RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 OSBPL2Q9H1P3 480 aa16.4■□□□□ 0.22
COL18A1-205ENST00000423214 VPS16Q9H269 839 aa16.4■□□□□ 0.22
COL18A1-205ENST00000423214 NLRC4Q9NPP4 1024 aa16.4■□□□□ 0.22
COL18A1-205ENST00000423214 GGT7Q9UJ14 662 aa16.4■□□□□ 0.22
COL18A1-205ENST00000423214 ZSCAN5CA6NGD5 496 aaPredicted RBP16.39■□□□□ 0.21
COL18A1-205ENST00000423214 C2CD4BA6NLJ0 364 aa16.39■□□□□ 0.21
COL18A1-205ENST00000423214 GOLGA6L22H0YM25 854 aa16.39■□□□□ 0.21
COL18A1-205ENST00000423214 RIOK3O14730 519 aaKnown RBP16.39■□□□□ 0.21
COL18A1-205ENST00000423214 USP12O75317 370 aa16.39■□□□□ 0.21
COL18A1-205ENST00000423214 LRIG2O94898 1065 aa16.39■□□□□ 0.21
COL18A1-205ENST00000423214 GJB6O95452 261 aa16.39■□□□□ 0.21
COL18A1-205ENST00000423214 CD160O95971 181 aa16.39■□□□□ 0.21
COL18A1-205ENST00000423214 IGSF6O95976 241 aa16.39■□□□□ 0.21
COL18A1-205ENST00000423214 MPOP05164 745 aa16.39■□□□□ 0.21
COL18A1-205ENST00000423214 PLEKP08567 350 aaPredicted RBP16.39■□□□□ 0.21
COL18A1-205ENST00000423214 JUNDP17535 347 aa16.39■□□□□ 0.21
COL18A1-205ENST00000423214 KLK7P49862 253 aa16.39■□□□□ 0.21
COL18A1-205ENST00000423214 RAD51Q06609 339 aa16.39■□□□□ 0.21
COL18A1-205ENST00000423214 CDKN3Q16667 212 aa16.39■□□□□ 0.21
COL18A1-205ENST00000423214 DEFB133Q30KQ1 61 aa16.39■□□□□ 0.21
COL18A1-205ENST00000423214 BROXQ5VW32 411 aa16.39■□□□□ 0.21
COL18A1-205ENST00000423214 CDCP2Q5VXM1 449 aa16.39■□□□□ 0.21
COL18A1-205ENST00000423214 LSMEM2Q8N112 164 aa16.39■□□□□ 0.21
COL18A1-205ENST00000423214 CCDC185Q8N715 623 aa16.39■□□□□ 0.21
COL18A1-205ENST00000423214 LMX1AQ8TE12 382 aa16.39■□□□□ 0.21
COL18A1-205ENST00000423214 BTN2A2Q8WVV5 523 aa16.39■□□□□ 0.21
COL18A1-205ENST00000423214 GLMNQ92990 594 aa16.39■□□□□ 0.21
COL18A1-205ENST00000423214 ZNF578Q96N58 590 aaPredicted RBP16.39■□□□□ 0.21
COL18A1-205ENST00000423214 KLHL32Q96NJ5 620 aa16.39■□□□□ 0.21
COL18A1-205ENST00000423214 IL12RB2Q99665 862 aa16.39■□□□□ 0.21
COL18A1-205ENST00000423214 C1QTNF7Q9BXJ2 289 aa16.39■□□□□ 0.21
COL18A1-205ENST00000423214 C1QTNF2Q9BXJ5 285 aa16.39■□□□□ 0.21
COL18A1-205ENST00000423214 APOBEC3BQ9UH17 382 aaKnown RBP16.39■□□□□ 0.21
COL18A1-205ENST00000423214 NEU3Q9UQ49 428 aa16.39■□□□□ 0.21
COL18A1-205ENST00000423214 DAAM1Q9Y4D1 1078 aa16.39■□□□□ 0.21
COL18A1-205ENST00000423214 CSNK1G3Q9Y6M4 447 aa16.39■□□□□ 0.21
COL18A1-205ENST00000423214 LY6G6EA0A0G2JKS1 128 aa16.38■□□□□ 0.21
COL18A1-205ENST00000423214 CPED1A4D0V7 1026 aa16.38■□□□□ 0.21
COL18A1-205ENST00000423214 ANKRD62A6NC57 917 aa16.38■□□□□ 0.21
COL18A1-205ENST00000423214 FAM72CH0Y354 149 aa16.38■□□□□ 0.21
COL18A1-205ENST00000423214 ATXN7O15265 892 aaPredicted RBP16.38■□□□□ 0.21
COL18A1-205ENST00000423214 BUB1O43683 1085 aa16.38■□□□□ 0.21
COL18A1-205ENST00000423214 TMCC1O94876 653 aa16.38■□□□□ 0.21
COL18A1-205ENST00000423214 POP4O95707 220 aaKnown RBP16.38■□□□□ 0.21
COL18A1-205ENST00000423214 KRT3P12035 628 aa16.38■□□□□ 0.21
COL18A1-205ENST00000423214 GPD1P21695 349 aa16.38■□□□□ 0.21
COL18A1-205ENST00000423214 STAT1P42224 750 aa16.38■□□□□ 0.21
COL18A1-205ENST00000423214 HDAC4P56524 1084 aa16.38■□□□□ 0.21
COL18A1-205ENST00000423214 RHOAP61586 193 aa16.38■□□□□ 0.21
COL18A1-205ENST00000423214 CXADRP78310 365 aa16.38■□□□□ 0.21
COL18A1-205ENST00000423214 PTK2BQ14289 1009 aa16.38■□□□□ 0.21
COL18A1-205ENST00000423214 KRT31Q15323 416 aa16.38■□□□□ 0.21
COL18A1-205ENST00000423214 EFHC2Q5JST6 749 aa16.38■□□□□ 0.21
COL18A1-205ENST00000423214 LRRC73Q5JTD7 316 aa16.38■□□□□ 0.21
COL18A1-205ENST00000423214 ATXN7L2Q5T6C5 722 aaPredicted RBP16.38■□□□□ 0.21
COL18A1-205ENST00000423214 FAM72AQ5TYM5 149 aa16.38■□□□□ 0.21
COL18A1-205ENST00000423214 FAM72DQ6L9T8 149 aa16.38■□□□□ 0.21
COL18A1-205ENST00000423214 GPR155Q7Z3F1 870 aa16.38■□□□□ 0.21
COL18A1-205ENST00000423214 FAM72BQ86X60 149 aa16.38■□□□□ 0.21
COL18A1-205ENST00000423214 SPACA3Q8IXA5 215 aa16.38■□□□□ 0.21
COL18A1-205ENST00000423214 CXorf40AQ8TE69 158 aa16.38■□□□□ 0.21
COL18A1-205ENST00000423214 ASB12Q8WXK4 309 aa16.38■□□□□ 0.21
COL18A1-205ENST00000423214 SLC39A7Q92504 469 aa16.38■□□□□ 0.21
COL18A1-205ENST00000423214 NTAN1Q96AB6 310 aa16.38■□□□□ 0.21
COL18A1-205ENST00000423214 NAF1Q96HR8 494 aaKnown RBP16.38■□□□□ 0.21
COL18A1-205ENST00000423214 PCMTD1Q96MG8 357 aaPredicted RBP16.38■□□□□ 0.21
COL18A1-205ENST00000423214 KLF6Q99612 283 aaPredicted RBP16.38■□□□□ 0.21
COL18A1-205ENST00000423214 NCAPGQ9BPX3 1015 aa16.38■□□□□ 0.21
COL18A1-205ENST00000423214 SEPT11Q9NVA2 429 aaKnown RBP16.38■□□□□ 0.21
COL18A1-205ENST00000423214 ADAM22Q9P0K1 906 aa16.38■□□□□ 0.21
COL18A1-205ENST00000423214 SPASTQ9UBP0 616 aa16.38■□□□□ 0.21
COL18A1-205ENST00000423214 RAI2Q9Y5P3 530 aa16.38■□□□□ 0.21
COL18A1-205ENST00000423214 U3KQA8 63 aa16.38■□□□□ 0.21
COL18A1-205ENST00000423214 TEX51A0A1B0GUA7 166 aa16.37■□□□□ 0.21
COL18A1-205ENST00000423214 TM7SF2O76062 418 aa16.37■□□□□ 0.21
COL18A1-205ENST00000423214 CALB1P05937 261 aa16.37■□□□□ 0.21
COL18A1-205ENST00000423214 DESP17661 470 aa16.37■□□□□ 0.21
COL18A1-205ENST00000423214 CHRNB2P17787 502 aa16.37■□□□□ 0.21
COL18A1-205ENST00000423214 XPAP23025 273 aaPredicted RBP16.37■□□□□ 0.21
COL18A1-205ENST00000423214 EPHB2P29323 1055 aa16.37■□□□□ 0.21
COL18A1-205ENST00000423214 IGFALSP35858 605 aa16.37■□□□□ 0.21
COL18A1-205ENST00000423214 GSCP56915 257 aaPredicted RBP16.37■□□□□ 0.21
COL18A1-205ENST00000423214 JAM2P57087 298 aa16.37■□□□□ 0.21
COL18A1-205ENST00000423214 PFN3P60673 137 aa16.37■□□□□ 0.21
COL18A1-205ENST00000423214 TLE3Q04726 772 aa16.37■□□□□ 0.21
COL18A1-205ENST00000423214 C19orf57Q0VDD7 668 aa16.37■□□□□ 0.21
COL18A1-205ENST00000423214 NR0B2Q15466 257 aa16.37■□□□□ 0.21
COL18A1-205ENST00000423214 MYLK3Q32MK0 819 aa16.37■□□□□ 0.21
COL18A1-205ENST00000423214 GUSBP11Q6P575 273 aa16.37■□□□□ 0.21
COL18A1-205ENST00000423214 GDPD4Q6W3E5 623 aa16.37■□□□□ 0.21
COL18A1-205ENST00000423214 RBM43Q6ZSC3 357 aaKnown RBP16.37■□□□□ 0.21
COL18A1-205ENST00000423214 EFL1Q7Z2Z2 1120 aaKnown RBP16.37■□□□□ 0.21
COL18A1-205ENST00000423214 SLFN11Q7Z7L1 901 aa16.37■□□□□ 0.21
COL18A1-205ENST00000423214 VPS36Q86VN1 386 aa16.37■□□□□ 0.21
COL18A1-205ENST00000423214 PHACTR4Q8IZ21 702 aa16.37■□□□□ 0.21
COL18A1-205ENST00000423214 CASKIN2Q8WXE0 1202 aa16.37■□□□□ 0.21
COL18A1-205ENST00000423214 POLR1BQ9H9Y6 1135 aa16.37■□□□□ 0.21
COL18A1-205ENST00000423214 TK2O00142 265 aa16.36■□□□□ 0.21
COL18A1-205ENST00000423214 SPINT1O43278 529 aa16.36■□□□□ 0.21
COL18A1-205ENST00000423214 KDELR3O43731 214 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms