RNA–Protein interactions for RNA: ENST00000417946.5

CPS1-202, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-202ENST00000417946 ATP13A1Q9HD20 1204 aa6.95□□□□□ -1.3
CPS1-202ENST00000417946 EIF2B3Q9NR50 452 aaKnown RBP6.95□□□□□ -1.3
CPS1-202ENST00000417946 RAB6BQ9NRW1 208 aa6.95□□□□□ -1.3
CPS1-202ENST00000417946 ABCB8Q9NUT2 735 aa6.95□□□□□ -1.3
CPS1-202ENST00000417946 DNAJC17Q9NVM6 304 aaKnown RBP6.95□□□□□ -1.3
CPS1-202ENST00000417946 RBM22Q9NW64 420 aaKnown RBP eCLIP6.95□□□□□ -1.3
CPS1-202ENST00000417946 KLHL8Q9P2G9 620 aaPredicted RBP6.95□□□□□ -1.3
CPS1-202ENST00000417946 TRHDEQ9UKU6 1024 aa6.95□□□□□ -1.3
CPS1-202ENST00000417946 NUMBLQ9Y6R0 609 aa6.95□□□□□ -1.3
CPS1-202ENST00000417946 SPTBN5Q9NRC6 3674 aaKnown RBP6.94□□□□□ -1.3
CPS1-202ENST00000417946 CXorf51AA0A1B0GTR3 108 aa6.94□□□□□ -1.3
CPS1-202ENST00000417946 CBX4O00257 560 aa6.94□□□□□ -1.3
CPS1-202ENST00000417946 ZNF189O75820 626 aaPredicted RBP6.94□□□□□ -1.3
CPS1-202ENST00000417946 TMCC1O94876 653 aa6.94□□□□□ -1.3
CPS1-202ENST00000417946 AP2A1O95782 977 aa6.94□□□□□ -1.3
CPS1-202ENST00000417946 MT-CYBP00156 380 aaPredicted RBP6.94□□□□□ -1.3
CPS1-202ENST00000417946 C1QAP02745 245 aa6.94□□□□□ -1.3
CPS1-202ENST00000417946 TUBBP07437 444 aa6.94□□□□□ -1.3
CPS1-202ENST00000417946 PABPC1P11940 636 aaKnown RBP6.94□□□□□ -1.3
CPS1-202ENST00000417946 PSMC3P17980 439 aa6.94□□□□□ -1.3
CPS1-202ENST00000417946 SP100P23497 879 aaPredicted RBP6.94□□□□□ -1.3
CPS1-202ENST00000417946 FDFT1P37268 417 aa6.94□□□□□ -1.3
CPS1-202ENST00000417946 ETFBP38117 255 aa6.94□□□□□ -1.3
CPS1-202ENST00000417946 MMP13P45452 471 aa6.94□□□□□ -1.3
CPS1-202ENST00000417946 STK19P49842 368 aaPredicted RBP6.94□□□□□ -1.3
CPS1-202ENST00000417946 SERPINH1P50454 418 aaKnown RBP6.94□□□□□ -1.3
CPS1-202ENST00000417946 MAXP61244 160 aa6.94□□□□□ -1.3
CPS1-202ENST00000417946 BASP1P80723 227 aaKnown RBP6.94□□□□□ -1.3
CPS1-202ENST00000417946 MTM1Q13496 603 aa6.94□□□□□ -1.3
CPS1-202ENST00000417946 SPARCL1Q14515 664 aa6.94□□□□□ -1.3
CPS1-202ENST00000417946 HLTFQ14527 1009 aaKnown RBP eCLIP6.94□□□□□ -1.3
CPS1-202ENST00000417946 LBRQ14739 615 aaKnown RBP6.94□□□□□ -1.3
CPS1-202ENST00000417946 LEXMQ3ZCV2 418 aa6.94□□□□□ -1.3
CPS1-202ENST00000417946 IL31Q6EBC2 164 aa6.94□□□□□ -1.3
CPS1-202ENST00000417946 C4orf22Q6V702 233 aa6.94□□□□□ -1.3
CPS1-202ENST00000417946 EP400NLQ6ZTU2 488 aa6.94□□□□□ -1.3
CPS1-202ENST00000417946 PID1Q7Z2X4 250 aa6.94□□□□□ -1.3
CPS1-202ENST00000417946 RELL1Q8IUW5 271 aa6.94□□□□□ -1.3
CPS1-202ENST00000417946 SORCS1Q8WY21 1168 aa6.94□□□□□ -1.3
CPS1-202ENST00000417946 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.94□□□□□ -1.3
CPS1-202ENST00000417946 EXOC4Q96A65 974 aa6.94□□□□□ -1.3
CPS1-202ENST00000417946 LRRC45Q96CN5 670 aa6.94□□□□□ -1.3
CPS1-202ENST00000417946 SERPINB12Q96P63 405 aa6.94□□□□□ -1.3
CPS1-202ENST00000417946 TRIB3Q96RU7 358 aa6.94□□□□□ -1.3
CPS1-202ENST00000417946 TRIM56Q9BRZ2 755 aaKnown RBP6.94□□□□□ -1.3
CPS1-202ENST00000417946 FUT8Q9BYC5 575 aa6.94□□□□□ -1.3
CPS1-202ENST00000417946 SLC2A11Q9BYW1 496 aa6.94□□□□□ -1.3
CPS1-202ENST00000417946 MUC3BQ9H195 1237 aa6.94□□□□□ -1.3
CPS1-202ENST00000417946 SLC25A51Q9H1U9 297 aa6.94□□□□□ -1.3
CPS1-202ENST00000417946 ECT2Q9H8V3 914 aa6.94□□□□□ -1.3
CPS1-202ENST00000417946 NT5MQ9NPB1 228 aa6.94□□□□□ -1.3
CPS1-202ENST00000417946 PRDM6Q9NQX0 595 aa6.94□□□□□ -1.3
CPS1-202ENST00000417946 DONSONQ9NYP3 566 aa6.94□□□□□ -1.3
CPS1-202ENST00000417946 GTSE1Q9NYZ3 720 aa6.94□□□□□ -1.3
CPS1-202ENST00000417946 KIAA1522Q9P206 1035 aaPredicted RBP6.94□□□□□ -1.3
CPS1-202ENST00000417946 UBA2Q9UBT2 640 aaPredicted RBP6.94□□□□□ -1.3
CPS1-202ENST00000417946 LIMD1Q9UGP4 676 aa6.94□□□□□ -1.3
CPS1-202ENST00000417946 RSPH14Q9UHP6 348 aa6.94□□□□□ -1.3
CPS1-202ENST00000417946 ANAPC5Q9UJX4 755 aa6.94□□□□□ -1.3
CPS1-202ENST00000417946 GGA2Q9UJY4 613 aa6.94□□□□□ -1.3
CPS1-202ENST00000417946 VPS28Q9UK41 221 aa6.94□□□□□ -1.3
CPS1-202ENST00000417946 SLC27A6Q9Y2P4 619 aa6.94□□□□□ -1.3
CPS1-202ENST00000417946 ZNF106Q9H2Y7 1883 aaKnown RBP6.94□□□□□ -1.3
CPS1-202ENST00000417946 PRRT4C9JH25 899 aa6.93□□□□□ -1.3
CPS1-202ENST00000417946 GOLGA8MH3BSY2 632 aa6.93□□□□□ -1.3
CPS1-202ENST00000417946 MAP2K7O14733 419 aa6.93□□□□□ -1.3
CPS1-202ENST00000417946 INSIG1O15503 277 aa6.93□□□□□ -1.3
CPS1-202ENST00000417946 USP12O75317 370 aa6.93□□□□□ -1.3
CPS1-202ENST00000417946 AVILO75366 819 aa6.93□□□□□ -1.3
CPS1-202ENST00000417946 STK10O94804 968 aaKnown RBP6.93□□□□□ -1.3
CPS1-202ENST00000417946 NFATC1O95644 943 aa6.93□□□□□ -1.3
CPS1-202ENST00000417946 PRLP01236 227 aa6.93□□□□□ -1.3
CPS1-202ENST00000417946 CYBBP04839 570 aa6.93□□□□□ -1.3
CPS1-202ENST00000417946 APRTP07741 180 aa6.93□□□□□ -1.3
CPS1-202ENST00000417946 ATXN1LP0C7T5 689 aaKnown RBP6.93□□□□□ -1.3
CPS1-202ENST00000417946 SRCP12931 536 aa6.93□□□□□ -1.3
CPS1-202ENST00000417946 MCM3P25205 808 aa6.93□□□□□ -1.3
CPS1-202ENST00000417946 GJA4P35212 333 aa6.93□□□□□ -1.3
CPS1-202ENST00000417946 CHRNA4P43681 627 aa6.93□□□□□ -1.3
CPS1-202ENST00000417946 SOX9P48436 509 aa6.93□□□□□ -1.3
CPS1-202ENST00000417946 RENBPP51606 427 aa6.93□□□□□ -1.3
CPS1-202ENST00000417946 GPX6P59796 221 aa6.93□□□□□ -1.3
CPS1-202ENST00000417946 CAV1Q03135 178 aa6.93□□□□□ -1.3
CPS1-202ENST00000417946 CALCOCO2Q13137 446 aa6.93□□□□□ -1.3
CPS1-202ENST00000417946 SLC12A1Q13621 1099 aa6.93□□□□□ -1.3
CPS1-202ENST00000417946 RUNX3Q13761 415 aa6.93□□□□□ -1.3
CPS1-202ENST00000417946 RFTN1Q14699 578 aaPredicted RBP6.93□□□□□ -1.3
CPS1-202ENST00000417946 SMAD2Q15796 467 aaKnown RBP6.93□□□□□ -1.3
CPS1-202ENST00000417946 QPCTQ16769 361 aa6.93□□□□□ -1.3
CPS1-202ENST00000417946 AAK1Q2M2I8 961 aa6.93□□□□□ -1.3
CPS1-202ENST00000417946 ANO4Q32M45 955 aa6.93□□□□□ -1.3
CPS1-202ENST00000417946 INO80DQ53TQ3 878 aaPredicted RBP6.93□□□□□ -1.3
CPS1-202ENST00000417946 C4orf48Q5BLP8 95 aa6.93□□□□□ -1.3
CPS1-202ENST00000417946 DGKKQ5KSL6 1271 aa6.93□□□□□ -1.3
CPS1-202ENST00000417946 ATXN7L2Q5T6C5 722 aaPredicted RBP6.93□□□□□ -1.3
CPS1-202ENST00000417946 MARC1Q5VT66 337 aa6.93□□□□□ -1.3
CPS1-202ENST00000417946 ITPRIPL1Q6GPH6 555 aa6.93□□□□□ -1.3
CPS1-202ENST00000417946 MICALCLQ6ZW33 695 aa6.93□□□□□ -1.3
CPS1-202ENST00000417946 RNF135Q8IUD6 432 aa6.93□□□□□ -1.3
CPS1-202ENST00000417946 MPP5Q8N3R9 675 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms