST00000424880 SH3GL1Q99961 368 aa11.41□□□□□ -0.58
SEC61A1-202ENST00000424880 BEGAINQ9BUH8 593 aa11.41□□□□□ -0.58
SEC61A1-202ENST00000424880 CCDC90BQ9GZT6 254 aa11.41□□□□□ -0.58
SEC61A1-202ENST00000424880 COX16Q9P0S2 106 aa11.41□□□□□ -0.58
SEC61A1-202ENST00000424880 BRCA1P38398 1863 aaKnown RBP11.4□□□□□ -0.58
SEC61A1-202ENST00000424880 CYP3A5P20815 502 aa11.4□□□□□ -0.58
SEC61A1-202ENST00000424880 TRPC3Q13507 836 aa11.4□□□□□ -0.58
SEC61A1-202ENST00000424880 E2F2Q14209 437 aa11.4□□□□□ -0.58
SEC61A1-202ENST00000424880 WDR78Q5VTH9 848 aa11.4□□□□□ -0.58
SEC61A1-202ENST00000424880 TBPL2Q6SJ96 375 aa11.4□□□□□ -0.58
SEC61A1-202ENST00000424880 TAS2R42Q7RTR8 314 aa11.4□□□□□ -0.58
SEC61A1-202ENST00000424880 PYROXD2Q8N2H3 581 aa11.4□□□□□ -0.58
SEC61A1-202ENST00000424880 CPSF7Q8N684 471 aaKnown RBP11.4□□□□□ -0.58
SEC61A1-202ENST00000424880 APBB2Q92870 758 aa11.4□□□□□ -0.58
SEC61A1-202ENST00000424880 SDCCAG3Q96C92 435 aa11.4□□□□□ -0.58
SEC61A1-202ENST00000424880 ALOXE3Q9BYJ1 711 aa11.4□□□□□ -0.58
SEC61A1-202ENST00000424880 FAM96AQ9H5X1 160 aa11.4□□□□□ -0.58
SEC61A1-202ENST00000424880 ZNF277Q9NRM2 450 aaPredicted RBP11.4□□□□□ -0.58
SEC61A1-202ENST00000424880 TMPRSS4Q9NRS4 437 aa11.4□□□□□ -0.58
SEC61A1-202ENST00000424880 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.4□□□□□ -0.58
SEC61A1-202ENST00000424880 UBP1Q9NZI7 540 aa11.4□□□□□ -0.58
SEC61A1-202ENST00000424880 PNMA8BQ9ULN7 279 aaPredicted RBP11.4□□□□□ -0.58
SEC61A1-202ENST00000424880 H0Y858 1186 aa11.4□□□□□ -0.58
SEC61A1-202ENST00000424880 M0QYV0 167 aa11.4□□□□□ -0.58
SEC61A1-202ENST00000424880 SNAP91O60641 907 aa11.4□□□□□ -0.58
SEC61A1-202ENST00000424880 GABBR2O75899 941 aa11.4□□□□□ -0.58
SEC61A1-202ENST00000424880 PCNAP12004 261 aa11.4□□□□□ -0.58
SEC61A1-202ENST00000424880 PPP4R4Q6NUP7 873 aa11.4□□□□□ -0.58
SEC61A1-202ENST00000424880 TMEM179Q6ZVK1 233 aa11.4□□□□□ -0.58
SEC61A1-202ENST00000424880 NIPA2Q8N8Q9 360 aa11.4□□□□□ -0.58
SEC61A1-202ENST00000424880 KCTD4Q8WVF5 259 aa11.4□□□□□ -0.58
SEC61A1-202ENST00000424880 ARNTL2Q8WYA1 636 aa11.4□□□□□ -0.58
SEC61A1-202ENST00000424880 ZNF669Q96BR6 464 aaPredicted RBP11.4□□□□□ -0.58
SEC61A1-202ENST00000424880 TCF12Q99081 682 aa11.4□□□□□ -0.58
SEC61A1-202ENST00000424880 ACE2Q9BYF1 805 aaPredicted RBP11.4□□□□□ -0.58
SEC61A1-202ENST00000424880 RAD21L1Q9H4I0 556 aa11.4□□□□□ -0.58
SEC61A1-202ENST00000424880 CACNA2D2Q9NY47 1150 aa11.4□□□□□ -0.58
SEC61A1-202ENST00000424880 AASSQ9UDR5 926 aa11.4□□□□□ -0.58
SEC61A1-202ENST00000424880 USP22Q9UPT9 525 aa11.4□□□□□ -0.58
SEC61A1-202ENST00000424880 IFT52Q9Y366 437 aa11.4□□□□□ -0.58
SEC61A1-202ENST00000424880 TCAF1Q9Y4C2 921 aa11.4□□□□□ -0.58
SEC61A1-202ENST00000424880 SLC7A1P30825 629 aa11.39□□□□□ -0.59
SEC61A1-202ENST00000424880 COPZ1P61923 177 aa11.39□□□□□ -0.59
SEC61A1-202ENST00000424880 RACK1P63244 317 aaKnown RBP11.39□□□□□ -0.59
SEC61A1-202ENST00000424880 NIPAL4Q0D2K0 466 aa11.39□□□□□ -0.59
SEC61A1-202ENST00000424880 REP15Q6BDI9 236 aa11.39□□□□□ -0.59
SEC61A1-202ENST00000424880 IQSEC1Q6DN90 963 aa11.39□□□□□ -0.59
SEC61A1-202ENST00000424880 ITIH5Q86UX2 942 aa11.39□□□□□ -0.59
SEC61A1-202ENST00000424880 SHCBP1Q8NEM2 672 aa11.39□□□□□ -0.59
SEC61A1-202ENST00000424880 PSMA8Q8TAA3 256 aa11.39□□□□□ -0.59
SEC61A1-202ENST00000424880 NACC2Q96BF6 587 aa11.39□□□□□ -0.59
SEC61A1-202ENST00000424880 C1orf50Q9BV19 199 aa11.39□□□□□ -0.59
SEC61A1-202ENST00000424880 B3GNT5Q9BYG0 378 aa11.39□□□□□ -0.59
SEC61A1-202ENST00000424880 ABCB10Q9NRK6 738 aa11.39□□□□□ -0.59
SEC61A1-202ENST00000424880 SLCO3A1Q9UIG8 710 aa11.39□□□□□ -0.59
SEC61A1-202ENST00000424880 PCDHGA8Q9Y5G5 932 aa11.39□□□□□ -0.59
SEC61A1-202ENST00000424880 PSME4Q14997 1843 aa11.39□□□□□ -0.59
SEC61A1-202ENST00000424880 GREB1LQ9C091 1923 aaPredicted RBP11.39□□□□□ -0.59
SEC61A1-202ENST00000424880 A8MV72 311 aaPredicted RBP11.39□□□□□ -0.59
SEC61A1-202ENST00000424880 K7ERI5 159 aa11.39□□□□□ -0.59
SEC61A1-202ENST00000424880 KCNK1O00180 336 aa11.39□□□□□ -0.59
SEC61A1-202ENST00000424880 NRP2O60462 931 aa11.39□□□□□ -0.59
SEC61A1-202ENST00000424880 HSPA8P11142 646 aaKnown RBP11.39□□□□□ -0.59
SEC61A1-202ENST00000424880 VDRP11473 427 aa11.39□□□□□ -0.59
SEC61A1-202ENST00000424880 ENDOUP21128 410 aaKnown RBP11.39□□□□□ -0.59
SEC61A1-202ENST00000424880 TBXAS1P24557 533 aaPredicted RBP11.39□□□□□ -0.59
SEC61A1-202ENST00000424880 PLA2G16P53816 162 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms