RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 TMED1Q13445 227 aa3.59□□□□□ -1.83
SDCBPP3-201ENST00000419629 ALKBH1Q13686 389 aaKnown RBP3.59□□□□□ -1.83
SDCBPP3-201ENST00000419629 PLCB4Q15147 1175 aa3.59□□□□□ -1.83
SDCBPP3-201ENST00000419629 TIGD6Q17RP2 521 aa3.59□□□□□ -1.83
SDCBPP3-201ENST00000419629 GRAMD1BQ3KR37 738 aa3.59□□□□□ -1.83
SDCBPP3-201ENST00000419629 ALG10Q5BKT4 473 aa3.59□□□□□ -1.83
SDCBPP3-201ENST00000419629 ALG10BQ5I7T1 473 aa3.59□□□□□ -1.83
SDCBPP3-201ENST00000419629 C6orf10Q5SRN2 563 aa3.59□□□□□ -1.83
SDCBPP3-201ENST00000419629 ANKRD45Q5TZF3 282 aa3.59□□□□□ -1.83
SDCBPP3-201ENST00000419629 LIN54Q6MZP7 749 aa3.59□□□□□ -1.83
SDCBPP3-201ENST00000419629 PDXDC1Q6P996 788 aa3.59□□□□□ -1.83
SDCBPP3-201ENST00000419629 SARM1Q6SZW1 724 aa3.59□□□□□ -1.83
SDCBPP3-201ENST00000419629 CHD1LQ86WJ1 897 aa3.59□□□□□ -1.83
SDCBPP3-201ENST00000419629 PLA2G4DQ86XP0 818 aa3.59□□□□□ -1.83
SDCBPP3-201ENST00000419629 APLFQ8IW19 511 aaPredicted RBP3.59□□□□□ -1.83
SDCBPP3-201ENST00000419629 GALNT15Q8N3T1 639 aa3.59□□□□□ -1.83
SDCBPP3-201ENST00000419629 MYCT1Q8N699 235 aa3.59□□□□□ -1.83
SDCBPP3-201ENST00000419629 OR1N1Q8NGS0 311 aa3.59□□□□□ -1.83
SDCBPP3-201ENST00000419629 TDRD7Q8NHU6 1098 aaKnown RBP3.59□□□□□ -1.83
SDCBPP3-201ENST00000419629 SCAMP5Q8TAC9 235 aa3.59□□□□□ -1.83
SDCBPP3-201ENST00000419629 STT3BQ8TCJ2 826 aa3.59□□□□□ -1.83
SDCBPP3-201ENST00000419629 ATP2A3Q93084 1043 aa3.59□□□□□ -1.83
SDCBPP3-201ENST00000419629 SDCCAG3Q96C92 435 aa3.59□□□□□ -1.83
SDCBPP3-201ENST00000419629 DTNBP1Q96EV8 351 aa3.59□□□□□ -1.83
SDCBPP3-201ENST00000419629 ADAD1Q96M93 576 aaKnown RBP3.59□□□□□ -1.83
SDCBPP3-201ENST00000419629 MEIS3Q99687 375 aa3.59□□□□□ -1.83
SDCBPP3-201ENST00000419629 WDR83Q9BRX9 315 aaKnown RBP3.59□□□□□ -1.83
SDCBPP3-201ENST00000419629 FUCA2Q9BTY2 467 aa3.59□□□□□ -1.83
SDCBPP3-201ENST00000419629 MMTAG2Q9BU76 263 aaKnown RBP3.59□□□□□ -1.83
SDCBPP3-201ENST00000419629 DDX23Q9BUQ8 820 aaKnown RBP3.59□□□□□ -1.83
SDCBPP3-201ENST00000419629 UBA5Q9GZZ9 404 aa3.59□□□□□ -1.83
SDCBPP3-201ENST00000419629 IQCGQ9H095 443 aaKnown RBP3.59□□□□□ -1.83
SDCBPP3-201ENST00000419629 MYLK2Q9H1R3 596 aa3.59□□□□□ -1.83
SDCBPP3-201ENST00000419629 SEMA4BQ9NPR2 832 aaPredicted RBP3.59□□□□□ -1.83
SDCBPP3-201ENST00000419629 THSD1Q9NS62 852 aa3.59□□□□□ -1.83
SDCBPP3-201ENST00000419629 VPS18Q9P253 973 aa3.59□□□□□ -1.83
SDCBPP3-201ENST00000419629 UTS2RQ9UKP6 389 aa3.59□□□□□ -1.83
SDCBPP3-201ENST00000419629 ODF2LQ9ULJ1 636 aa3.59□□□□□ -1.83
SDCBPP3-201ENST00000419629 LAMP3Q9UQV4 416 aa3.59□□□□□ -1.83
SDCBPP3-201ENST00000419629 PCDHA10Q9Y5I2 948 aa3.59□□□□□ -1.83
SDCBPP3-201ENST00000419629 MYOM2P54296 1465 aa3.59□□□□□ -1.84
SDCBPP3-201ENST00000419629 GOLGA6L9A6NEM1 432 aa3.58□□□□□ -1.84
SDCBPP3-201ENST00000419629 KCNJ18B7U540 433 aa3.58□□□□□ -1.84
SDCBPP3-201ENST00000419629 E7EVH7 732 aa3.58□□□□□ -1.84
SDCBPP3-201ENST00000419629 H0Y3Z8 333 aa3.58□□□□□ -1.84
SDCBPP3-201ENST00000419629 HLA-DQA2P01906 255 aa3.58□□□□□ -1.84
SDCBPP3-201ENST00000419629 NGFRP08138 427 aa3.58□□□□□ -1.84
SDCBPP3-201ENST00000419629 PPP2R1AP30153 589 aa3.58□□□□□ -1.84
SDCBPP3-201ENST00000419629 TRAPPC10P48553 1259 aa3.58□□□□□ -1.84
SDCBPP3-201ENST00000419629 RBM5P52756 815 aaKnown RBP eCLIP3.58□□□□□ -1.84
SDCBPP3-201ENST00000419629 PNLIPRP1P54315 467 aa3.58□□□□□ -1.84
SDCBPP3-201ENST00000419629 TMF1P82094 1093 aa3.58□□□□□ -1.84
SDCBPP3-201ENST00000419629 GAD2Q05329 585 aa3.58□□□□□ -1.84
SDCBPP3-201ENST00000419629 GOLGA8FQ08AF8 430 aa3.58□□□□□ -1.84
SDCBPP3-201ENST00000419629 PMPCAQ10713 525 aa3.58□□□□□ -1.84
SDCBPP3-201ENST00000419629 CUL4AQ13619 759 aa3.58□□□□□ -1.84
SDCBPP3-201ENST00000419629 TUBB2AQ13885 445 aa3.58□□□□□ -1.84
SDCBPP3-201ENST00000419629 PDIA5Q14554 519 aa3.58□□□□□ -1.84
SDCBPP3-201ENST00000419629 PGM5Q15124 567 aa3.58□□□□□ -1.84
SDCBPP3-201ENST00000419629 INPP5JQ15735 1006 aaPredicted RBP3.58□□□□□ -1.84
SDCBPP3-201ENST00000419629 GALNTL6Q49A17 601 aa3.58□□□□□ -1.84
SDCBPP3-201ENST00000419629 FAM83BQ5T0W9 1011 aa3.58□□□□□ -1.84
SDCBPP3-201ENST00000419629 C1QTNF12Q5T7M4 302 aa3.58□□□□□ -1.84
SDCBPP3-201ENST00000419629 WLSQ5T9L3 541 aa3.58□□□□□ -1.84
SDCBPP3-201ENST00000419629 TTC19Q6DKK2 380 aaPredicted RBP3.58□□□□□ -1.84
SDCBPP3-201ENST00000419629 RRAGAQ7L523 313 aa3.58□□□□□ -1.84
SDCBPP3-201ENST00000419629 TRIM74Q86UV6 250 aa3.58□□□□□ -1.84
SDCBPP3-201ENST00000419629 TRIM73Q86UV7 250 aa3.58□□□□□ -1.84
SDCBPP3-201ENST00000419629 IQCA1Q86XH1 822 aa3.58□□□□□ -1.84
SDCBPP3-201ENST00000419629 FOXP4Q8IVH2 680 aaPredicted RBP3.58□□□□□ -1.84
SDCBPP3-201ENST00000419629 MFN1Q8IWA4 741 aa3.58□□□□□ -1.84
SDCBPP3-201ENST00000419629 LRRC8AQ8IWT6 810 aa3.58□□□□□ -1.84
SDCBPP3-201ENST00000419629 FAM185AQ8N0U4 392 aa3.58□□□□□ -1.84
SDCBPP3-201ENST00000419629 CCAR2Q8N163 923 aaKnown RBP3.58□□□□□ -1.84
SDCBPP3-201ENST00000419629 TMTC2Q8N394 836 aa3.58□□□□□ -1.84
SDCBPP3-201ENST00000419629 TMEM199Q8N511 208 aa3.58□□□□□ -1.84
SDCBPP3-201ENST00000419629 B4GALNT2Q8NHY0 566 aa3.58□□□□□ -1.84
SDCBPP3-201ENST00000419629 MAGEC3Q8TD91 643 aa3.58□□□□□ -1.84
SDCBPP3-201ENST00000419629 CLEC4CQ8WTT0 213 aa3.58□□□□□ -1.84
SDCBPP3-201ENST00000419629 THAP4Q8WY91 577 aa3.58□□□□□ -1.84
SDCBPP3-201ENST00000419629 SAAL1Q96ER3 474 aa3.58□□□□□ -1.84
SDCBPP3-201ENST00000419629 RSRC1Q96IZ7 334 aaKnown RBP3.58□□□□□ -1.84
SDCBPP3-201ENST00000419629 RMDN2Q96LZ7 410 aa3.58□□□□□ -1.84
SDCBPP3-201ENST00000419629 ARPC5LQ9BPX5 153 aa3.58□□□□□ -1.84
SDCBPP3-201ENST00000419629 FAM167BQ9BTA0 163 aa3.58□□□□□ -1.84
SDCBPP3-201ENST00000419629 TUBB2BQ9BVA1 445 aa3.58□□□□□ -1.84
SDCBPP3-201ENST00000419629 TRIM31Q9BZY9 425 aa3.58□□□□□ -1.84
SDCBPP3-201ENST00000419629 TXNRD2Q9NNW7 524 aa3.58□□□□□ -1.84
SDCBPP3-201ENST00000419629 FZD3Q9NPG1 666 aa3.58□□□□□ -1.84
SDCBPP3-201ENST00000419629 RRP7BPQ9NSQ0 103 aa3.58□□□□□ -1.84
SDCBPP3-201ENST00000419629 SELENONQ9NZV5 590 aa3.58□□□□□ -1.84
SDCBPP3-201ENST00000419629 KIF17Q9P2E2 1029 aa3.58□□□□□ -1.84
SDCBPP3-201ENST00000419629 GRHPRQ9UBQ7 328 aa3.58□□□□□ -1.84
SDCBPP3-201ENST00000419629 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.58□□□□□ -1.84
SDCBPP3-201ENST00000419629 DTX4Q9Y2E6 619 aa3.58□□□□□ -1.84
SDCBPP3-201ENST00000419629 RTL1A6NKG5 1358 aa3.58□□□□□ -1.84
SDCBPP3-201ENST00000419629 POLR3AO14802 1390 aaPredicted RBP3.58□□□□□ -1.84
SDCBPP3-201ENST00000419629 MAP3K5Q99683 1374 aa3.58□□□□□ -1.84
SDCBPP3-201ENST00000419629 GOLGA6L7A0A1B0GV03 622 aa3.57□□□□□ -1.84
SDCBPP3-201ENST00000419629 GOLGA6L19H0YKK7 550 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms