RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 RAB7BQ96AH8 199 aa26.76■■□□□ 1.87
CDK9-202ENST00000421939 CINPQ9BW66 212 aaPredicted RBP26.76■■□□□ 1.87
CDK9-202ENST00000421939 FADS3Q9Y5Q0 445 aa26.76■■□□□ 1.87
CDK9-202ENST00000421939 SNX11Q9Y5W9 270 aa26.76■■□□□ 1.87
CDK9-202ENST00000421939 MED19A0JLT2 244 aaPredicted RBP26.75■■□□□ 1.87
CDK9-202ENST00000421939 UPK3BL1B0FP48 263 aa26.75■■□□□ 1.87
CDK9-202ENST00000421939 UPK3BL2E5RIL1 263 aa26.75■■□□□ 1.87
CDK9-202ENST00000421939 WNT9AO14904 365 aa26.75■■□□□ 1.87
CDK9-202ENST00000421939 LCA5LO95447 670 aa26.75■■□□□ 1.87
CDK9-202ENST00000421939 CSRP1P21291 193 aaKnown RBP26.75■■□□□ 1.87
CDK9-202ENST00000421939 CD38P28907 300 aa26.75■■□□□ 1.87
CDK9-202ENST00000421939 CYLC1P35663 651 aaPredicted RBP26.75■■□□□ 1.87
CDK9-202ENST00000421939 ABL2P42684 1182 aa26.75■■□□□ 1.87
CDK9-202ENST00000421939 MAGEA1P43355 309 aa26.75■■□□□ 1.87
CDK9-202ENST00000421939 NOVA1P51513 510 aaKnown RBP26.75■■□□□ 1.87
CDK9-202ENST00000421939 C21orf59P57076 290 aa26.75■■□□□ 1.87
CDK9-202ENST00000421939 SLC14A1Q13336 389 aa26.75■■□□□ 1.87
CDK9-202ENST00000421939 PDK2Q15119 407 aa26.75■■□□□ 1.87
CDK9-202ENST00000421939 ZNF284Q2VY69 593 aa26.75■■□□□ 1.87
CDK9-202ENST00000421939 TMCO4Q5TGY1 634 aa26.75■■□□□ 1.87
CDK9-202ENST00000421939 MAP7D3Q8IWC1 876 aa26.75■■□□□ 1.87
CDK9-202ENST00000421939 ATPAF2Q8N5M1 289 aa26.75■■□□□ 1.87
CDK9-202ENST00000421939 SKA1Q96BD8 255 aa26.75■■□□□ 1.87
CDK9-202ENST00000421939 ZNF599Q96NL3 588 aa26.75■■□□□ 1.87
CDK9-202ENST00000421939 IL21RQ9HBE5 538 aa26.75■■□□□ 1.87
CDK9-202ENST00000421939 FNDC3AQ9Y2H6 1198 aaKnown RBP26.75■■□□□ 1.87
CDK9-202ENST00000421939 A0A1W2PR77 199 aa26.74■■□□□ 1.87
CDK9-202ENST00000421939 INSIG1O15503 277 aa26.74■■□□□ 1.87
CDK9-202ENST00000421939 KCNK5O95279 499 aa26.74■■□□□ 1.87
CDK9-202ENST00000421939 WNT1P04628 370 aa26.74■■□□□ 1.87
CDK9-202ENST00000421939 PRLRP16471 622 aa26.74■■□□□ 1.87
CDK9-202ENST00000421939 FECHP22830 423 aa26.74■■□□□ 1.87
CDK9-202ENST00000421939 CTSKP43235 329 aa26.74■■□□□ 1.87
CDK9-202ENST00000421939 SPA17Q15506 151 aa26.74■■□□□ 1.87
CDK9-202ENST00000421939 SLC45A4Q5BKX6 768 aa26.74■■□□□ 1.87
CDK9-202ENST00000421939 ZFYVE27Q5T4F4 411 aa26.74■■□□□ 1.87
CDK9-202ENST00000421939 PSAPL1Q6NUJ1 521 aa26.74■■□□□ 1.87
CDK9-202ENST00000421939 TSEN2Q8NCE0 465 aaKnown RBP26.74■■□□□ 1.87
CDK9-202ENST00000421939 CPEB1Q9BZB8 566 aaKnown RBP26.74■■□□□ 1.87
CDK9-202ENST00000421939 ZFR2Q9UPR6 939 aaKnown RBP26.74■■□□□ 1.87
CDK9-202ENST00000421939 PRAMEF26H0Y7S4 382 aa26.73■■□□□ 1.87
CDK9-202ENST00000421939 PIGNO95427 931 aa26.73■■□□□ 1.87
CDK9-202ENST00000421939 ZNF883P0CG24 379 aa26.73■■□□□ 1.87
CDK9-202ENST00000421939 CD59P13987 128 aa26.73■■□□□ 1.87
CDK9-202ENST00000421939 RGRP47804 291 aa26.73■■□□□ 1.87
CDK9-202ENST00000421939 GRM3Q14832 879 aa26.73■■□□□ 1.87
CDK9-202ENST00000421939 TMEM259Q4ZIN3 620 aa26.73■■□□□ 1.87
CDK9-202ENST00000421939 SEL1L3Q68CR1 1132 aa26.73■■□□□ 1.87
CDK9-202ENST00000421939 KIAA1161Q6NSJ0 714 aa26.73■■□□□ 1.87
CDK9-202ENST00000421939 PIP4P1Q86T03 277 aa26.73■■□□□ 1.87
CDK9-202ENST00000421939 PCDH19Q8TAB3 1148 aa26.73■■□□□ 1.87
CDK9-202ENST00000421939 KLK6Q92876 244 aa26.73■■□□□ 1.87
CDK9-202ENST00000421939 FAF2Q96CS3 445 aa26.73■■□□□ 1.87
CDK9-202ENST00000421939 ANP32EQ9BTT0 268 aa26.73■■□□□ 1.87
CDK9-202ENST00000421939 LUC7LQ9NQ29 371 aaKnown RBP26.73■■□□□ 1.87
CDK9-202ENST00000421939 DKK3Q9UBP4 350 aa26.73■■□□□ 1.87
CDK9-202ENST00000421939 SEPT3Q9UH03 358 aa26.73■■□□□ 1.87
CDK9-202ENST00000421939 SLC31A1O15431 190 aa26.72■■□□□ 1.87
CDK9-202ENST00000421939 MFSD11O43934 449 aa26.72■■□□□ 1.87
CDK9-202ENST00000421939 CSNK1DP48730 415 aa26.72■■□□□ 1.87
CDK9-202ENST00000421939 RPS21P63220 83 aaKnown RBP26.72■■□□□ 1.87
CDK9-202ENST00000421939 LBRQ14739 615 aaKnown RBP26.72■■□□□ 1.87
CDK9-202ENST00000421939 ANKRD20A8PQ5CZ79 823 aa26.72■■□□□ 1.87
CDK9-202ENST00000421939 NCBP2-AS2Q69YL0 99 aa26.72■■□□□ 1.87
CDK9-202ENST00000421939 DEFB124Q8NES8 71 aa26.72■■□□□ 1.87
CDK9-202ENST00000421939 ITM2BQ9Y287 266 aa26.72■■□□□ 1.87
CDK9-202ENST00000421939 PCDHA13Q9Y5I0 950 aa26.72■■□□□ 1.87
CDK9-202ENST00000421939 TP53BP1Q12888 1972 aaPredicted RBP26.71■■□□□ 1.87
CDK9-202ENST00000421939 DOCK9Q9BZ29 2069 aa26.71■■□□□ 1.87
CDK9-202ENST00000421939 SOWAHDA6NJG2 315 aa26.71■■□□□ 1.87
CDK9-202ENST00000421939 NEMP1O14524 444 aa26.71■■□□□ 1.87
CDK9-202ENST00000421939 TSPAN6O43657 245 aa26.71■■□□□ 1.87
CDK9-202ENST00000421939 MAFKO60675 156 aa26.71■■□□□ 1.87
CDK9-202ENST00000421939 PAFAH1B3Q15102 231 aaKnown RBP26.71■■□□□ 1.87
CDK9-202ENST00000421939 SRLQ86TD4 932 aa26.71■■□□□ 1.87
CDK9-202ENST00000421939 ZSCAN30Q86W11 494 aa26.71■■□□□ 1.87
CDK9-202ENST00000421939 TMTC1Q8IUR5 882 aa26.71■■□□□ 1.87
CDK9-202ENST00000421939 MFSD2AQ8NA29 543 aa26.71■■□□□ 1.87
CDK9-202ENST00000421939 TMEM145Q8NBT3 493 aa26.71■■□□□ 1.87
CDK9-202ENST00000421939 RAPGEF5Q92565 580 aa26.71■■□□□ 1.87
CDK9-202ENST00000421939 FEM1CQ96JP0 617 aa26.71■■□□□ 1.87
CDK9-202ENST00000421939 PSKH2Q96QS6 385 aa26.71■■□□□ 1.87
CDK9-202ENST00000421939 TUBGCP5Q96RT8 1024 aa26.71■■□□□ 1.87
CDK9-202ENST00000421939 MYOCQ99972 504 aa26.71■■□□□ 1.87
CDK9-202ENST00000421939 SLC32A1Q9H598 525 aa26.71■■□□□ 1.87
CDK9-202ENST00000421939 TM7SF3Q9NS93 570 aa26.71■■□□□ 1.87
CDK9-202ENST00000421939 TMEM131Q92545 1883 aa26.7■■□□□ 1.87
CDK9-202ENST00000421939 GIPC1O14908 333 aa26.7■■□□□ 1.86
CDK9-202ENST00000421939 AREL1O15033 823 aa26.7■■□□□ 1.86
CDK9-202ENST00000421939 SPINT1O43278 529 aa26.7■■□□□ 1.86
CDK9-202ENST00000421939 PEX11BO96011 259 aa26.7■■□□□ 1.86
CDK9-202ENST00000421939 CEACAM1P13688 526 aa26.7■■□□□ 1.86
CDK9-202ENST00000421939 HNRNPA2B1P22626 353 aaKnown RBP26.7■■□□□ 1.86
CDK9-202ENST00000421939 AKT2P31751 481 aa26.7■■□□□ 1.86
CDK9-202ENST00000421939 SLC1A1P43005 524 aa26.7■■□□□ 1.86
CDK9-202ENST00000421939 NOP2P46087 812 aaKnown RBP26.7■■□□□ 1.86
CDK9-202ENST00000421939 RENBPP51606 427 aa26.7■■□□□ 1.86
CDK9-202ENST00000421939 HADHBP55084 474 aaKnown RBP26.7■■□□□ 1.86
CDK9-202ENST00000421939 SLC10A7Q0GE19 358 aa26.7■■□□□ 1.86
CDK9-202ENST00000421939 ZNF235Q14590 738 aa26.7■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms