RNA–Protein interactions for RNA: ENST00000422242.1

RAB5A-203, Transcript of RAB5A, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB5A, Length 1,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-203ENST00000422242 DDX43Q9NXZ2 648 aaKnown RBP11.25□□□□□ -0.61
RAB5A-203ENST00000422242 CALCOCO1Q9P1Z2 691 aa11.25□□□□□ -0.61
RAB5A-203ENST00000422242 FEZ2Q9UHY8 353 aaPredicted RBP11.25□□□□□ -0.61
RAB5A-203ENST00000422242 NOCTQ9UK39 431 aaKnown RBP11.25□□□□□ -0.61
RAB5A-203ENST00000422242 CDH9Q9ULB4 789 aa11.25□□□□□ -0.61
RAB5A-203ENST00000422242 NME7Q9Y5B8 376 aa11.25□□□□□ -0.61
RAB5A-203ENST00000422242 LINC01553A4QN01 128 aa11.24□□□□□ -0.61
RAB5A-203ENST00000422242 NT5C1B-RDH14C9J2C7 533 aa11.24□□□□□ -0.61
RAB5A-203ENST00000422242 I3L4J1 428 aa11.24□□□□□ -0.61
RAB5A-203ENST00000422242 LCA5LO95447 670 aa11.24□□□□□ -0.61
RAB5A-203ENST00000422242 RB1P06400 928 aa11.24□□□□□ -0.61
RAB5A-203ENST00000422242 TKTP29401 623 aaKnown RBP11.24□□□□□ -0.61
RAB5A-203ENST00000422242 PBX3P40426 434 aa11.24□□□□□ -0.61
RAB5A-203ENST00000422242 CCT5P48643 541 aa11.24□□□□□ -0.61
RAB5A-203ENST00000422242 CD97P48960 835 aa11.24□□□□□ -0.61
RAB5A-203ENST00000422242 KRT17Q04695 432 aa11.24□□□□□ -0.61
RAB5A-203ENST00000422242 MAPRE1Q15691 268 aaKnown RBP11.24□□□□□ -0.61
RAB5A-203ENST00000422242 ASTE1Q2TB18 679 aaPredicted RBP11.24□□□□□ -0.61
RAB5A-203ENST00000422242 USP41Q3LFD5 358 aa11.24□□□□□ -0.61
RAB5A-203ENST00000422242 TDRD12Q587J7 1177 aaKnown RBP11.24□□□□□ -0.61
RAB5A-203ENST00000422242 FAM171A1Q5VUB5 890 aa11.24□□□□□ -0.61
RAB5A-203ENST00000422242 ARHGAP17Q68EM7 881 aa11.24□□□□□ -0.61
RAB5A-203ENST00000422242 PPP1R2P3Q6NXS1 205 aa11.24□□□□□ -0.61
RAB5A-203ENST00000422242 TRIM72Q6ZMU5 477 aa11.24□□□□□ -0.61
RAB5A-203ENST00000422242 TDHQ8IZJ6 230 aa11.24□□□□□ -0.61
RAB5A-203ENST00000422242 PQLC1Q8N2U9 271 aa11.24□□□□□ -0.61
RAB5A-203ENST00000422242 ZNF606Q8WXB4 792 aa11.24□□□□□ -0.61
RAB5A-203ENST00000422242 CCDC42Q96M95 316 aa11.24□□□□□ -0.61
RAB5A-203ENST00000422242 UHRF1Q96T88 793 aaPredicted RBP11.24□□□□□ -0.61
RAB5A-203ENST00000422242 CHP1Q99653 195 aa11.24□□□□□ -0.61
RAB5A-203ENST00000422242 AGPAT1Q99943 283 aa11.24□□□□□ -0.61
RAB5A-203ENST00000422242 TTPALQ9BTX7 342 aa11.24□□□□□ -0.61
RAB5A-203ENST00000422242 HERC2P3Q9BVR0 1158 aa11.24□□□□□ -0.61
RAB5A-203ENST00000422242 MYLK2Q9H1R3 596 aa11.24□□□□□ -0.61
RAB5A-203ENST00000422242 LDAHQ9H6V9 325 aa11.24□□□□□ -0.61
RAB5A-203ENST00000422242 NHEJ1Q9H9Q4 299 aaPredicted RBP11.24□□□□□ -0.61
RAB5A-203ENST00000422242 SARS2Q9NP81 518 aaKnown RBP11.24□□□□□ -0.61
RAB5A-203ENST00000422242 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.24□□□□□ -0.61
RAB5A-203ENST00000422242 HMGXB4Q9UGU5 601 aa11.24□□□□□ -0.61
RAB5A-203ENST00000422242 CDC42EP3Q9UKI2 254 aa11.24□□□□□ -0.61
RAB5A-203ENST00000422242 A0A0G2JNJ9 132 aa11.23□□□□□ -0.61
RAB5A-203ENST00000422242 OR6C75A6NL08 312 aa11.23□□□□□ -0.61
RAB5A-203ENST00000422242 H7C4K7 107 aa11.23□□□□□ -0.61
RAB5A-203ENST00000422242 DDX3XO00571 662 aaKnown RBP eCLIP11.23□□□□□ -0.611e-11■■□□□ 14
RAB5A-203ENST00000422242 APOL1O14791 398 aa11.23□□□□□ -0.61
RAB5A-203ENST00000422242 AMY1AP04745 511 aa11.23□□□□□ -0.61
RAB5A-203ENST00000422242 SKILP12757 684 aa11.23□□□□□ -0.61
RAB5A-203ENST00000422242 LMO2P25791 158 aa11.23□□□□□ -0.61
RAB5A-203ENST00000422242 DEKP35659 375 aaKnown RBP11.23□□□□□ -0.61
RAB5A-203ENST00000422242 CYLC1P35663 651 aaPredicted RBP11.23□□□□□ -0.61
RAB5A-203ENST00000422242 BMPR1AP36894 532 aa11.23□□□□□ -0.61
RAB5A-203ENST00000422242 UBE3AQ05086 875 aa11.23□□□□□ -0.61
RAB5A-203ENST00000422242 SMARCB1Q12824 385 aa11.23□□□□□ -0.61
RAB5A-203ENST00000422242 RTP5Q14D33 572 aa11.23□□□□□ -0.61
RAB5A-203ENST00000422242 RAB30Q15771 203 aa11.23□□□□□ -0.61
RAB5A-203ENST00000422242 SLC18A3Q16572 532 aa11.23□□□□□ -0.61
RAB5A-203ENST00000422242 KHDC1LQ5JSQ8 128 aa11.23□□□□□ -0.61
RAB5A-203ENST00000422242 FYB2Q5VWT5 728 aa11.23□□□□□ -0.61
RAB5A-203ENST00000422242 TMEM200BQ69YZ2 307 aa11.23□□□□□ -0.61
RAB5A-203ENST00000422242 ZNF280DQ6N043 979 aa11.23□□□□□ -0.61
RAB5A-203ENST00000422242 FAM171BQ6P995 826 aa11.23□□□□□ -0.61
RAB5A-203ENST00000422242 ZNF571Q7Z3V5 609 aaPredicted RBP11.23□□□□□ -0.61
RAB5A-203ENST00000422242 SYTL1Q8IYJ3 562 aa11.23□□□□□ -0.61
RAB5A-203ENST00000422242 B3GALNT2Q8NCR0 500 aa11.23□□□□□ -0.61
RAB5A-203ENST00000422242 AGBL5Q8NDL9 886 aa11.23□□□□□ -0.61
RAB5A-203ENST00000422242 SLC30A5Q8TAD4 765 aa11.23□□□□□ -0.61
RAB5A-203ENST00000422242 NKD2Q969F2 451 aaPredicted RBP11.23□□□□□ -0.61
RAB5A-203ENST00000422242 TRIM44Q96DX7 344 aaPredicted RBP11.23□□□□□ -0.61
RAB5A-203ENST00000422242 RTP3Q9BQQ7 232 aa11.23□□□□□ -0.61
RAB5A-203ENST00000422242 SYT15Q9BQS2 421 aa11.23□□□□□ -0.61
RAB5A-203ENST00000422242 VN1R3Q9BXE9 311 aa11.23□□□□□ -0.61
RAB5A-203ENST00000422242 PRO3102Q9H379 93 aa11.23□□□□□ -0.61
RAB5A-203ENST00000422242 DEF6Q9H4E7 631 aa11.23□□□□□ -0.61
RAB5A-203ENST00000422242 Q9UFV3 132 aa11.23□□□□□ -0.61
RAB5A-203ENST00000422242 MAGED2Q9UNF1 606 aaPredicted RBP11.23□□□□□ -0.61
RAB5A-203ENST00000422242 SSX2IPQ9Y2D8 614 aa11.23□□□□□ -0.61
RAB5A-203ENST00000422242 ATP8B3O60423 1300 aa11.23□□□□□ -0.61
RAB5A-203ENST00000422242 ATG2AQ2TAZ0 1938 aa11.22□□□□□ -0.61
RAB5A-203ENST00000422242 MTCL1Q9Y4B5 1905 aaKnown RBP11.22□□□□□ -0.61
RAB5A-203ENST00000422242 A0A1W2PPC1 479 aa11.22□□□□□ -0.61
RAB5A-203ENST00000422242 EIF3CLB5ME19 914 aaKnown RBP11.22□□□□□ -0.61
RAB5A-203ENST00000422242 H0Y858 1186 aa11.22□□□□□ -0.61
RAB5A-203ENST00000422242 O00370 1275 aa11.22□□□□□ -0.61
RAB5A-203ENST00000422242 THAP12O43422 761 aa11.22□□□□□ -0.61
RAB5A-203ENST00000422242 TBC1D4O60343 1298 aa11.22□□□□□ -0.61
RAB5A-203ENST00000422242 LSM8O95777 96 aaKnown RBP11.22□□□□□ -0.61
RAB5A-203ENST00000422242 PLEKP08567 350 aaPredicted RBP11.22□□□□□ -0.61
RAB5A-203ENST00000422242 GZMAP12544 262 aa11.22□□□□□ -0.61
RAB5A-203ENST00000422242 NCAM1P13591 858 aa11.22□□□□□ -0.61
RAB5A-203ENST00000422242 TNFAIP3P21580 790 aa11.22□□□□□ -0.61
RAB5A-203ENST00000422242 CDH5P33151 784 aaPredicted RBP11.22□□□□□ -0.61
RAB5A-203ENST00000422242 GLUD2P49448 558 aa11.22□□□□□ -0.61
RAB5A-203ENST00000422242 RABGGTBP53611 331 aa11.22□□□□□ -0.61
RAB5A-203ENST00000422242 TSPY1Q01534 308 aa11.22□□□□□ -0.61
RAB5A-203ENST00000422242 CREMQ03060 361 aa11.22□□□□□ -0.61
RAB5A-203ENST00000422242 STARD3Q14849 445 aa11.22□□□□□ -0.61
RAB5A-203ENST00000422242 FLYWCH1Q4VC44 716 aa11.22□□□□□ -0.61
RAB5A-203ENST00000422242 C10orf76Q5T2E6 689 aa11.22□□□□□ -0.61
RAB5A-203ENST00000422242 LCLAT1Q6UWP7 414 aa11.22□□□□□ -0.61
RAB5A-203ENST00000422242 ACOT1Q86TX2 421 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms